RNA–Protein interactions for RNA: ENST00000371447.3

PDE6C-201, Transcript of phosphodiesterase 6C, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDE6C, Length 3,307 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6C-201ENST00000371447 CHGBP05060 677 aa14.26□□□□□ -0.13
PDE6C-201ENST00000371447 PI4K2BQ8TCG2 481 aa14.26□□□□□ -0.13
PDE6C-201ENST00000371447 RBM27Q9P2N5 1060 aaKnown RBP14.26□□□□□ -0.13
PDE6C-201ENST00000371447 RAB11FIP3O75154 756 aa14.25□□□□□ -0.13
PDE6C-201ENST00000371447 DDIT3P35638 169 aa14.25□□□□□ -0.13
PDE6C-201ENST00000371447 GAS2L3Q86XJ1 694 aa14.25□□□□□ -0.13
PDE6C-201ENST00000371447 LINS1Q8NG48 757 aa14.25□□□□□ -0.13
PDE6C-201ENST00000371447 TAOK2Q9UL54 1235 aa14.25□□□□□ -0.13
PDE6C-201ENST00000371447 A0A087WZG4 1122 aa14.25□□□□□ -0.13
PDE6C-201ENST00000371447 POLA2Q14181 598 aa14.25□□□□□ -0.13
PDE6C-201ENST00000371447 PRPF40BQ6NWY9 871 aaKnown RBP14.25□□□□□ -0.13
PDE6C-201ENST00000371447 RASEFQ8IZ41 740 aa14.25□□□□□ -0.13
PDE6C-201ENST00000371447 EAF2Q96CJ1 260 aaPredicted RBP14.25□□□□□ -0.13
PDE6C-201ENST00000371447 RGPD2P0DJD1 1756 aa14.25□□□□□ -0.13
PDE6C-201ENST00000371447 PDIA6Q15084 440 aa14.25□□□□□ -0.13
PDE6C-201ENST00000371447 FAM227BQ96M60 508 aa14.25□□□□□ -0.13
PDE6C-201ENST00000371447 DNAJC2Q99543 621 aaKnown RBP14.25□□□□□ -0.13
PDE6C-201ENST00000371447 SALL3Q9BXA9 1300 aa14.24□□□□□ -0.13
PDE6C-201ENST00000371447 KAZALD1Q96I82 304 aa14.24□□□□□ -0.13
PDE6C-201ENST00000371447 NFAT5O94916 1531 aa14.24□□□□□ -0.13
PDE6C-201ENST00000371447 L1TD1Q5T7N2 865 aaKnown RBP14.24□□□□□ -0.13
PDE6C-201ENST00000371447 NEUROD6Q96NK8 337 aa14.24□□□□□ -0.13
PDE6C-201ENST00000371447 CIZ1Q9ULV3 898 aaPredicted RBP14.24□□□□□ -0.13
PDE6C-201ENST00000371447 LTN1O94822 1766 aa14.24□□□□□ -0.13
PDE6C-201ENST00000371447 ZNF335Q9H4Z2 1342 aaPredicted RBP14.24□□□□□ -0.13
PDE6C-201ENST00000371447 FSD1Q9BTV5 496 aa14.23□□□□□ -0.13
PDE6C-201ENST00000371447 ECHDC1Q9NTX5 307 aa14.23□□□□□ -0.13
PDE6C-201ENST00000371447 HOXB7P09629 217 aa14.23□□□□□ -0.13
PDE6C-201ENST00000371447 SNRPA1P09661 255 aaKnown RBP14.23□□□□□ -0.13
PDE6C-201ENST00000371447 PTH1RQ03431 593 aa14.23□□□□□ -0.13
PDE6C-201ENST00000371447 LARP1Q6PKG0 1096 aaKnown RBP14.23□□□□□ -0.13
PDE6C-201ENST00000371447 SASH1O94885 1247 aa14.23□□□□□ -0.13
PDE6C-201ENST00000371447 CASTP20810 708 aaKnown RBP14.23□□□□□ -0.13
PDE6C-201ENST00000371447 HSP90AB4PQ58FF6 505 aa14.23□□□□□ -0.13
PDE6C-201ENST00000371447 STAP2Q9UGK3 403 aa14.23□□□□□ -0.13
PDE6C-201ENST00000371447 TTLL7Q6ZT98 887 aa14.22□□□□□ -0.13
PDE6C-201ENST00000371447 NEURL1BA8MQ27 555 aa14.22□□□□□ -0.13
PDE6C-201ENST00000371447 GLRX3O76003 335 aaKnown RBP14.22□□□□□ -0.13
PDE6C-201ENST00000371447 BRINP3Q76B58 766 aa14.22□□□□□ -0.13
PDE6C-201ENST00000371447 FMNL2Q96PY5 1086 aa14.22□□□□□ -0.13
PDE6C-201ENST00000371447 CHMP4AQ9BY43 222 aa14.22□□□□□ -0.13
PDE6C-201ENST00000371447 PPFIA3O75145 1194 aa14.21□□□□□ -0.13
PDE6C-201ENST00000371447 NUCB2P80303 420 aa14.21□□□□□ -0.13
PDE6C-201ENST00000371447 GCKRQ14397 625 aa14.21□□□□□ -0.13
PDE6C-201ENST00000371447 SLFNL1Q499Z3 407 aa14.21□□□□□ -0.13
PDE6C-201ENST00000371447 GPATCH3Q96I76 525 aa14.21□□□□□ -0.13
PDE6C-201ENST00000371447 JAKMIP1Q96N16 626 aaKnown RBP14.21□□□□□ -0.13
PDE6C-201ENST00000371447 ALDH1L1O75891 902 aa14.21□□□□□ -0.14
PDE6C-201ENST00000371447 DCAF5Q96JK2 942 aa14.21□□□□□ -0.14
PDE6C-201ENST00000371447 GRPEL1Q9HAV7 217 aa14.21□□□□□ -0.14
PDE6C-201ENST00000371447 CHD2O14647 1828 aaKnown RBP14.21□□□□□ -0.14
PDE6C-201ENST00000371447 ZDHHC9Q9Y397 364 aa14.2□□□□□ -0.14
PDE6C-201ENST00000371447 SGSM2O43147 1006 aa14.2□□□□□ -0.14
PDE6C-201ENST00000371447 COL9A3Q14050 684 aaPredicted RBP14.2□□□□□ -0.14
PDE6C-201ENST00000371447 ADCK5Q3MIX3 580 aa14.2□□□□□ -0.14
PDE6C-201ENST00000371447 LMBR1LQ6UX01 489 aa14.2□□□□□ -0.14
PDE6C-201ENST00000371447 ZCRB1Q8TBF4 217 aaKnown RBP14.2□□□□□ -0.14
PDE6C-201ENST00000371447 ZNF594Q96JF6 807 aaPredicted RBP14.2□□□□□ -0.14
PDE6C-201ENST00000371447 SLAIN2Q9P270 581 aa14.2□□□□□ -0.14
PDE6C-201ENST00000371447 MEGF6O75095 1541 aa14.2□□□□□ -0.14
PDE6C-201ENST00000371447 TFCP2Q12800 502 aa14.2□□□□□ -0.14
PDE6C-201ENST00000371447 FAM177BA6PVY3 158 aa14.19□□□□□ -0.14
PDE6C-201ENST00000371447 NECAB1Q8N987 351 aa14.19□□□□□ -0.14
PDE6C-201ENST00000371447 SNX14Q9Y5W7 946 aa14.19□□□□□ -0.14
PDE6C-201ENST00000371447 STK3Q13188 491 aa14.19□□□□□ -0.14
PDE6C-201ENST00000371447 NSFL1CQ9UNZ2 370 aaKnown RBP14.19□□□□□ -0.14
PDE6C-201ENST00000371447 NMIQ13287 307 aaPredicted RBP14.18□□□□□ -0.14
PDE6C-201ENST00000371447 DDX46Q7L014 1031 aaKnown RBP14.18□□□□□ -0.14
PDE6C-201ENST00000371447 CCDC83Q8IWF9 413 aa14.18□□□□□ -0.14
PDE6C-201ENST00000371447 RNF214Q8ND24 703 aa14.18□□□□□ -0.14
PDE6C-201ENST00000371447 AK2P54819 239 aa14.18□□□□□ -0.14
PDE6C-201ENST00000371447 CCDC129Q6ZRS4 1044 aa14.18□□□□□ -0.14
PDE6C-201ENST00000371447 METTL22Q9BUU2 404 aaPredicted RBP14.18□□□□□ -0.14
PDE6C-201ENST00000371447 NAP1L2Q9ULW6 460 aaPredicted RBP14.18□□□□□ -0.14
PDE6C-201ENST00000371447 KDM6AO15550 1401 aaPredicted RBP14.18□□□□□ -0.14
PDE6C-201ENST00000371447 NCOA3Q9Y6Q9 1424 aa14.18□□□□□ -0.14
PDE6C-201ENST00000371447 SPATA31A3Q5VYP0 1347 aa14.18□□□□□ -0.14
PDE6C-201ENST00000371447 TIMM10P62072 90 aa14.18□□□□□ -0.14
PDE6C-201ENST00000371447 FOSBP53539 338 aa14.17□□□□□ -0.14
PDE6C-201ENST00000371447 SEC62Q99442 399 aaKnown RBP14.17□□□□□ -0.14
PDE6C-201ENST00000371447 A0A0D9SFI3 127 aa14.17□□□□□ -0.14
PDE6C-201ENST00000371447 NBPF26B4DH59 902 aa14.17□□□□□ -0.14
PDE6C-201ENST00000371447 GPTP24298 496 aa14.17□□□□□ -0.14
PDE6C-201ENST00000371447 HSPA4P34932 840 aa14.17□□□□□ -0.14
PDE6C-201ENST00000371447 NBPF14Q5TI25 921 aa14.17□□□□□ -0.14
PDE6C-201ENST00000371447 NBPF10Q6P3W6 841 aaKnown RBP14.17□□□□□ -0.14
PDE6C-201ENST00000371447 NBPF15Q8N660 670 aa14.17□□□□□ -0.14
PDE6C-201ENST00000371447 DBNDD2Q9BQY9 259 aa14.17□□□□□ -0.14
PDE6C-201ENST00000371447 TAF6LQ9Y6J9 622 aa14.17□□□□□ -0.14
PDE6C-201ENST00000371447 MARF1Q9Y4F3 1742 aaKnown RBP14.16□□□□□ -0.14
PDE6C-201ENST00000371447 LARGE1O95461 756 aa14.16□□□□□ -0.14
PDE6C-201ENST00000371447 MPNDQ8N594 471 aa14.16□□□□□ -0.14
PDE6C-201ENST00000371447 LSG1Q9H089 658 aaKnown RBP14.16□□□□□ -0.14
PDE6C-201ENST00000371447 MST1RQ04912 1400 aa14.16□□□□□ -0.14
PDE6C-201ENST00000371447 ERC1Q8IUD2 1116 aa14.16□□□□□ -0.14
PDE6C-201ENST00000371447 CWC22Q9HCG8 908 aaKnown RBP14.16□□□□□ -0.14
PDE6C-201ENST00000371447 VPS37CA5D8V6 355 aaPredicted RBP14.15□□□□□ -0.14
PDE6C-201ENST00000371447 RUFY2Q8WXA3 655 aa14.15□□□□□ -0.14
PDE6C-201ENST00000371447 LRRC2Q9BYS8 371 aa14.15□□□□□ -0.14
PDE6C-201ENST00000371447 SNRKQ9NRH2 765 aa14.15□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms