RNA–Protein interactions for RNA: ENST00000370952.3

LRRC40-201, Transcript of leucine rich repeat containing 40, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LRRC40, Length 2,884 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC40-201ENST00000370952 PDRG1Q9NUG6 133 aa11.48□□□□□ -0.57
LRRC40-201ENST00000370952 MORC2Q9Y6X9 1032 aaPredicted RBP11.48□□□□□ -0.57
LRRC40-201ENST00000370952 AATKQ6ZMQ8 1374 aa11.48□□□□□ -0.57
LRRC40-201ENST00000370952 RAPGEF3O95398 923 aa11.48□□□□□ -0.57
LRRC40-201ENST00000370952 KRT85P78386 507 aa11.48□□□□□ -0.57
LRRC40-201ENST00000370952 PTH1RQ03431 593 aa11.48□□□□□ -0.57
LRRC40-201ENST00000370952 COL9A3Q14050 684 aaPredicted RBP11.48□□□□□ -0.57
LRRC40-201ENST00000370952 TERF2Q15554 542 aa11.48□□□□□ -0.57
LRRC40-201ENST00000370952 ME3Q16798 604 aa11.48□□□□□ -0.57
LRRC40-201ENST00000370952 HSP90AB2PQ58FF8 381 aa11.48□□□□□ -0.57
LRRC40-201ENST00000370952 LARP1BQ659C4 914 aaKnown RBP11.48□□□□□ -0.57
LRRC40-201ENST00000370952 CEP135Q66GS9 1140 aa11.48□□□□□ -0.57
LRRC40-201ENST00000370952 CLIP2Q9UDT6 1046 aa11.48□□□□□ -0.57
LRRC40-201ENST00000370952 ZNF215Q9UL58 517 aaPredicted RBP11.48□□□□□ -0.57
LRRC40-201ENST00000370952 CRB1P82279 1406 aa11.48□□□□□ -0.57
LRRC40-201ENST00000370952 PLA2G4DQ86XP0 818 aa11.47□□□□□ -0.57
LRRC40-201ENST00000370952 SLC52A1Q9NWF4 448 aa11.47□□□□□ -0.57
LRRC40-201ENST00000370952 STAG3Q9UJ98 1225 aa11.47□□□□□ -0.57
LRRC40-201ENST00000370952 GOLGA6L4A6NEF3 574 aa11.47□□□□□ -0.57
LRRC40-201ENST00000370952 FBXO31Q5XUX0 539 aaPredicted RBP11.47□□□□□ -0.57
LRRC40-201ENST00000370952 PAXBP1Q9Y5B6 917 aa11.47□□□□□ -0.57
LRRC40-201ENST00000370952 KRT222Q8N1A0 295 aa11.46□□□□□ -0.57
LRRC40-201ENST00000370952 TCEANC2Q96MN5 208 aa11.46□□□□□ -0.57
LRRC40-201ENST00000370952 SOS1Q07889 1333 aaPredicted RBP11.46□□□□□ -0.57
LRRC40-201ENST00000370952 UBTFL1P0CB47 393 aaPredicted RBP11.46□□□□□ -0.57
LRRC40-201ENST00000370952 ZNF165P49910 485 aa11.46□□□□□ -0.57
LRRC40-201ENST00000370952 PPP1R42Q7Z4L9 355 aa11.46□□□□□ -0.57
LRRC40-201ENST00000370952 CNTROBQ8N137 903 aa11.46□□□□□ -0.57
LRRC40-201ENST00000370952 RHPN1Q8TCX5 695 aa11.46□□□□□ -0.57
LRRC40-201ENST00000370952 USP44Q9H0E7 712 aa11.46□□□□□ -0.57
LRRC40-201ENST00000370952 TRMT1Q9NXH9 659 aaKnown RBP11.46□□□□□ -0.57
LRRC40-201ENST00000370952 ELF2Q15723 593 aa11.46□□□□□ -0.58
LRRC40-201ENST00000370952 TMEM131LA2VDJ0 1609 aa11.45□□□□□ -0.58
LRRC40-201ENST00000370952 RIMS1Q86UR5 1692 aaKnown RBP11.45□□□□□ -0.58
LRRC40-201ENST00000370952 WASLO00401 505 aaPredicted RBP11.45□□□□□ -0.58
LRRC40-201ENST00000370952 EPB41L2O43491 1005 aaKnown RBP11.45□□□□□ -0.58
LRRC40-201ENST00000370952 MTHFSDQ2M296 383 aaKnown RBP11.45□□□□□ -0.58
LRRC40-201ENST00000370952 FBXO38Q6PIJ6 1188 aa11.45□□□□□ -0.58
LRRC40-201ENST00000370952 ZNF397Q8NF99 534 aaPredicted RBP11.45□□□□□ -0.58
LRRC40-201ENST00000370952 NUDT16Q96DE0 195 aaKnown RBP11.45□□□□□ -0.58
LRRC40-201ENST00000370952 TPCN1Q9ULQ1 816 aa11.45□□□□□ -0.58
LRRC40-201ENST00000370952 CYP46A1Q9Y6A2 500 aa11.45□□□□□ -0.58
LRRC40-201ENST00000370952 AOX1Q06278 1338 aa11.45□□□□□ -0.58
LRRC40-201ENST00000370952 MLH3Q9UHC1 1453 aa11.45□□□□□ -0.58
LRRC40-201ENST00000370952 NR1I2O75469 434 aa11.45□□□□□ -0.58
LRRC40-201ENST00000370952 CDK11BP21127 795 aaKnown RBP11.45□□□□□ -0.58
LRRC40-201ENST00000370952 IRX5P78411 483 aaPredicted RBP11.45□□□□□ -0.58
LRRC40-201ENST00000370952 TDRD7Q8NHU6 1098 aaKnown RBP11.45□□□□□ -0.58
LRRC40-201ENST00000370952 SPATA32Q96LK8 384 aa11.45□□□□□ -0.58
LRRC40-201ENST00000370952 A0A087WWV3 80 aa11.44□□□□□ -0.58
LRRC40-201ENST00000370952 VPS53Q5VIR6 699 aa11.44□□□□□ -0.58
LRRC40-201ENST00000370952 BICD2Q8TD16 824 aa11.44□□□□□ -0.58
LRRC40-201ENST00000370952 TRERF1Q96PN7 1200 aa11.44□□□□□ -0.58
LRRC40-201ENST00000370952 RBM6P78332 1123 aaKnown RBP11.44□□□□□ -0.58
LRRC40-201ENST00000370952 FILIP1Q7Z7B0 1213 aa11.44□□□□□ -0.58
LRRC40-201ENST00000370952 SSH3Q8TE77 659 aa11.44□□□□□ -0.58
LRRC40-201ENST00000370952 SRGAP3O43295 1099 aa11.43□□□□□ -0.58
LRRC40-201ENST00000370952 PDE4CQ08493 712 aa11.43□□□□□ -0.58
LRRC40-201ENST00000370952 PTPN14Q15678 1187 aa11.43□□□□□ -0.58
LRRC40-201ENST00000370952 LRRC8AQ8IWT6 810 aa11.43□□□□□ -0.58
LRRC40-201ENST00000370952 ZSCAN31Q96LW9 406 aaPredicted RBP11.43□□□□□ -0.58
LRRC40-201ENST00000370952 SH2B1Q9NRF2 756 aaPredicted RBP11.43□□□□□ -0.58
LRRC40-201ENST00000370952 STK3Q13188 491 aa11.43□□□□□ -0.58
LRRC40-201ENST00000370952 ARHGAP30Q7Z6I6 1101 aaPredicted RBP11.43□□□□□ -0.58
LRRC40-201ENST00000370952 TXNDC2Q86VQ3 553 aa11.43□□□□□ -0.58
LRRC40-201ENST00000370952 SYTL4Q96C24 671 aaPredicted RBP11.43□□□□□ -0.58
LRRC40-201ENST00000370952 CLSTN2Q9H4D0 955 aa11.43□□□□□ -0.58
LRRC40-201ENST00000370952 ZSWIM6Q9HCJ5 1215 aa11.43□□□□□ -0.58
LRRC40-201ENST00000370952 USP16Q9Y5T5 823 aa11.43□□□□□ -0.58
LRRC40-201ENST00000370952 XRN1Q8IZH2 1706 aaKnown RBP11.43□□□□□ -0.58
LRRC40-201ENST00000370952 NUTM2FA1L443 756 aa11.42□□□□□ -0.58
LRRC40-201ENST00000370952 CCDC66A2RUB6 948 aa11.42□□□□□ -0.58
LRRC40-201ENST00000370952 RAB11FIP3O75154 756 aa11.42□□□□□ -0.58
LRRC40-201ENST00000370952 LARP1Q6PKG0 1096 aaKnown RBP11.42□□□□□ -0.58
LRRC40-201ENST00000370952 LEO1Q8WVC0 666 aaPredicted RBP11.42□□□□□ -0.58
LRRC40-201ENST00000370952 NAP1L2Q9ULW6 460 aaPredicted RBP11.42□□□□□ -0.58
LRRC40-201ENST00000370952 MAP3K19Q56UN5 1328 aa11.42□□□□□ -0.58
LRRC40-201ENST00000370952 TTC21AQ8NDW8 1320 aa11.42□□□□□ -0.58
LRRC40-201ENST00000370952 ELP1O95163 1332 aa11.42□□□□□ -0.58
LRRC40-201ENST00000370952 SKILP12757 684 aa11.42□□□□□ -0.58
LRRC40-201ENST00000370952 CCDC30Q5VVM6 783 aa11.42□□□□□ -0.58
LRRC40-201ENST00000370952 PGBD1Q96JS3 809 aa11.42□□□□□ -0.58
LRRC40-201ENST00000370952 PHAXQ9H814 394 aaKnown RBP11.42□□□□□ -0.58
LRRC40-201ENST00000370952 DDX19AQ9NUU7 478 aaKnown RBP11.42□□□□□ -0.58
LRRC40-201ENST00000370952 C11orf57Q6ZUT1 292 aaPredicted RBP11.42□□□□□ -0.58
LRRC40-201ENST00000370952 ERBB3P21860 1342 aa11.41□□□□□ -0.58
LRRC40-201ENST00000370952 NPHP3Q7Z494 1330 aa11.41□□□□□ -0.58
LRRC40-201ENST00000370952 GOLGA6L19H0YKK7 550 aa11.41□□□□□ -0.58
LRRC40-201ENST00000370952 CEBPZQ03701 1054 aaKnown RBP11.41□□□□□ -0.58
LRRC40-201ENST00000370952 OS9Q13438 667 aaPredicted RBP11.41□□□□□ -0.58
LRRC40-201ENST00000370952 KLHL34Q8N239 644 aa11.41□□□□□ -0.58
LRRC40-201ENST00000370952 FBXW7Q969H0 707 aa11.41□□□□□ -0.58
LRRC40-201ENST00000370952 KIF1BPQ96EK5 621 aa11.41□□□□□ -0.58
LRRC40-201ENST00000370952 TIGD1Q96MW7 591 aa11.41□□□□□ -0.58
LRRC40-201ENST00000370952 ZNF446Q9NWS9 450 aa11.41□□□□□ -0.58
LRRC40-201ENST00000370952 CCDC61Q9Y6R9 512 aa11.41□□□□□ -0.58
LRRC40-201ENST00000370952 CCDC69A6NI79 296 aa11.41□□□□□ -0.58
LRRC40-201ENST00000370952 NYAP1Q6ZVC0 841 aa11.41□□□□□ -0.58
LRRC40-201ENST00000370952 GTF3C6Q969F1 213 aa11.41□□□□□ -0.58
LRRC40-201ENST00000370952 DDX11Q96FC9 970 aa11.41□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 9.8 ms