RNA–Protein interactions for RNA: ENST00000370886.9

EXOSC1-203, Transcript of exosome component 1, humanhuman

TSL 5 BASIC

Gene EXOSC1, Length 741 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC1-203ENST00000370886 SCN11AQ9UI33 1791 aa13.87□□□□□ -0.19
EXOSC1-203ENST00000370886 DLEC1Q9Y238 1755 aa13.87□□□□□ -0.19
EXOSC1-203ENST00000370886 EIF2S2P20042 333 aaKnown RBP13.87□□□□□ -0.19
EXOSC1-203ENST00000370886 CANXP27824 592 aaKnown RBP13.87□□□□□ -0.19
EXOSC1-203ENST00000370886 RASSF7Q02833 373 aa13.87□□□□□ -0.19
EXOSC1-203ENST00000370886 VSIG10Q8N0Z9 540 aa13.87□□□□□ -0.19
EXOSC1-203ENST00000370886 NGEFQ8N5V2 710 aa13.87□□□□□ -0.19
EXOSC1-203ENST00000370886 NECTIN2Q92692 538 aa13.87□□□□□ -0.19
EXOSC1-203ENST00000370886 YTHDC1Q96MU7 727 aaKnown RBP13.87□□□□□ -0.19
EXOSC1-203ENST00000370886 BABAM1Q9NWV8 329 aa13.87□□□□□ -0.19
EXOSC1-203ENST00000370886 SRP68Q9UHB9 627 aaKnown RBP13.87□□□□□ -0.19
EXOSC1-203ENST00000370886 POLRMTO00411 1230 aaKnown RBP13.86□□□□□ -0.19
EXOSC1-203ENST00000370886 PIP4K2AP48426 406 aaPredicted RBP13.86□□□□□ -0.19
EXOSC1-203ENST00000370886 TEX13AQ9BXU3 409 aaPredicted RBP13.86□□□□□ -0.19
EXOSC1-203ENST00000370886 USP16Q9Y5T5 823 aa13.86□□□□□ -0.19
EXOSC1-203ENST00000370886 TJP1Q07157 1748 aa13.85□□□□□ -0.19
EXOSC1-203ENST00000370886 ZPR1O75312 459 aa13.85□□□□□ -0.19
EXOSC1-203ENST00000370886 A1BGP04217 495 aa13.85□□□□□ -0.19
EXOSC1-203ENST00000370886 ZNF853P0CG23 659 aa13.85□□□□□ -0.19
EXOSC1-203ENST00000370886 CYP19A1P11511 503 aaPredicted RBP13.85□□□□□ -0.19
EXOSC1-203ENST00000370886 GOLGA2Q08379 1002 aa13.85□□□□□ -0.19
EXOSC1-203ENST00000370886 NCBP3Q53F19 620 aaKnown RBP13.85□□□□□ -0.19
EXOSC1-203ENST00000370886 MYH16Q9H6N6 1097 aa13.85□□□□□ -0.19
EXOSC1-203ENST00000370886 SPINK5Q9NQ38 1064 aaPredicted RBP13.85□□□□□ -0.19
EXOSC1-203ENST00000370886 AFDNP55196 1824 aaKnown RBP13.85□□□□□ -0.19
EXOSC1-203ENST00000370886 ADAMTS7Q9UKP4 1686 aa13.85□□□□□ -0.19
EXOSC1-203ENST00000370886 DUSP27Q5VZP5 1158 aa13.84□□□□□ -0.19
EXOSC1-203ENST00000370886 DPY19L2Q6NUT2 758 aa13.84□□□□□ -0.19
EXOSC1-203ENST00000370886 INTS5Q6P9B9 1019 aaKnown RBP13.84□□□□□ -0.19
EXOSC1-203ENST00000370886 NPM2Q86SE8 214 aaKnown RBP13.84□□□□□ -0.19
EXOSC1-203ENST00000370886 IL16Q14005 1332 aa13.84□□□□□ -0.19
EXOSC1-203ENST00000370886 TM4SF1P30408 202 aa13.83□□□□□ -0.2
EXOSC1-203ENST00000370886 TTLL6Q8N841 843 aa13.83□□□□□ -0.2
EXOSC1-203ENST00000370886 C8orf58Q8NAV2 365 aa13.83□□□□□ -0.2
EXOSC1-203ENST00000370886 CDCA7LQ96GN5 454 aa13.83□□□□□ -0.2
EXOSC1-203ENST00000370886 CREBZFQ9NS37 354 aa13.83□□□□□ -0.2
EXOSC1-203ENST00000370886 ZBTB1Q9Y2K1 713 aa13.83□□□□□ -0.2
EXOSC1-203ENST00000370886 NRXN2Q9P2S2 1712 aa13.83□□□□□ -0.2
EXOSC1-203ENST00000370886 FANCIQ9NVI1 1328 aa13.83□□□□□ -0.2
EXOSC1-203ENST00000370886 DICER1Q9UPY3 1922 aaKnown RBP13.82□□□□□ -0.2
EXOSC1-203ENST00000370886 MYL6BP14649 208 aa13.82□□□□□ -0.2
EXOSC1-203ENST00000370886 DLG5Q8TDM6 1919 aa13.82□□□□□ -0.2
EXOSC1-203ENST00000370886 TCERG1O14776 1098 aaKnown RBP13.81□□□□□ -0.2
EXOSC1-203ENST00000370886 EXOSC9Q06265 439 aaKnown RBP13.81□□□□□ -0.2
EXOSC1-203ENST00000370886 HDGFL1Q5TGJ6 251 aa13.81□□□□□ -0.2
EXOSC1-203ENST00000370886 USPL1Q5W0Q7 1092 aa13.81□□□□□ -0.2
EXOSC1-203ENST00000370886 ZNF521Q96K83 1311 aa13.81□□□□□ -0.2
EXOSC1-203ENST00000370886 E9PSI1 815 aa13.8□□□□□ -0.2
EXOSC1-203ENST00000370886 TSPYL6Q8N831 410 aa13.8□□□□□ -0.2
EXOSC1-203ENST00000370886 PRDM10Q9NQV6 1147 aa13.8□□□□□ -0.2
EXOSC1-203ENST00000370886 SOS1Q07889 1333 aaPredicted RBP13.8□□□□□ -0.2
EXOSC1-203ENST00000370886 H0YIN7 160 aa13.79□□□□□ -0.2
EXOSC1-203ENST00000370886 NFKBIEO00221 500 aa13.79□□□□□ -0.2
EXOSC1-203ENST00000370886 SLC34A2O95436 690 aa13.79□□□□□ -0.2
EXOSC1-203ENST00000370886 ANXA1P04083 346 aa13.79□□□□□ -0.2
EXOSC1-203ENST00000370886 SLFN5Q08AF3 891 aa13.79□□□□□ -0.2
EXOSC1-203ENST00000370886 NFIXQ14938 502 aa13.79□□□□□ -0.2
EXOSC1-203ENST00000370886 TWISTNBQ3B726 338 aaPredicted RBP13.79□□□□□ -0.2
EXOSC1-203ENST00000370886 AIDAQ96BJ3 306 aa13.79□□□□□ -0.2
EXOSC1-203ENST00000370886 MKRN1Q9UHC7 482 aaKnown RBP13.79□□□□□ -0.2
EXOSC1-203ENST00000370886 TBC1D2BQ9UPU7 963 aa13.79□□□□□ -0.2
EXOSC1-203ENST00000370886 COL15A1P39059 1388 aa13.79□□□□□ -0.2
EXOSC1-203ENST00000370886 NBPF26B4DH59 902 aa13.78□□□□□ -0.2
EXOSC1-203ENST00000370886 SERPINB2P05120 415 aa13.78□□□□□ -0.2
EXOSC1-203ENST00000370886 CHADLQ6NUI6 762 aa13.78□□□□□ -0.2
EXOSC1-203ENST00000370886 NBPF10Q6P3W6 841 aaKnown RBP13.78□□□□□ -0.2
EXOSC1-203ENST00000370886 C2CD5Q86YS7 1000 aa13.78□□□□□ -0.2
EXOSC1-203ENST00000370886 NBPF15Q8N660 670 aa13.78□□□□□ -0.2
EXOSC1-203ENST00000370886 NARFQ9UHQ1 456 aa13.78□□□□□ -0.2
EXOSC1-203ENST00000370886 POTECB2RU33 542 aa13.77□□□□□ -0.21
EXOSC1-203ENST00000370886 FOXN1O15353 648 aa13.77□□□□□ -0.21
EXOSC1-203ENST00000370886 IL6STP40189 918 aaPredicted RBP13.77□□□□□ -0.21
EXOSC1-203ENST00000370886 CNTNAP1P78357 1384 aa13.77□□□□□ -0.21
EXOSC1-203ENST00000370886 AIMP1Q12904 312 aaKnown RBP13.77□□□□□ -0.21
EXOSC1-203ENST00000370886 FER1L6Q2WGJ9 1857 aa13.77□□□□□ -0.21
EXOSC1-203ENST00000370886 ERFEQ4G0M1 354 aa13.77□□□□□ -0.21
EXOSC1-203ENST00000370886 CHPF2Q9P2E5 772 aa13.77□□□□□ -0.21
EXOSC1-203ENST00000370886 PDZRN3Q9UPQ7 1066 aa13.77□□□□□ -0.21
EXOSC1-203ENST00000370886 SIPA1L3O60292 1781 aaPredicted RBP13.76□□□□□ -0.21
EXOSC1-203ENST00000370886 A0A087WZG4 1122 aa13.76□□□□□ -0.21
EXOSC1-203ENST00000370886 CTCFP49711 727 aaPredicted RBP13.76□□□□□ -0.21
EXOSC1-203ENST00000370886 EIF5P55010 431 aaKnown RBP13.76□□□□□ -0.21
EXOSC1-203ENST00000370886 PROSER3Q2NL68 480 aa13.76□□□□□ -0.21
EXOSC1-203ENST00000370886 HOXB7P09629 217 aa13.75□□□□□ -0.21
EXOSC1-203ENST00000370886 CCDC30Q5VVM6 783 aa13.75□□□□□ -0.21
EXOSC1-203ENST00000370886 DZIP3Q86Y13 1208 aaKnown RBP13.75□□□□□ -0.21
EXOSC1-203ENST00000370886 STK31Q9BXU1 1019 aa13.75□□□□□ -0.21
EXOSC1-203ENST00000370886 DBF4Q9UBU7 674 aaPredicted RBP13.75□□□□□ -0.21
EXOSC1-203ENST00000370886 CARMIL3Q8ND23 1372 aa13.74□□□□□ -0.21
EXOSC1-203ENST00000370886 ZBED9Q6R2W3 1325 aa13.74□□□□□ -0.21
EXOSC1-203ENST00000370886 LTBP3Q9NS15 1303 aa13.74□□□□□ -0.21
EXOSC1-203ENST00000370886 IQCA1LA6NCM1 817 aa13.74□□□□□ -0.21
EXOSC1-203ENST00000370886 KIF6Q6ZMV9 814 aa13.74□□□□□ -0.21
EXOSC1-203ENST00000370886 BICDL1Q6ZP65 573 aa13.74□□□□□ -0.21
EXOSC1-203ENST00000370886 SCN4AP35499 1836 aa13.74□□□□□ -0.21
EXOSC1-203ENST00000370886 VIRMAQ69YN4 1812 aaKnown RBP13.74□□□□□ -0.21
EXOSC1-203ENST00000370886 VAMP4O75379 141 aa13.73□□□□□ -0.21
EXOSC1-203ENST00000370886 PDE6BP35913 854 aa13.73□□□□□ -0.21
EXOSC1-203ENST00000370886 PDIA6Q15084 440 aa13.73□□□□□ -0.21
EXOSC1-203ENST00000370886 TTLL7Q6ZT98 887 aa13.73□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms