RNA–Protein interactions for RNA: ENST00000369747.7

UBE3D-203, Transcript of ubiquitin protein ligase E3D, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBE3D, Length 1,917 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3D-203ENST00000369747 ZNF330Q9Y3S2 320 aaPredicted RBP21.73■■□□□ 1.07
UBE3D-203ENST00000369747 PROM2Q8N271 834 aa21.72■■□□□ 1.07
UBE3D-203ENST00000369747 PI4KAP2A4QPH2 592 aa21.72■■□□□ 1.07
UBE3D-203ENST00000369747 ERICH6Q7L0X2 663 aa21.72■■□□□ 1.07
UBE3D-203ENST00000369747 PI4KAP1Q8N8J0 262 aa21.72■■□□□ 1.07
UBE3D-203ENST00000369747 CCDC87Q9NVE4 849 aa21.72■■□□□ 1.07
UBE3D-203ENST00000369747 TAF1LQ8IZX4 1826 aa21.71■■□□□ 1.07
UBE3D-203ENST00000369747 PLSCR1O15162 318 aa21.7■■□□□ 1.07
UBE3D-203ENST00000369747 TTLL7Q6ZT98 887 aa21.7■■□□□ 1.07
UBE3D-203ENST00000369747 ADCY9O60503 1353 aa21.7■■□□□ 1.07
UBE3D-203ENST00000369747 TXNRD1Q16881 649 aa21.7■■□□□ 1.06
UBE3D-203ENST00000369747 SLC4A10Q6U841 1118 aa21.7■■□□□ 1.06
UBE3D-203ENST00000369747 SMC5Q8IY18 1101 aa21.7■■□□□ 1.06
UBE3D-203ENST00000369747 CHMP4BQ9H444 224 aaKnown RBP21.69■■□□□ 1.06
UBE3D-203ENST00000369747 RREB1Q92766 1687 aa21.68■■□□□ 1.06
UBE3D-203ENST00000369747 SLC27A3Q5K4L6 730 aa21.68■■□□□ 1.06
UBE3D-203ENST00000369747 ANKRD13DQ6ZTN6 518 aa21.68■■□□□ 1.06
UBE3D-203ENST00000369747 MAP3K2Q9Y2U5 619 aa21.68■■□□□ 1.06
UBE3D-203ENST00000369747 IL6STP40189 918 aaPredicted RBP21.67■■□□□ 1.06
UBE3D-203ENST00000369747 KSR2Q6VAB6 950 aa21.67■■□□□ 1.06
UBE3D-203ENST00000369747 DDX58O95786 925 aaKnown RBP21.67■■□□□ 1.06
UBE3D-203ENST00000369747 EIF5P55010 431 aaKnown RBP21.67■■□□□ 1.06
UBE3D-203ENST00000369747 SMIM5Q71RC9 77 aa21.67■■□□□ 1.06
UBE3D-203ENST00000369747 ZBTB47Q9UFB7 747 aaPredicted RBP21.67■■□□□ 1.06
UBE3D-203ENST00000369747 CNTNAP4Q9C0A0 1308 aa21.66■■□□□ 1.06
UBE3D-203ENST00000369747 DNAAF4Q8WXU2 420 aa21.66■■□□□ 1.06
UBE3D-203ENST00000369747 ARXQ96QS3 562 aa21.66■■□□□ 1.06
UBE3D-203ENST00000369747 C4BP0C0L5 1744 aa21.65■■□□□ 1.06
UBE3D-203ENST00000369747 INTS3Q68E01 1043 aaKnown RBP21.65■■□□□ 1.06
UBE3D-203ENST00000369747 RIC3Q7Z5B4 369 aa21.65■■□□□ 1.06
UBE3D-203ENST00000369747 AMIGO3Q86WK7 504 aa21.65■■□□□ 1.06
UBE3D-203ENST00000369747 EN1Q05925 392 aaPredicted RBP21.65■■□□□ 1.06
UBE3D-203ENST00000369747 RC3H1Q5TC82 1133 aaKnown RBP21.65■■□□□ 1.06
UBE3D-203ENST00000369747 ZBTB3Q9H5J0 574 aa21.65■■□□□ 1.06
UBE3D-203ENST00000369747 GNPATO15228 680 aa21.64■■□□□ 1.05
UBE3D-203ENST00000369747 C1orf115Q9H7X2 142 aa21.64■■□□□ 1.05
UBE3D-203ENST00000369747 PLBD2Q8NHP8 589 aa21.63■■□□□ 1.05
UBE3D-203ENST00000369747 TBC1D2BQ9UPU7 963 aa21.63■■□□□ 1.05
UBE3D-203ENST00000369747 ARFGEF2Q9Y6D5 1785 aa21.62■■□□□ 1.05
UBE3D-203ENST00000369747 EZH2Q15910 746 aaKnown RBP21.62■■□□□ 1.05
UBE3D-203ENST00000369747 BEND3Q5T5X7 828 aa21.62■■□□□ 1.05
UBE3D-203ENST00000369747 DEFB132Q7Z7B7 95 aa21.61■■□□□ 1.05
UBE3D-203ENST00000369747 DZIP3Q86Y13 1208 aaKnown RBP21.61■■□□□ 1.05
UBE3D-203ENST00000369747 CAMKK2Q96RR4 588 aa21.61■■□□□ 1.05
UBE3D-203ENST00000369747 NUP188Q5SRE5 1749 aa21.61■■□□□ 1.05
UBE3D-203ENST00000369747 PXDNLA1KZ92 1463 aa21.61■■□□□ 1.05
UBE3D-203ENST00000369747 COL15A1P39059 1388 aa21.61■■□□□ 1.05
UBE3D-203ENST00000369747 CCT4P50991 539 aaKnown RBP21.61■■□□□ 1.05
UBE3D-203ENST00000369747 SF3B2Q13435 895 aaKnown RBP21.61■■□□□ 1.05
UBE3D-203ENST00000369747 RGPD3A6NKT7 1758 aaPredicted RBP21.6■■□□□ 1.05
UBE3D-203ENST00000369747 RGPD4Q7Z3J3 1758 aa21.6■■□□□ 1.05
UBE3D-203ENST00000369747 RPS6KA4O75676 772 aa21.6■■□□□ 1.05
UBE3D-203ENST00000369747 NUCB1Q02818 461 aa21.6■■□□□ 1.05
UBE3D-203ENST00000369747 CWF19L2Q2TBE0 894 aaKnown RBP21.6■■□□□ 1.05
UBE3D-203ENST00000369747 KIF6Q6ZMV9 814 aa21.6■■□□□ 1.05
UBE3D-203ENST00000369747 SIRT2Q8IXJ6 389 aa21.6■■□□□ 1.05
UBE3D-203ENST00000369747 AK7Q96M32 723 aa21.6■■□□□ 1.05
UBE3D-203ENST00000369747 METTL22Q9BUU2 404 aaPredicted RBP21.6■■□□□ 1.05
UBE3D-203ENST00000369747 MAP3K15Q6ZN16 1313 aa21.59■■□□□ 1.05
UBE3D-203ENST00000369747 MYD88Q99836 296 aa21.59■■□□□ 1.05
UBE3D-203ENST00000369747 SRCIN1Q9C0H9 1055 aa21.59■■□□□ 1.05
UBE3D-203ENST00000369747 IGKV5-2P06315 115 aa21.59■■□□□ 1.05
UBE3D-203ENST00000369747 HLFQ16534 295 aa21.59■■□□□ 1.05
UBE3D-203ENST00000369747 RTCBQ9Y3I0 505 aaKnown RBP21.59■■□□□ 1.05
UBE3D-203ENST00000369747 N4BP2Q86UW6 1770 aaPredicted RBP21.59■■□□□ 1.05
UBE3D-203ENST00000369747 ATP10DQ9P241 1426 aa21.58■■□□□ 1.05
UBE3D-203ENST00000369747 ATP5J2-PTCD1G3V325 749 aa21.58■■□□□ 1.04
UBE3D-203ENST00000369747 SEC24BO95487 1268 aa21.58■■□□□ 1.04
UBE3D-203ENST00000369747 DDRGK1Q96HY6 314 aa21.58■■□□□ 1.04
UBE3D-203ENST00000369747 PHF14O94880 888 aa21.57■■□□□ 1.04
UBE3D-203ENST00000369747 BAG6P46379 1132 aa21.57■■□□□ 1.04
UBE3D-203ENST00000369747 ZNF827Q17R98 1081 aa21.57■■□□□ 1.04
UBE3D-203ENST00000369747 LINS1Q8NG48 757 aa21.57■■□□□ 1.04
UBE3D-203ENST00000369747 MEIS3Q99687 375 aa21.57■■□□□ 1.04
UBE3D-203ENST00000369747 UBR3Q6ZT12 1888 aa21.56■■□□□ 1.04
UBE3D-203ENST00000369747 NEXNQ0ZGT2 675 aa21.56■■□□□ 1.04
UBE3D-203ENST00000369747 GCC1Q96CN9 775 aa21.56■■□□□ 1.04
UBE3D-203ENST00000369747 CAMTA2O94983 1202 aa21.55■■□□□ 1.04
UBE3D-203ENST00000369747 ARHGEF1Q92888 912 aaKnown RBP21.55■■□□□ 1.04
UBE3D-203ENST00000369747 NEURL1BA8MQ27 555 aa21.55■■□□□ 1.04
UBE3D-203ENST00000369747 GIGYF2Q6Y7W6 1299 aaKnown RBP21.55■■□□□ 1.04
UBE3D-203ENST00000369747 CHD1LQ86WJ1 897 aa21.55■■□□□ 1.04
UBE3D-203ENST00000369747 USP44Q9H0E7 712 aa21.55■■□□□ 1.04
UBE3D-203ENST00000369747 NUP98P52948 1817 aa21.54■■□□□ 1.04
UBE3D-203ENST00000369747 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP21.54■■□□□ 1.04
UBE3D-203ENST00000369747 ERVV-1B6SEH8 477 aa21.54■■□□□ 1.04
UBE3D-203ENST00000369747 TCIRG1Q13488 830 aa21.53■■□□□ 1.04
UBE3D-203ENST00000369747 TRAPPC3LQ5T215 181 aa21.53■■□□□ 1.04
UBE3D-203ENST00000369747 CCDC125Q86Z20 511 aa21.53■■□□□ 1.04
UBE3D-203ENST00000369747 AKT1S1Q96B36 256 aa21.53■■□□□ 1.04
UBE3D-203ENST00000369747 LNPKQ9C0E8 428 aa21.53■■□□□ 1.04
UBE3D-203ENST00000369747 SRP68Q9UHB9 627 aaKnown RBP21.53■■□□□ 1.04
UBE3D-203ENST00000369747 A0A087WZG4 1122 aa21.53■■□□□ 1.04
UBE3D-203ENST00000369747 ALDH1L1O75891 902 aa21.53■■□□□ 1.04
UBE3D-203ENST00000369747 C4AP0C0L4 1744 aa21.52■■□□□ 1.04
UBE3D-203ENST00000369747 NBPF7P0C2Y1 421 aaPredicted RBP21.52■■□□□ 1.04
UBE3D-203ENST00000369747 TFCP2L1Q9NZI6 479 aa21.52■■□□□ 1.04
UBE3D-203ENST00000369747 AFDNP55196 1824 aaKnown RBP21.52■■□□□ 1.04
UBE3D-203ENST00000369747 GPTP24298 496 aa21.51■■□□□ 1.03
UBE3D-203ENST00000369747 GCKRQ14397 625 aa21.51■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms