RNA–Protein interactions for RNA: ENST00000369604.5

PHTF1-204, Transcript of putative homeodomain transcription factor 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PHTF1, Length 3,273 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHTF1-204ENST00000369604 SPATA32Q96LK8 384 aa17.05■□□□□ 0.32
PHTF1-204ENST00000369604 LSG1Q9H089 658 aaKnown RBP17.05■□□□□ 0.32
PHTF1-204ENST00000369604 FLIIQ13045 1269 aa17.04■□□□□ 0.32
PHTF1-204ENST00000369604 TIGD1Q96MW7 591 aa17.04■□□□□ 0.32
PHTF1-204ENST00000369604 NAP1L2Q9ULW6 460 aaPredicted RBP17.04■□□□□ 0.32
PHTF1-204ENST00000369604 PTPRMP28827 1452 aa17.04■□□□□ 0.32
PHTF1-204ENST00000369604 EIF4A2Q14240 407 aaKnown RBP17.04■□□□□ 0.32
PHTF1-204ENST00000369604 KMT5BQ4FZB7 885 aa17.04■□□□□ 0.32
PHTF1-204ENST00000369604 ZSCAN31Q96LW9 406 aaPredicted RBP17.04■□□□□ 0.32
PHTF1-204ENST00000369604 OS9Q13438 667 aaPredicted RBP17.04■□□□□ 0.32
PHTF1-204ENST00000369604 TRERF1Q96PN7 1200 aa17.04■□□□□ 0.32
PHTF1-204ENST00000369604 FILIP1Q7Z7B0 1213 aa17.03■□□□□ 0.32
PHTF1-204ENST00000369604 FOXO3O43524 673 aa17.03■□□□□ 0.32
PHTF1-204ENST00000369604 ELF2Q15723 593 aa17.03■□□□□ 0.32
PHTF1-204ENST00000369604 CDC37L1Q7L3B6 337 aa17.03■□□□□ 0.32
PHTF1-204ENST00000369604 IL17RAQ96F46 866 aa17.03■□□□□ 0.32
PHTF1-204ENST00000369604 SH2B1Q9NRF2 756 aaPredicted RBP17.03■□□□□ 0.32
PHTF1-204ENST00000369604 NCKAP5LQ9HCH0 1330 aa17.03■□□□□ 0.32
PHTF1-204ENST00000369604 POGZQ7Z3K3 1410 aa17.03■□□□□ 0.32
PHTF1-204ENST00000369604 NEXMIFQ5QGS0 1516 aa17.03■□□□□ 0.32
PHTF1-204ENST00000369604 EPB41L2O43491 1005 aaKnown RBP17.02■□□□□ 0.32
PHTF1-204ENST00000369604 ADCK5Q3MIX3 580 aa17.02■□□□□ 0.32
PHTF1-204ENST00000369604 CCDC144BQ3MJ40 725 aa17.02■□□□□ 0.32
PHTF1-204ENST00000369604 CCDC144CPQ8IYA2 1237 aa17.02■□□□□ 0.32
PHTF1-204ENST00000369604 ARID5BQ14865 1188 aa17.02■□□□□ 0.32
PHTF1-204ENST00000369604 SLC52A1Q9NWF4 448 aa17.02■□□□□ 0.32
PHTF1-204ENST00000369604 ME3Q16798 604 aa17.02■□□□□ 0.31
PHTF1-204ENST00000369604 PLA2G4DQ86XP0 818 aa17.02■□□□□ 0.31
PHTF1-204ENST00000369604 USP27XA6NNY8 438 aa17.01■□□□□ 0.31
PHTF1-204ENST00000369604 IRX5P78411 483 aaPredicted RBP17.01■□□□□ 0.31
PHTF1-204ENST00000369604 ARHGAP30Q7Z6I6 1101 aaPredicted RBP17.01■□□□□ 0.31
PHTF1-204ENST00000369604 SKILP12757 684 aa17.01■□□□□ 0.31
PHTF1-204ENST00000369604 ZKSCAN1P17029 563 aaPredicted RBP17.01■□□□□ 0.31
PHTF1-204ENST00000369604 ST7Q9NRC1 585 aa17.01■□□□□ 0.31
PHTF1-204ENST00000369604 DDX19AQ9NUU7 478 aaKnown RBP17.01■□□□□ 0.31
PHTF1-204ENST00000369604 CDK12Q9NYV4 1490 aaPredicted RBP17.01■□□□□ 0.31
PHTF1-204ENST00000369604 VPS53Q5VIR6 699 aa17.01■□□□□ 0.31
PHTF1-204ENST00000369604 PPP1R42Q7Z4L9 355 aa17.01■□□□□ 0.31
PHTF1-204ENST00000369604 KLHL34Q8N239 644 aa17.01■□□□□ 0.31
PHTF1-204ENST00000369604 RHPN1Q8TCX5 695 aa17.01■□□□□ 0.31
PHTF1-204ENST00000369604 FBXO38Q6PIJ6 1188 aa17■□□□□ 0.31
PHTF1-204ENST00000369604 RUFY2Q8WXA3 655 aa17■□□□□ 0.31
PHTF1-204ENST00000369604 SCAND2PQ9GZW5 306 aaPredicted RBP17■□□□□ 0.31
PHTF1-204ENST00000369604 DLG5Q8TDM6 1919 aa17■□□□□ 0.31
PHTF1-204ENST00000369604 AOX1Q06278 1338 aa17■□□□□ 0.31
PHTF1-204ENST00000369604 SOS1Q07889 1333 aaPredicted RBP17■□□□□ 0.31
PHTF1-204ENST00000369604 BECN2A8MW95 431 aa17■□□□□ 0.31
PHTF1-204ENST00000369604 PTH1RQ03431 593 aa17■□□□□ 0.31
PHTF1-204ENST00000369604 TCEANC2Q96MN5 208 aa17■□□□□ 0.31
PHTF1-204ENST00000369604 CCDC171Q6TFL3 1326 aa17■□□□□ 0.31
PHTF1-204ENST00000369604 KIF20BQ96Q89 1820 aa17■□□□□ 0.31
PHTF1-204ENST00000369604 KIDINS220Q9ULH0 1771 aa16.99■□□□□ 0.31
PHTF1-204ENST00000369604 SRGAP3O43295 1099 aa16.99■□□□□ 0.31
PHTF1-204ENST00000369604 PDCP20941 246 aa16.99■□□□□ 0.31
PHTF1-204ENST00000369604 TDRD7Q8NHU6 1098 aaKnown RBP16.99■□□□□ 0.31
PHTF1-204ENST00000369604 CALCOCO1Q9P1Z2 691 aa16.99■□□□□ 0.31
PHTF1-204ENST00000369604 NR1I2O75469 434 aa16.99■□□□□ 0.31
PHTF1-204ENST00000369604 STK3Q13188 491 aa16.99■□□□□ 0.31
PHTF1-204ENST00000369604 CCDC30Q5VVM6 783 aa16.99■□□□□ 0.31
PHTF1-204ENST00000369604 LRRC8AQ8IWT6 810 aa16.99■□□□□ 0.31
PHTF1-204ENST00000369604 RAB11FIP3O75154 756 aa16.99■□□□□ 0.31
PHTF1-204ENST00000369604 FAM69CQ0P6D2 419 aa16.99■□□□□ 0.31
PHTF1-204ENST00000369604 PLCD3Q8N3E9 789 aa16.99■□□□□ 0.31
PHTF1-204ENST00000369604 PI4K2BQ8TCG2 481 aa16.99■□□□□ 0.31
PHTF1-204ENST00000369604 CLSTN2Q9H4D0 955 aa16.99■□□□□ 0.31
PHTF1-204ENST00000369604 HSP90AB2PQ58FF8 381 aa16.98■□□□□ 0.31
PHTF1-204ENST00000369604 FBXW7Q969H0 707 aa16.98■□□□□ 0.31
PHTF1-204ENST00000369604 CEBPZQ03701 1054 aaKnown RBP16.98■□□□□ 0.31
PHTF1-204ENST00000369604 PPP6R1Q9UPN7 881 aa16.98■□□□□ 0.31
PHTF1-204ENST00000369604 USP16Q9Y5T5 823 aa16.98■□□□□ 0.31
PHTF1-204ENST00000369604 NPHP3Q7Z494 1330 aa16.97■□□□□ 0.31
PHTF1-204ENST00000369604 KIF1BPQ96EK5 621 aa16.97■□□□□ 0.31
PHTF1-204ENST00000369604 ERO1AQ96HE7 468 aa16.97■□□□□ 0.31
PHTF1-204ENST00000369604 NOL10Q9BSC4 688 aaKnown RBP16.97■□□□□ 0.31
PHTF1-204ENST00000369604 TPCN1Q9ULQ1 816 aa16.97■□□□□ 0.31
PHTF1-204ENST00000369604 USP44Q9H0E7 712 aa16.97■□□□□ 0.31
PHTF1-204ENST00000369604 ABCA9Q8IUA7 1624 aa16.97■□□□□ 0.31
PHTF1-204ENST00000369604 EDC4Q6P2E9 1401 aaKnown RBP16.97■□□□□ 0.31
PHTF1-204ENST00000369604 AATKQ6ZMQ8 1374 aa16.97■□□□□ 0.31
PHTF1-204ENST00000369604 SLU7O95391 586 aaKnown RBP16.97■□□□□ 0.31
PHTF1-204ENST00000369604 LEO1Q8WVC0 666 aaPredicted RBP16.97■□□□□ 0.31
PHTF1-204ENST00000369604 GTF3C6Q969F1 213 aa16.97■□□□□ 0.31
PHTF1-204ENST00000369604 NUDT16Q96DE0 195 aaKnown RBP16.97■□□□□ 0.31
PHTF1-204ENST00000369604 CCDC69A6NI79 296 aa16.96■□□□□ 0.31
PHTF1-204ENST00000369604 TRHP20396 242 aaPredicted RBP16.96■□□□□ 0.31
PHTF1-204ENST00000369604 ZSWIM6Q9HCJ5 1215 aa16.96■□□□□ 0.31
PHTF1-204ENST00000369604 ELP1O95163 1332 aa16.96■□□□□ 0.3
PHTF1-204ENST00000369604 WASLO00401 505 aaPredicted RBP16.95■□□□□ 0.3
PHTF1-204ENST00000369604 HTATSF1O43719 755 aaKnown RBP16.95■□□□□ 0.3
PHTF1-204ENST00000369604 ST3GAL1Q11201 340 aa16.95■□□□□ 0.3
PHTF1-204ENST00000369604 RBM6P78332 1123 aaKnown RBP16.95■□□□□ 0.3
PHTF1-204ENST00000369604 MTHFSDQ2M296 383 aaKnown RBP16.95■□□□□ 0.3
PHTF1-204ENST00000369604 LARP1Q6PKG0 1096 aaKnown RBP16.95■□□□□ 0.3
PHTF1-204ENST00000369604 SYTL4Q96C24 671 aaPredicted RBP16.95■□□□□ 0.3
PHTF1-204ENST00000369604 NEMFO60524 1076 aa16.95■□□□□ 0.3
PHTF1-204ENST00000369604 SSH3Q8TE77 659 aa16.95■□□□□ 0.3
PHTF1-204ENST00000369604 ATP7BP35670 1465 aa16.94■□□□□ 0.3
PHTF1-204ENST00000369604 BMS1Q14692 1282 aaKnown RBP16.94■□□□□ 0.3
PHTF1-204ENST00000369604 GLRX3O76003 335 aaKnown RBP16.94■□□□□ 0.3
PHTF1-204ENST00000369604 GORABQ5T7V8 394 aa16.94■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms