RNA–Protein interactions for RNA: ENST00000369603.9

SMNDC1-202, Transcript of survival motor neuron domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMNDC1, Length 4,341 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMNDC1-202ENST00000369603 JAKMIP1Q96N16 626 aaKnown RBP6.34□□□□□ -1.39
SMNDC1-202ENST00000369603 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP6.34□□□□□ -1.392e-7■■□□□ 14
SMNDC1-202ENST00000369603 LETM1O95202 739 aaPredicted RBP6.34□□□□□ -1.4
SMNDC1-202ENST00000369603 ADAMTS2O95450 1211 aa6.34□□□□□ -1.4
SMNDC1-202ENST00000369603 IGHMBP2P38935 993 aaKnown RBP6.34□□□□□ -1.4
SMNDC1-202ENST00000369603 EIF4A1P60842 406 aaKnown RBP6.34□□□□□ -1.4
SMNDC1-202ENST00000369603 METTL24Q5JXM2 366 aa6.34□□□□□ -1.4
SMNDC1-202ENST00000369603 IL17REQ8NFR9 667 aa6.34□□□□□ -1.4
SMNDC1-202ENST00000369603 NACAP1Q9BZK3 213 aa6.34□□□□□ -1.4
SMNDC1-202ENST00000369603 BOLA2Q9H3K6 86 aa6.34□□□□□ -1.4
SMNDC1-202ENST00000369603 ZBTB3Q9H5J0 574 aa6.34□□□□□ -1.4
SMNDC1-202ENST00000369603 SLC52A2Q9HAB3 445 aa6.34□□□□□ -1.4
SMNDC1-202ENST00000369603 SLAIN2Q9P270 581 aa6.34□□□□□ -1.4
SMNDC1-202ENST00000369603 RICTORQ6R327 1708 aa6.33□□□□□ -1.4
SMNDC1-202ENST00000369603 CDC42BPGQ6DT37 1551 aa6.33□□□□□ -1.4
SMNDC1-202ENST00000369603 FKBP4Q02790 459 aaKnown RBP eCLIP6.33□□□□□ -1.4
SMNDC1-202ENST00000369603 CCDC8Q9H0W5 538 aaPredicted RBP6.33□□□□□ -1.4
SMNDC1-202ENST00000369603 SH2B1Q9NRF2 756 aaPredicted RBP6.33□□□□□ -1.4
SMNDC1-202ENST00000369603 ADGRL3Q9HAR2 1447 aa6.33□□□□□ -1.4
SMNDC1-202ENST00000369603 SAFBQ15424 915 aaKnown RBP eCLIP6.33□□□□□ -1.4
SMNDC1-202ENST00000369603 BICD2Q8TD16 824 aa6.33□□□□□ -1.4
SMNDC1-202ENST00000369603 CDCA7Q9BWT1 371 aaPredicted RBP6.33□□□□□ -1.4
SMNDC1-202ENST00000369603 PHAXQ9H814 394 aaKnown RBP6.33□□□□□ -1.4
SMNDC1-202ENST00000369603 LGR6Q9HBX8 967 aa6.33□□□□□ -1.4
SMNDC1-202ENST00000369603 ANKRD18BA2A2Z9 1011 aa6.33□□□□□ -1.4
SMNDC1-202ENST00000369603 ATP5J2-PTCD1G3V325 749 aa6.33□□□□□ -1.4
SMNDC1-202ENST00000369603 IFIT1P09914 478 aaKnown RBP6.33□□□□□ -1.4
SMNDC1-202ENST00000369603 CDK11BP21127 795 aaKnown RBP6.33□□□□□ -1.4
SMNDC1-202ENST00000369603 TRMT112Q9UI30 125 aaKnown RBP6.33□□□□□ -1.4
SMNDC1-202ENST00000369603 USP19O94966 1318 aa6.33□□□□□ -1.4
SMNDC1-202ENST00000369603 AOX1Q06278 1338 aa6.33□□□□□ -1.4
SMNDC1-202ENST00000369603 HMGB1P09429 215 aaKnown RBP6.32□□□□□ -1.4
SMNDC1-202ENST00000369603 U3KPZ7 1027 aaPredicted RBP6.32□□□□□ -1.4
SMNDC1-202ENST00000369603 CASTP20810 708 aaKnown RBP6.32□□□□□ -1.4
SMNDC1-202ENST00000369603 ESYT1Q9BSJ8 1104 aa6.32□□□□□ -1.4
SMNDC1-202ENST00000369603 ADAMTS13Q76LX8 1427 aa6.32□□□□□ -1.4
SMNDC1-202ENST00000369603 PRPF40AO75400 957 aaKnown RBP6.32□□□□□ -1.4
SMNDC1-202ENST00000369603 SLC3A2P08195 630 aaKnown RBP6.32□□□□□ -1.4
SMNDC1-202ENST00000369603 CCDC73Q6ZRK6 1079 aa6.32□□□□□ -1.4
SMNDC1-202ENST00000369603 SMARCC1Q92922 1105 aaPredicted RBP6.32□□□□□ -1.4
SMNDC1-202ENST00000369603 NGLY1Q96IV0 654 aa6.32□□□□□ -1.4
SMNDC1-202ENST00000369603 MYO3AQ8NEV4 1616 aa6.32□□□□□ -1.4
SMNDC1-202ENST00000369603 GOLGA6L19H0YKK7 550 aa6.31□□□□□ -1.4
SMNDC1-202ENST00000369603 PRPF40BQ6NWY9 871 aaKnown RBP6.31□□□□□ -1.4
SMNDC1-202ENST00000369603 HMG20BQ9P0W2 317 aa6.31□□□□□ -1.4
SMNDC1-202ENST00000369603 LIMCH1Q9UPQ0 1083 aa6.31□□□□□ -1.4
SMNDC1-202ENST00000369603 XBP1P17861 261 aa6.31□□□□□ -1.4
SMNDC1-202ENST00000369603 IL15P40933 162 aaPredicted RBP6.31□□□□□ -1.4
SMNDC1-202ENST00000369603 IMMTQ16891 758 aaKnown RBP6.31□□□□□ -1.4
SMNDC1-202ENST00000369603 C16orf71Q8IYS4 520 aaPredicted RBP6.31□□□□□ -1.4
SMNDC1-202ENST00000369603 UPF3BQ9BZI7 483 aaKnown RBP6.31□□□□□ -1.4
SMNDC1-202ENST00000369603 HOOK1Q9UJC3 728 aaKnown RBP6.31□□□□□ -1.4
SMNDC1-202ENST00000369603 BECN2A8MW95 431 aa6.31□□□□□ -1.4
SMNDC1-202ENST00000369603 RBM25P49756 843 aaKnown RBP6.31□□□□□ -1.4
SMNDC1-202ENST00000369603 LARP1BQ659C4 914 aaKnown RBP6.31□□□□□ -1.4
SMNDC1-202ENST00000369603 PLBD2Q8NHP8 589 aa6.31□□□□□ -1.4
SMNDC1-202ENST00000369603 ZNF396Q96N95 335 aaPredicted RBP6.31□□□□□ -1.4
SMNDC1-202ENST00000369603 METTL22Q9BUU2 404 aaPredicted RBP6.31□□□□□ -1.4
SMNDC1-202ENST00000369603 ERVV-2B6SEH9 535 aa6.31□□□□□ -1.4
SMNDC1-202ENST00000369603 GIGYF1O75420 1035 aaPredicted RBP6.31□□□□□ -1.4
SMNDC1-202ENST00000369603 KRT85P78386 507 aa6.31□□□□□ -1.4
SMNDC1-202ENST00000369603 DDB1Q16531 1140 aa6.31□□□□□ -1.4
SMNDC1-202ENST00000369603 CAVIN1Q6NZI2 390 aaKnown RBP6.31□□□□□ -1.4
SMNDC1-202ENST00000369603 ERBB4Q15303 1308 aa6.3□□□□□ -1.4
SMNDC1-202ENST00000369603 USP32Q8NFA0 1604 aa6.3□□□□□ -1.4
SMNDC1-202ENST00000369603 SLC5A1P13866 664 aa6.3□□□□□ -1.4
SMNDC1-202ENST00000369603 TTF1Q15361 905 aaPredicted RBP6.3□□□□□ -1.4
SMNDC1-202ENST00000369603 CWF19L2Q2TBE0 894 aaKnown RBP6.3□□□□□ -1.4
SMNDC1-202ENST00000369603 LMBR1LQ6UX01 489 aa6.3□□□□□ -1.4
SMNDC1-202ENST00000369603 LDHAL6AQ6ZMR3 332 aa6.3□□□□□ -1.4
SMNDC1-202ENST00000369603 FAM13BQ9NYF5 915 aa6.3□□□□□ -1.4
SMNDC1-202ENST00000369603 ZPR1O75312 459 aa6.3□□□□□ -1.4
SMNDC1-202ENST00000369603 CDKL5O76039 1030 aa6.3□□□□□ -1.4
SMNDC1-202ENST00000369603 PHKG2P15735 406 aa6.3□□□□□ -1.4
SMNDC1-202ENST00000369603 RASSF8Q8NHQ8 419 aa6.3□□□□□ -1.4
SMNDC1-202ENST00000369603 CCDC85AQ96PX6 553 aaPredicted RBP6.3□□□□□ -1.4
SMNDC1-202ENST00000369603 LRRC7Q96NW7 1537 aa6.3□□□□□ -1.4
SMNDC1-202ENST00000369603 ARHGEF28Q8N1W1 1705 aaKnown RBP6.3□□□□□ -1.4
SMNDC1-202ENST00000369603 ZFYP08048 801 aaPredicted RBP6.3□□□□□ -1.4
SMNDC1-202ENST00000369603 NASPP49321 788 aaPredicted RBP6.3□□□□□ -1.4
SMNDC1-202ENST00000369603 TSHZ3Q63HK5 1081 aa6.3□□□□□ -1.4
SMNDC1-202ENST00000369603 SASS6Q6UVJ0 657 aa6.3□□□□□ -1.4
SMNDC1-202ENST00000369603 ERBB3P21860 1342 aa6.29□□□□□ -1.4
SMNDC1-202ENST00000369603 RAD50Q92878 1312 aa6.29□□□□□ -1.4
SMNDC1-202ENST00000369603 LMTK3Q96Q04 1460 aa6.29□□□□□ -1.4
SMNDC1-202ENST00000369603 EPB41L2O43491 1005 aaKnown RBP6.29□□□□□ -1.4
SMNDC1-202ENST00000369603 IDH1O75874 414 aaKnown RBP6.29□□□□□ -1.4
SMNDC1-202ENST00000369603 AIDAQ96BJ3 306 aa6.29□□□□□ -1.4
SMNDC1-202ENST00000369603 BRMS1Q9HCU9 246 aa6.29□□□□□ -1.4
SMNDC1-202ENST00000369603 BTG4Q9NY30 223 aa6.29□□□□□ -1.4
SMNDC1-202ENST00000369603 NCAPD2Q15021 1401 aa6.29□□□□□ -1.4
SMNDC1-202ENST00000369603 PTPRUQ92729 1446 aa6.29□□□□□ -1.4
SMNDC1-202ENST00000369603 DIP2AQ14689 1571 aa6.29□□□□□ -1.4
SMNDC1-202ENST00000369603 ESPNB1AK53 854 aa6.29□□□□□ -1.4
SMNDC1-202ENST00000369603 SEC24BO95487 1268 aa6.29□□□□□ -1.4
SMNDC1-202ENST00000369603 GPTP24298 496 aa6.29□□□□□ -1.4
SMNDC1-202ENST00000369603 MAP3K12Q12852 859 aa6.29□□□□□ -1.4
SMNDC1-202ENST00000369603 CDC5LQ99459 802 aaKnown RBP6.29□□□□□ -1.4
SMNDC1-202ENST00000369603 GRPEL1Q9HAV7 217 aa6.29□□□□□ -1.4
SMNDC1-202ENST00000369603 LRP2BPQ9P2M1 347 aa6.29□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 130.8 ms