RNA–Protein interactions for RNA: ENST00000369236.5

GFRA1-203, Transcript of GDNF family receptor alpha 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene GFRA1, Length 9,109 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GFRA1-203ENST00000369236 TNPO1Q92973 898 aaKnown RBP13.79□□□□□ -0.2
GFRA1-203ENST00000369236 SERPINA10Q9UK55 444 aa13.79□□□□□ -0.2
GFRA1-203ENST00000369236 KANK4Q5T7N3 995 aaPredicted RBP13.79□□□□□ -0.2
GFRA1-203ENST00000369236 GGT6Q6P531 493 aa13.79□□□□□ -0.2
GFRA1-203ENST00000369236 BANK1Q8NDB2 785 aa13.78□□□□□ -0.2
GFRA1-203ENST00000369236 UBAC1Q9BSL1 405 aa13.78□□□□□ -0.2
GFRA1-203ENST00000369236 TSPYL2Q9H2G4 693 aaPredicted RBP13.78□□□□□ -0.2
GFRA1-203ENST00000369236 ZSCAN23Q3MJ62 389 aa13.78□□□□□ -0.2
GFRA1-203ENST00000369236 TSGA10Q9BZW7 698 aa13.78□□□□□ -0.2
GFRA1-203ENST00000369236 MACROD2A1Z1Q3 448 aa13.78□□□□□ -0.2
GFRA1-203ENST00000369236 RFC1P35251 1148 aaPredicted RBP13.78□□□□□ -0.2
GFRA1-203ENST00000369236 PAXIP1Q6ZW49 1069 aaPredicted RBP13.78□□□□□ -0.2
GFRA1-203ENST00000369236 ERCC6LQ2NKX8 1250 aa13.78□□□□□ -0.2
GFRA1-203ENST00000369236 ZKSCAN5Q9Y2L8 839 aa13.78□□□□□ -0.2
GFRA1-203ENST00000369236 KIF5AQ12840 1032 aa13.78□□□□□ -0.2
GFRA1-203ENST00000369236 INPP5BP32019 993 aa13.77□□□□□ -0.2
GFRA1-203ENST00000369236 ZNF428Q96B54 188 aa13.77□□□□□ -0.2
GFRA1-203ENST00000369236 GMNNO75496 209 aa13.77□□□□□ -0.2
GFRA1-203ENST00000369236 PSMC4P43686 418 aa13.77□□□□□ -0.21
GFRA1-203ENST00000369236 AFAP1L1Q8TED9 768 aa13.77□□□□□ -0.21
GFRA1-203ENST00000369236 COMMD10Q9Y6G5 202 aa13.77□□□□□ -0.21
GFRA1-203ENST00000369236 PRC1O43663 620 aa13.77□□□□□ -0.21
GFRA1-203ENST00000369236 ARHGAP24Q8N264 748 aa13.77□□□□□ -0.21
GFRA1-203ENST00000369236 TNIP1Q15025 636 aa13.77□□□□□ -0.21
GFRA1-203ENST00000369236 CNNM3Q8NE01 707 aa13.76□□□□□ -0.21
GFRA1-203ENST00000369236 CYLC1P35663 651 aaPredicted RBP13.76□□□□□ -0.21
GFRA1-203ENST00000369236 ZNF165P49910 485 aa13.76□□□□□ -0.21
GFRA1-203ENST00000369236 CCDC96Q2M329 555 aa13.76□□□□□ -0.21
GFRA1-203ENST00000369236 INTS8Q75QN2 995 aaKnown RBP13.76□□□□□ -0.21
GFRA1-203ENST00000369236 SEC63Q9UGP8 760 aaKnown RBP13.76□□□□□ -0.21
GFRA1-203ENST00000369236 AMPD3Q01432 767 aa13.76□□□□□ -0.21
GFRA1-203ENST00000369236 PRPF4BQ13523 1007 aaKnown RBP13.76□□□□□ -0.21
GFRA1-203ENST00000369236 NOB1Q9ULX3 412 aaKnown RBP13.76□□□□□ -0.21
GFRA1-203ENST00000369236 SSX2IPQ9Y2D8 614 aa13.76□□□□□ -0.21
GFRA1-203ENST00000369236 APBB1IPQ7Z5R6 666 aaPredicted RBP13.76□□□□□ -0.21
GFRA1-203ENST00000369236 KDM4AO75164 1064 aa13.76□□□□□ -0.21
GFRA1-203ENST00000369236 SSBP05455 408 aaKnown RBP eCLIP13.76□□□□□ -0.21
GFRA1-203ENST00000369236 NKTRP30414 1462 aaKnown RBP13.76□□□□□ -0.21
GFRA1-203ENST00000369236 VAV2P52735 878 aa13.75□□□□□ -0.21
GFRA1-203ENST00000369236 KIF6Q6ZMV9 814 aa13.75□□□□□ -0.21
GFRA1-203ENST00000369236 NUF2Q9BZD4 464 aa13.75□□□□□ -0.21
GFRA1-203ENST00000369236 HOMEZQ8IX15 550 aa13.75□□□□□ -0.21
GFRA1-203ENST00000369236 DRC1Q96MC2 740 aa13.75□□□□□ -0.21
GFRA1-203ENST00000369236 ATP6V1AP38606 617 aa13.75□□□□□ -0.21
GFRA1-203ENST00000369236 TERF1P54274 439 aa13.75□□□□□ -0.21
GFRA1-203ENST00000369236 TUBB2AQ13885 445 aa13.75□□□□□ -0.21
GFRA1-203ENST00000369236 TUBB2BQ9BVA1 445 aa13.75□□□□□ -0.21
GFRA1-203ENST00000369236 MTUS1Q9ULD2 1270 aa13.75□□□□□ -0.21
GFRA1-203ENST00000369236 TRIM35Q9UPQ4 493 aa13.75□□□□□ -0.21
GFRA1-203ENST00000369236 TRAK1Q9UPV9 953 aa13.75□□□□□ -0.21
GFRA1-203ENST00000369236 TMEM266Q2M3C6 531 aa13.75□□□□□ -0.21
GFRA1-203ENST00000369236 ZEB2O60315 1214 aa13.75□□□□□ -0.21
GFRA1-203ENST00000369236 ATP2A2P16615 1042 aaKnown RBP13.75□□□□□ -0.21
GFRA1-203ENST00000369236 NOP2P46087 812 aaKnown RBP13.75□□□□□ -0.21
GFRA1-203ENST00000369236 ZNF287Q9HBT7 754 aa13.75□□□□□ -0.21
GFRA1-203ENST00000369236 IRX4P78413 519 aa13.74□□□□□ -0.21
GFRA1-203ENST00000369236 SF3B2Q13435 895 aaKnown RBP13.74□□□□□ -0.21
GFRA1-203ENST00000369236 CEP85LQ5SZL2 805 aa13.74□□□□□ -0.21
GFRA1-203ENST00000369236 NEDD9Q14511 834 aa13.74□□□□□ -0.21
GFRA1-203ENST00000369236 SPATS2Q86XZ4 545 aaKnown RBP13.74□□□□□ -0.21
GFRA1-203ENST00000369236 SMARCA2P51531 1590 aa13.74□□□□□ -0.21
GFRA1-203ENST00000369236 SKILP12757 684 aa13.74□□□□□ -0.21
GFRA1-203ENST00000369236 TRPC3Q13507 836 aa13.74□□□□□ -0.21
GFRA1-203ENST00000369236 EFCAB2Q5VUJ9 269 aa13.74□□□□□ -0.21
GFRA1-203ENST00000369236 PPP4R3AQ6IN85 833 aa13.74□□□□□ -0.21
GFRA1-203ENST00000369236 ATF7IPQ6VMQ6 1270 aa13.74□□□□□ -0.21
GFRA1-203ENST00000369236 TBC1D5Q92609 795 aa13.74□□□□□ -0.21
GFRA1-203ENST00000369236 RMND1Q9NWS8 449 aa13.74□□□□□ -0.21
GFRA1-203ENST00000369236 C8orf76Q96K31 380 aa13.74□□□□□ -0.21
GFRA1-203ENST00000369236 SPATS2LQ9NUQ6 558 aaKnown RBP13.74□□□□□ -0.21
GFRA1-203ENST00000369236 GCKP35557 465 aa13.74□□□□□ -0.21
GFRA1-203ENST00000369236 FYB2Q5VWT5 728 aa13.74□□□□□ -0.21
GFRA1-203ENST00000369236 MIER3Q7Z3K6 550 aa13.74□□□□□ -0.21
GFRA1-203ENST00000369236 GBP5Q96PP8 586 aa13.74□□□□□ -0.21
GFRA1-203ENST00000369236 AKAP2Q9Y2D5 859 aa13.74□□□□□ -0.21
GFRA1-203ENST00000369236 C11orf95C9JLR9 678 aaPredicted RBP13.73□□□□□ -0.21
GFRA1-203ENST00000369236 DNA2P51530 1060 aa13.73□□□□□ -0.21
GFRA1-203ENST00000369236 LMBR1Q8WVP7 490 aa13.73□□□□□ -0.21
GFRA1-203ENST00000369236 PIBF1Q8WXW3 757 aa13.73□□□□□ -0.21
GFRA1-203ENST00000369236 MTMR7Q9Y216 660 aa13.73□□□□□ -0.21
GFRA1-203ENST00000369236 SMC1BQ8NDV3 1235 aa13.73□□□□□ -0.21
GFRA1-203ENST00000369236 KRT86O43790 486 aa13.73□□□□□ -0.21
GFRA1-203ENST00000369236 GIGYF1O75420 1035 aaPredicted RBP13.73□□□□□ -0.21
GFRA1-203ENST00000369236 SAMD1Q6SPF0 538 aaPredicted RBP13.73□□□□□ -0.21
GFRA1-203ENST00000369236 KIAA1524Q8TCG1 905 aa13.73□□□□□ -0.21
GFRA1-203ENST00000369236 EVA1CP58658 441 aa13.73□□□□□ -0.21
GFRA1-203ENST00000369236 FYCO1Q9BQS8 1478 aa13.73□□□□□ -0.21
GFRA1-203ENST00000369236 TTC21AQ8NDW8 1320 aa13.73□□□□□ -0.21
GFRA1-203ENST00000369236 MTIF2P46199 727 aaKnown RBP13.73□□□□□ -0.21
GFRA1-203ENST00000369236 PRR16Q569H4 304 aa13.73□□□□□ -0.21
GFRA1-203ENST00000369236 RNF10Q8N5U6 811 aaKnown RBP13.73□□□□□ -0.21
GFRA1-203ENST00000369236 FERMT2Q96AC1 680 aa13.72□□□□□ -0.21
GFRA1-203ENST00000369236 RASSF2P50749 326 aa13.72□□□□□ -0.21
GFRA1-203ENST00000369236 KRT83P78385 493 aa13.72□□□□□ -0.21
GFRA1-203ENST00000369236 RPAINQ86UA6 219 aa13.72□□□□□ -0.21
GFRA1-203ENST00000369236 A0A087WZG4 1122 aa13.72□□□□□ -0.21
GFRA1-203ENST00000369236 CCDC40Q4G0X9 1142 aa13.72□□□□□ -0.21
GFRA1-203ENST00000369236 SLC8A1P32418 973 aa13.72□□□□□ -0.21
GFRA1-203ENST00000369236 CCDC14Q49A88 953 aa13.72□□□□□ -0.21
GFRA1-203ENST00000369236 RAB3IPQ96QF0 476 aaPredicted RBP13.72□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms