RNA–Protein interactions for RNA: ENST00000369047.8

ECM1-202, Transcript of extracellular matrix protein 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene ECM1, Length 2,070 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECM1-202ENST00000369047 DDX11L8A8MPP1 907 aa16.12■□□□□ 0.17
ECM1-202ENST00000369047 EPB41L2O43491 1005 aaKnown RBP16.12■□□□□ 0.17
ECM1-202ENST00000369047 TUBGCP6Q96RT7 1819 aa16.12■□□□□ 0.17
ECM1-202ENST00000369047 PTMSP20962 102 aa16.11■□□□□ 0.17
ECM1-202ENST00000369047 MTX1Q13505 466 aa16.11■□□□□ 0.17
ECM1-202ENST00000369047 KIF1BPQ96EK5 621 aa16.11■□□□□ 0.17
ECM1-202ENST00000369047 RBM42Q9BTD8 480 aaKnown RBP16.11■□□□□ 0.17
ECM1-202ENST00000369047 BRWD3Q6RI45 1802 aa16.11■□□□□ 0.17
ECM1-202ENST00000369047 ST18O60284 1047 aa16.1■□□□□ 0.17
ECM1-202ENST00000369047 SURF6O75683 361 aaKnown RBP16.1■□□□□ 0.17
ECM1-202ENST00000369047 DDX58O95786 925 aaKnown RBP16.1■□□□□ 0.17
ECM1-202ENST00000369047 SRGAP3O43295 1099 aa16.1■□□□□ 0.17
ECM1-202ENST00000369047 CD2BP2O95400 341 aaKnown RBP16.1■□□□□ 0.17
ECM1-202ENST00000369047 NBPF7P0C2Y1 421 aaPredicted RBP16.1■□□□□ 0.17
ECM1-202ENST00000369047 RAB3GAP1Q15042 981 aa16.1■□□□□ 0.17
ECM1-202ENST00000369047 DDX21Q9NR30 783 aaKnown RBP eCLIP16.1■□□□□ 0.17
ECM1-202ENST00000369047 MEGF6O75095 1541 aa16.1■□□□□ 0.17
ECM1-202ENST00000369047 GBP4Q96PP9 640 aa16.09■□□□□ 0.17
ECM1-202ENST00000369047 SLC52A2Q9HAB3 445 aa16.09■□□□□ 0.17
ECM1-202ENST00000369047 SCN11AQ9UI33 1791 aa16.09■□□□□ 0.17
ECM1-202ENST00000369047 PKD1L3Q7Z443 1732 aa16.09■□□□□ 0.17
ECM1-202ENST00000369047 IFNL2Q8IZJ0 200 aa16.09■□□□□ 0.17
ECM1-202ENST00000369047 ZCRB1Q8TBF4 217 aaKnown RBP16.09■□□□□ 0.17
ECM1-202ENST00000369047 RHPN1Q8TCX5 695 aa16.09■□□□□ 0.17
ECM1-202ENST00000369047 ESYT1Q9BSJ8 1104 aa16.09■□□□□ 0.17
ECM1-202ENST00000369047 MAP3K2Q9Y2U5 619 aa16.09■□□□□ 0.17
ECM1-202ENST00000369047 PHKG2P15735 406 aa16.08■□□□□ 0.16
ECM1-202ENST00000369047 ZNF790Q6PG37 636 aa16.08■□□□□ 0.16
ECM1-202ENST00000369047 PCDH11XQ9BZA7 1347 aa16.08■□□□□ 0.16
ECM1-202ENST00000369047 PCDH11YQ9BZA8 1340 aa16.08■□□□□ 0.16
ECM1-202ENST00000369047 MCCP23508 829 aa16.07■□□□□ 0.16
ECM1-202ENST00000369047 CHMLP26374 656 aa16.07■□□□□ 0.16
ECM1-202ENST00000369047 LINS1Q8NG48 757 aa16.07■□□□□ 0.16
ECM1-202ENST00000369047 C9orf78Q9NZ63 289 aaPredicted RBP16.07■□□□□ 0.16
ECM1-202ENST00000369047 TRIM6-TRIM34B2RNG4 842 aa16.07■□□□□ 0.16
ECM1-202ENST00000369047 ANAPC15P60006 121 aa16.07■□□□□ 0.16
ECM1-202ENST00000369047 FAM196AQ6ZSG2 479 aa16.07■□□□□ 0.16
ECM1-202ENST00000369047 CWC22Q9HCG8 908 aaKnown RBP16.07■□□□□ 0.16
ECM1-202ENST00000369047 ANXA1P04083 346 aa16.06■□□□□ 0.16
ECM1-202ENST00000369047 ILDR2Q71H61 639 aa16.06■□□□□ 0.16
ECM1-202ENST00000369047 TNPO1Q92973 898 aaKnown RBP16.06■□□□□ 0.16
ECM1-202ENST00000369047 RILPL2Q969X0 211 aa16.06■□□□□ 0.16
ECM1-202ENST00000369047 DCAF5Q96JK2 942 aa16.06■□□□□ 0.16
ECM1-202ENST00000369047 BCL9O00512 1426 aa16.06■□□□□ 0.16
ECM1-202ENST00000369047 UTYO14607 1347 aa16.06■□□□□ 0.16
ECM1-202ENST00000369047 CLEC17AQ6ZS10 378 aa16.06■□□□□ 0.16
ECM1-202ENST00000369047 ERC1Q8IUD2 1116 aa16.06■□□□□ 0.16
ECM1-202ENST00000369047 TRAK2O60296 914 aa16.05■□□□□ 0.16
ECM1-202ENST00000369047 MCM2P49736 904 aa16.05■□□□□ 0.16
ECM1-202ENST00000369047 SKOR2Q2VWA4 1001 aaPredicted RBP16.05■□□□□ 0.16
ECM1-202ENST00000369047 IL17RAQ96F46 866 aa16.05■□□□□ 0.16
ECM1-202ENST00000369047 IL1RAPL2Q9NP60 686 aa16.05■□□□□ 0.16
ECM1-202ENST00000369047 USP42Q9H9J4 1324 aaKnown RBP16.05■□□□□ 0.16
ECM1-202ENST00000369047 PROSER3Q2NL68 480 aa16.04■□□□□ 0.16
ECM1-202ENST00000369047 L1TD1Q5T7N2 865 aaKnown RBP16.04■□□□□ 0.16
ECM1-202ENST00000369047 KDM6AO15550 1401 aaPredicted RBP16.04■□□□□ 0.16
ECM1-202ENST00000369047 TTC41PQ6P2S7 1318 aa16.04■□□□□ 0.16
ECM1-202ENST00000369047 NUCB2P80303 420 aa16.04■□□□□ 0.16
ECM1-202ENST00000369047 PDIA6Q15084 440 aa16.04■□□□□ 0.16
ECM1-202ENST00000369047 NFATC2IPQ8NCF5 419 aa16.04■□□□□ 0.16
ECM1-202ENST00000369047 TSHZ3Q63HK5 1081 aa16.03■□□□□ 0.16
ECM1-202ENST00000369047 MRC1P22897 1456 aa16.03■□□□□ 0.16
ECM1-202ENST00000369047 SHANK3Q9BYB0 1731 aa16.03■□□□□ 0.16
ECM1-202ENST00000369047 GRM8O00222 908 aa16.03■□□□□ 0.16
ECM1-202ENST00000369047 NUTM1Q86Y26 1132 aa16.03■□□□□ 0.16
ECM1-202ENST00000369047 CCDC125Q86Z20 511 aa16.03■□□□□ 0.16
ECM1-202ENST00000369047 PI4K2BQ8TCG2 481 aa16.03■□□□□ 0.16
ECM1-202ENST00000369047 PRAMEF22A3QJZ6 481 aa16.02■□□□□ 0.15
ECM1-202ENST00000369047 SNRPA1P09661 255 aaKnown RBP16.02■□□□□ 0.15
ECM1-202ENST00000369047 NEXNQ0ZGT2 675 aa16.02■□□□□ 0.15
ECM1-202ENST00000369047 CNTROBQ8N137 903 aa16.02■□□□□ 0.15
ECM1-202ENST00000369047 CLASRPQ8N2M8 674 aaKnown RBP16.02■□□□□ 0.15
ECM1-202ENST00000369047 OS9Q13438 667 aaPredicted RBP16.01■□□□□ 0.15
ECM1-202ENST00000369047 TTC5Q8N0Z6 440 aa16.01■□□□□ 0.15
ECM1-202ENST00000369047 MARCH10Q8NA82 808 aaPredicted RBP16.01■□□□□ 0.15
ECM1-202ENST00000369047 DDX54Q8TDD1 881 aaKnown RBP16.01■□□□□ 0.15
ECM1-202ENST00000369047 GOLGA6L22H0YM25 854 aa16.01■□□□□ 0.15
ECM1-202ENST00000369047 GLRX3O76003 335 aaKnown RBP16.01■□□□□ 0.15
ECM1-202ENST00000369047 RIC3Q7Z5B4 369 aa16.01■□□□□ 0.15
ECM1-202ENST00000369047 AK9Q5TCS8 1911 aa16■□□□□ 0.15
ECM1-202ENST00000369047 SLC39A6Q13433 755 aa16■□□□□ 0.15
ECM1-202ENST00000369047 SF3B2Q13435 895 aaKnown RBP16■□□□□ 0.15
ECM1-202ENST00000369047 CWF19L2Q2TBE0 894 aaKnown RBP16■□□□□ 0.15
ECM1-202ENST00000369047 GPATCH3Q96I76 525 aa16■□□□□ 0.15
ECM1-202ENST00000369047 FMNL2Q96PY5 1086 aa16■□□□□ 0.15
ECM1-202ENST00000369047 ANO2Q9NQ90 1003 aa16■□□□□ 0.15
ECM1-202ENST00000369047 CYP27B1O15528 508 aa15.99■□□□□ 0.15
ECM1-202ENST00000369047 FOXD4L1Q9NU39 408 aa15.99■□□□□ 0.15
ECM1-202ENST00000369047 ISY1Q9ULR0 285 aaKnown RBP15.99■□□□□ 0.15
ECM1-202ENST00000369047 NEK4P51957 841 aa15.99■□□□□ 0.15
ECM1-202ENST00000369047 ZNF496Q96IT1 587 aaPredicted RBP15.99■□□□□ 0.15
ECM1-202ENST00000369047 METTL22Q9BUU2 404 aaPredicted RBP15.99■□□□□ 0.15
ECM1-202ENST00000369047 C5P01031 1676 aa15.98■□□□□ 0.15
ECM1-202ENST00000369047 AIMP1Q12904 312 aaKnown RBP15.98■□□□□ 0.15
ECM1-202ENST00000369047 CABP4P57796 275 aa15.98■□□□□ 0.15
ECM1-202ENST00000369047 NKX1-1Q15270 411 aaPredicted RBP15.98■□□□□ 0.15
ECM1-202ENST00000369047 ECHDC1Q9NTX5 307 aa15.98■□□□□ 0.15
ECM1-202ENST00000369047 NHSQ6T4R5 1651 aa15.97■□□□□ 0.15
ECM1-202ENST00000369047 G3BP1Q13283 466 aaKnown RBP eCLIP15.97■□□□□ 0.15
ECM1-202ENST00000369047 ANKRD13DQ6ZTN6 518 aa15.97■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms