RNA–Protein interactions for RNA: ENST00000368759.5

BCCIP-203, Transcript of BRCA2 and CDKN1A interacting protein, humanhuman

TSL 1 (best) BASIC

Gene BCCIP, Length 1,433 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BCCIP-203ENST00000368759 PDZRN3Q9UPQ7 1066 aa17.42■□□□□ 0.38
BCCIP-203ENST00000368759 NUDCQ9Y266 331 aa17.42■□□□□ 0.38
BCCIP-203ENST00000368759 NBPF26B4DH59 902 aa17.41■□□□□ 0.38
BCCIP-203ENST00000368759 NBPF10Q6P3W6 841 aaKnown RBP17.41■□□□□ 0.38
BCCIP-203ENST00000368759 NBPF15Q8N660 670 aa17.41■□□□□ 0.38
BCCIP-203ENST00000368759 LAMB4A4D0S4 1761 aa17.4■□□□□ 0.38
BCCIP-203ENST00000368759 SNRPA1P09661 255 aaKnown RBP17.4■□□□□ 0.38
BCCIP-203ENST00000368759 SRGNP10124 158 aa17.4■□□□□ 0.38
BCCIP-203ENST00000368759 VEGFAP15692 232 aaPredicted RBP17.4■□□□□ 0.38
BCCIP-203ENST00000368759 JMYQ8N9B5 988 aa17.4■□□□□ 0.38
BCCIP-203ENST00000368759 STYK1Q6J9G0 422 aa17.39■□□□□ 0.38
BCCIP-203ENST00000368759 DLG5Q8TDM6 1919 aa17.39■□□□□ 0.37
BCCIP-203ENST00000368759 LTBP3Q9NS15 1303 aa17.39■□□□□ 0.37
BCCIP-203ENST00000368759 KDM3BQ7LBC6 1761 aa17.39■□□□□ 0.37
BCCIP-203ENST00000368759 ST5P78524 1137 aa17.38■□□□□ 0.37
BCCIP-203ENST00000368759 PRPF40BQ6NWY9 871 aaKnown RBP17.38■□□□□ 0.37
BCCIP-203ENST00000368759 RTF1Q92541 710 aaKnown RBP17.38■□□□□ 0.37
BCCIP-203ENST00000368759 ERFEQ4G0M1 354 aa17.38■□□□□ 0.37
BCCIP-203ENST00000368759 CLEC4GQ6UXB4 293 aa17.38■□□□□ 0.37
BCCIP-203ENST00000368759 NPM2Q86SE8 214 aaKnown RBP17.38■□□□□ 0.37
BCCIP-203ENST00000368759 CNKSR1Q969H4 720 aa17.38■□□□□ 0.37
BCCIP-203ENST00000368759 HTATSF1O43719 755 aaKnown RBP17.37■□□□□ 0.37
BCCIP-203ENST00000368759 MASTLQ96GX5 879 aa17.37■□□□□ 0.37
BCCIP-203ENST00000368759 TAOK3Q9H2K8 898 aa17.37■□□□□ 0.37
BCCIP-203ENST00000368759 MIS18AQ9NYP9 233 aa17.37■□□□□ 0.37
BCCIP-203ENST00000368759 NPHP1O15259 732 aa17.36■□□□□ 0.37
BCCIP-203ENST00000368759 NBPF5PQ86XG9 351 aaPredicted RBP17.36■□□□□ 0.37
BCCIP-203ENST00000368759 C7orf43Q8WVR3 580 aa17.36■□□□□ 0.37
BCCIP-203ENST00000368759 HLFQ16534 295 aa17.35■□□□□ 0.37
BCCIP-203ENST00000368759 KLRG2A4D1S0 409 aaPredicted RBP17.34■□□□□ 0.37
BCCIP-203ENST00000368759 ZNF652Q9Y2D9 606 aa17.34■□□□□ 0.37
BCCIP-203ENST00000368759 RGL2O15211 777 aa17.33■□□□□ 0.36
BCCIP-203ENST00000368759 DDNO94850 711 aaPredicted RBP17.33■□□□□ 0.36
BCCIP-203ENST00000368759 TAF7Q15545 349 aaPredicted RBP17.33■□□□□ 0.36
BCCIP-203ENST00000368759 DPY19L2Q6NUT2 758 aa17.33■□□□□ 0.36
BCCIP-203ENST00000368759 PLEKHF1Q96S99 279 aa17.33■□□□□ 0.36
BCCIP-203ENST00000368759 NIP7Q9Y221 180 aaKnown RBP eCLIP17.33■□□□□ 0.36
BCCIP-203ENST00000368759 POTEIP0CG38 1075 aa17.32■□□□□ 0.36
BCCIP-203ENST00000368759 POTEJP0CG39 1038 aa17.32■□□□□ 0.36
BCCIP-203ENST00000368759 OLFM4Q6UX06 510 aa17.32■□□□□ 0.36
BCCIP-203ENST00000368759 ABCC12Q96J65 1359 aa17.32■□□□□ 0.36
BCCIP-203ENST00000368759 FAM177BA6PVY3 158 aa17.31■□□□□ 0.36
BCCIP-203ENST00000368759 NPR1P16066 1061 aa17.31■□□□□ 0.36
BCCIP-203ENST00000368759 SOGA3Q5TF21 947 aa17.31■□□□□ 0.36
BCCIP-203ENST00000368759 SNED1Q8TER0 1413 aa17.31■□□□□ 0.36
BCCIP-203ENST00000368759 PCNTO95613 3336 aa17.31■□□□□ 0.36
BCCIP-203ENST00000368759 COL13A1Q5TAT6 717 aaPredicted RBP17.3■□□□□ 0.36
BCCIP-203ENST00000368759 TPTE2Q6XPS3 522 aa17.3■□□□□ 0.36
BCCIP-203ENST00000368759 THUMPD2Q9BTF0 503 aaKnown RBP17.3■□□□□ 0.36
BCCIP-203ENST00000368759 NUP98P52948 1817 aa17.3■□□□□ 0.36
BCCIP-203ENST00000368759 CCDC93Q567U6 631 aa17.3■□□□□ 0.36
BCCIP-203ENST00000368759 ZNF541Q9H0D2 1346 aa17.29■□□□□ 0.36
BCCIP-203ENST00000368759 EIF4A1P60842 406 aaKnown RBP17.29■□□□□ 0.36
BCCIP-203ENST00000368759 FKBP4Q02790 459 aaKnown RBP eCLIP17.28■□□□□ 0.36
BCCIP-203ENST00000368759 NFE2L2Q16236 605 aa17.28■□□□□ 0.36
BCCIP-203ENST00000368759 TTLL7Q6ZT98 887 aa17.28■□□□□ 0.36
BCCIP-203ENST00000368759 NGEFQ8N5V2 710 aa17.28■□□□□ 0.36
BCCIP-203ENST00000368759 ZNF277Q9NRM2 450 aaPredicted RBP17.28■□□□□ 0.36
BCCIP-203ENST00000368759 SCN4AP35499 1836 aa17.27■□□□□ 0.36
BCCIP-203ENST00000368759 CHADLQ6NUI6 762 aa17.27■□□□□ 0.35
BCCIP-203ENST00000368759 NUTM1Q86Y26 1132 aa17.27■□□□□ 0.35
BCCIP-203ENST00000368759 PNISRQ8TF01 805 aaKnown RBP17.27■□□□□ 0.35
BCCIP-203ENST00000368759 L3MBTL3Q96JM7 780 aaPredicted RBP17.27■□□□□ 0.35
BCCIP-203ENST00000368759 COL4A5P29400 1685 aa17.27■□□□□ 0.35
BCCIP-203ENST00000368759 ADAMTSL1Q8N6G6 1762 aa17.26■□□□□ 0.35
BCCIP-203ENST00000368759 MAP3K15Q6ZN16 1313 aa17.26■□□□□ 0.35
BCCIP-203ENST00000368759 UBN2Q6ZU65 1347 aa17.26■□□□□ 0.35
BCCIP-203ENST00000368759 CRY2Q49AN0 593 aa17.26■□□□□ 0.35
BCCIP-203ENST00000368759 SLC51AQ86UW1 340 aa17.26■□□□□ 0.35
BCCIP-203ENST00000368759 ERVV-1B6SEH8 477 aa17.25■□□□□ 0.35
BCCIP-203ENST00000368759 TAF1DQ9H5J8 278 aaPredicted RBP17.25■□□□□ 0.35
BCCIP-203ENST00000368759 HSPA1AP0DMV8 641 aaKnown RBP17.24■□□□□ 0.35
BCCIP-203ENST00000368759 HSPA1BP0DMV9 641 aaKnown RBP17.24■□□□□ 0.35
BCCIP-203ENST00000368759 MYL6BP14649 208 aa17.24■□□□□ 0.35
BCCIP-203ENST00000368759 RRP7AQ9Y3A4 280 aaKnown RBP17.24■□□□□ 0.35
BCCIP-203ENST00000368759 IBTKQ9P2D0 1353 aaPredicted RBP17.24■□□□□ 0.35
BCCIP-203ENST00000368759 PASKQ96RG2 1323 aa17.24■□□□□ 0.35
BCCIP-203ENST00000368759 RIC1Q4ADV7 1423 aa17.24■□□□□ 0.35
BCCIP-203ENST00000368759 RTKN2Q8IZC4 609 aa17.23■□□□□ 0.35
BCCIP-203ENST00000368759 ZBTB3Q9H5J0 574 aa17.23■□□□□ 0.35
BCCIP-203ENST00000368759 NEFMP07197 916 aa17.22■□□□□ 0.35
BCCIP-203ENST00000368759 GPTP24298 496 aa17.22■□□□□ 0.35
BCCIP-203ENST00000368759 GTF2E1P29083 439 aaPredicted RBP17.22■□□□□ 0.35
BCCIP-203ENST00000368759 IARSP41252 1262 aaKnown RBP17.22■□□□□ 0.35
BCCIP-203ENST00000368759 SUSD4Q5VX71 490 aa17.22■□□□□ 0.35
BCCIP-203ENST00000368759 LRP10Q7Z4F1 713 aa17.22■□□□□ 0.35
BCCIP-203ENST00000368759 CREBZFQ9NS37 354 aa17.22■□□□□ 0.35
BCCIP-203ENST00000368759 IQCA1LA6NCM1 817 aa17.21■□□□□ 0.35
BCCIP-203ENST00000368759 FZD9O00144 591 aa17.21■□□□□ 0.35
BCCIP-203ENST00000368759 ALDH1B1P30837 517 aa17.21■□□□□ 0.35
BCCIP-203ENST00000368759 KIF6Q6ZMV9 814 aa17.21■□□□□ 0.35
BCCIP-203ENST00000368759 C3orf67Q6ZVT6 689 aa17.21■□□□□ 0.35
BCCIP-203ENST00000368759 LDHDQ86WU2 507 aa17.21■□□□□ 0.35
BCCIP-203ENST00000368759 ZNF34Q8IZ26 560 aa17.21■□□□□ 0.35
BCCIP-203ENST00000368759 SYNE4Q8N205 404 aa17.21■□□□□ 0.35
BCCIP-203ENST00000368759 NYXQ9GZU5 481 aa17.21■□□□□ 0.35
BCCIP-203ENST00000368759 MKRN1Q9UHC7 482 aaKnown RBP17.21■□□□□ 0.35
BCCIP-203ENST00000368759 LTBP1Q14766 1721 aa17.21■□□□□ 0.35
BCCIP-203ENST00000368759 MAPK8IP3Q9UPT6 1336 aa17.21■□□□□ 0.35
BCCIP-203ENST00000368759 NTSR2O95665 410 aa17.21■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms