RNA–Protein interactions for RNA: ENST00000368408.3

EFNA3-201, Transcript of ephrin A3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EFNA3, Length 1,782 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFNA3-201ENST00000368408 USP35Q9P2H5 1018 aa32.21■■■□□ 2.75
EFNA3-201ENST00000368408 NRAPQ86VF7 1730 aa32.21■■■□□ 2.75
EFNA3-201ENST00000368408 NBPF26B4DH59 902 aa32.2■■■□□ 2.75
EFNA3-201ENST00000368408 NBPF14Q5TI25 921 aa32.2■■■□□ 2.75
EFNA3-201ENST00000368408 NBPF10Q6P3W6 841 aaKnown RBP32.2■■■□□ 2.75
EFNA3-201ENST00000368408 NBPF15Q8N660 670 aa32.2■■■□□ 2.75
EFNA3-201ENST00000368408 SUCLG2Q96I99 432 aa32.19■■■□□ 2.74
EFNA3-201ENST00000368408 MYD88Q99836 296 aa32.19■■■□□ 2.74
EFNA3-201ENST00000368408 VSIG10Q8N0Z9 540 aa32.18■■■□□ 2.74
EFNA3-201ENST00000368408 CDCA7Q9BWT1 371 aaPredicted RBP32.17■■■□□ 2.74
EFNA3-201ENST00000368408 CASC1Q6TDU7 716 aa32.16■■■□□ 2.74
EFNA3-201ENST00000368408 TBC1D2Q9BYX2 928 aa32.16■■■□□ 2.74
EFNA3-201ENST00000368408 ITGB4P16144 1822 aa32.15■■■□□ 2.74
EFNA3-201ENST00000368408 THRAP3Q9Y2W1 955 aaKnown RBP32.15■■■□□ 2.74
EFNA3-201ENST00000368408 TEX13AQ9BXU3 409 aaPredicted RBP32.14■■■□□ 2.74
EFNA3-201ENST00000368408 NUP188Q5SRE5 1749 aa32.14■■■□□ 2.74
EFNA3-201ENST00000368408 PIP4K2AP48426 406 aaPredicted RBP32.14■■■□□ 2.74
EFNA3-201ENST00000368408 ERC1Q8IUD2 1116 aa32.14■■■□□ 2.74
EFNA3-201ENST00000368408 PIGBQ92521 554 aa32.14■■■□□ 2.74
EFNA3-201ENST00000368408 BICC1Q9H694 974 aaKnown RBP32.14■■■□□ 2.74
EFNA3-201ENST00000368408 USP42Q9H9J4 1324 aaKnown RBP32.13■■■□□ 2.73
EFNA3-201ENST00000368408 JCADQ9P266 1359 aa32.13■■■□□ 2.73
EFNA3-201ENST00000368408 EXOC5O00471 708 aa32.12■■■□□ 2.73
EFNA3-201ENST00000368408 AFDNP55196 1824 aaKnown RBP32.12■■■□□ 2.73
EFNA3-201ENST00000368408 BCL9O00512 1426 aa32.12■■■□□ 2.73
EFNA3-201ENST00000368408 PTCD1O75127 700 aaKnown RBP32.12■■■□□ 2.73
EFNA3-201ENST00000368408 IL1RAPL2Q9NP60 686 aa32.12■■■□□ 2.73
EFNA3-201ENST00000368408 NWD2Q9ULI1 1742 aa32.11■■■□□ 2.73
EFNA3-201ENST00000368408 SNX21Q969T3 373 aa32.11■■■□□ 2.73
EFNA3-201ENST00000368408 KIF2CQ99661 725 aa32.1■■■□□ 2.73
EFNA3-201ENST00000368408 SPATA31A1Q5TZJ5 1347 aa32.1■■■□□ 2.73
EFNA3-201ENST00000368408 A1BGP04217 495 aa32.09■■■□□ 2.73
EFNA3-201ENST00000368408 ATG3Q9NT62 314 aa32.09■■■□□ 2.73
EFNA3-201ENST00000368408 USP26Q9BXU7 913 aa32.07■■■□□ 2.72
EFNA3-201ENST00000368408 ASAP1Q9ULH1 1129 aa32.07■■■□□ 2.72
EFNA3-201ENST00000368408 CASP7P55210 303 aa32.07■■■□□ 2.72
EFNA3-201ENST00000368408 RABL6Q3YEC7 729 aaPredicted RBP32.07■■■□□ 2.72
EFNA3-201ENST00000368408 SLIT2O94813 1529 aa32.06■■■□□ 2.72
EFNA3-201ENST00000368408 TTLL7Q6ZT98 887 aa32.06■■■□□ 2.72
EFNA3-201ENST00000368408 PI4K2BQ8TCG2 481 aa32.06■■■□□ 2.72
EFNA3-201ENST00000368408 TTC41PQ6P2S7 1318 aa32.06■■■□□ 2.72
EFNA3-201ENST00000368408 TSHZ3Q63HK5 1081 aa32.05■■■□□ 2.72
EFNA3-201ENST00000368408 ERC2O15083 957 aa32.04■■■□□ 2.72
EFNA3-201ENST00000368408 REC8O95072 547 aa32.04■■■□□ 2.72
EFNA3-201ENST00000368408 ADAMTS2O95450 1211 aa32.04■■■□□ 2.72
EFNA3-201ENST00000368408 OS9Q13438 667 aaPredicted RBP32.04■■■□□ 2.72
EFNA3-201ENST00000368408 NUTM1Q86Y26 1132 aa32.04■■■□□ 2.72
EFNA3-201ENST00000368408 EPHA10Q5JZY3 1008 aa32.03■■■□□ 2.72
EFNA3-201ENST00000368408 CLASRPQ8N2M8 674 aaKnown RBP32.03■■■□□ 2.72
EFNA3-201ENST00000368408 PA2G4Q9UQ80 394 aaKnown RBP32.03■■■□□ 2.72
EFNA3-201ENST00000368408 H7C1W4 665 aa32.02■■■□□ 2.72
EFNA3-201ENST00000368408 SPATA31A5Q5VU36 1347 aa32.02■■■□□ 2.72
EFNA3-201ENST00000368408 SPATA31A7Q8IWB4 1347 aa32.02■■■□□ 2.72
EFNA3-201ENST00000368408 A0A087WZG4 1122 aa32.01■■■□□ 2.71
EFNA3-201ENST00000368408 G3BP1Q13283 466 aaKnown RBP eCLIP32.01■■■□□ 2.71
EFNA3-201ENST00000368408 COPRSQ9NQ92 184 aa32.01■■■□□ 2.71
EFNA3-201ENST00000368408 ATP5J2-PTCD1G3V325 749 aa32■■■□□ 2.71
EFNA3-201ENST00000368408 STARD3NLO95772 234 aa32■■■□□ 2.71
EFNA3-201ENST00000368408 DNAJC10Q8IXB1 793 aa32■■■□□ 2.71
EFNA3-201ENST00000368408 CCDC191Q8NCU4 936 aa32■■■□□ 2.71
EFNA3-201ENST00000368408 TJP1Q07157 1748 aa32■■■□□ 2.71
EFNA3-201ENST00000368408 CHMLP26374 656 aa31.99■■■□□ 2.71
EFNA3-201ENST00000368408 BARGINQ6ZT62 677 aa31.99■■■□□ 2.71
EFNA3-201ENST00000368408 HSCBQ8IWL3 235 aa31.99■■■□□ 2.71
EFNA3-201ENST00000368408 ANTXR1Q9H6X2 564 aa31.99■■■□□ 2.71
EFNA3-201ENST00000368408 CWC25Q9NXE8 425 aaPredicted RBP31.99■■■□□ 2.71
EFNA3-201ENST00000368408 RFX5P48382 616 aaPredicted RBP31.99■■■□□ 2.71
EFNA3-201ENST00000368408 UBE3BQ7Z3V4 1068 aa31.99■■■□□ 2.71
EFNA3-201ENST00000368408 SPATA31A6Q5VVP1 1343 aa31.98■■■□□ 2.71
EFNA3-201ENST00000368408 SASH1O94885 1247 aa31.98■■■□□ 2.71
EFNA3-201ENST00000368408 ESYT1Q9BSJ8 1104 aa31.98■■■□□ 2.71
EFNA3-201ENST00000368408 DOT1LQ8TEK3 1739 aa31.97■■■□□ 2.71
EFNA3-201ENST00000368408 TRIM6-TRIM34B2RNG4 842 aa31.96■■■□□ 2.71
EFNA3-201ENST00000368408 GLRX3O76003 335 aaKnown RBP31.96■■■□□ 2.71
EFNA3-201ENST00000368408 NBR1Q14596 966 aa31.96■■■□□ 2.71
EFNA3-201ENST00000368408 EPB41L2O43491 1005 aaKnown RBP31.96■■■□□ 2.71
EFNA3-201ENST00000368408 TRIM28Q13263 835 aaKnown RBP31.96■■■□□ 2.71
EFNA3-201ENST00000368408 DDB1Q16531 1140 aa31.96■■■□□ 2.71
EFNA3-201ENST00000368408 UNC5CLQ8IV45 518 aa31.96■■■□□ 2.71
EFNA3-201ENST00000368408 ISCA1Q9BUE6 129 aa31.96■■■□□ 2.71
EFNA3-201ENST00000368408 NUTM2BA6NNL0 878 aaPredicted RBP31.94■■■□□ 2.7
EFNA3-201ENST00000368408 NUTM2EB1AL46 878 aaPredicted RBP31.94■■■□□ 2.7
EFNA3-201ENST00000368408 NUTM2AQ8IVF1 878 aaPredicted RBP31.94■■■□□ 2.7
EFNA3-201ENST00000368408 RILPL2Q969X0 211 aa31.94■■■□□ 2.7
EFNA3-201ENST00000368408 GPATCH3Q96I76 525 aa31.94■■■□□ 2.7
EFNA3-201ENST00000368408 ECHDC1Q9NTX5 307 aa31.94■■■□□ 2.7
EFNA3-201ENST00000368408 RABEP1Q15276 862 aa31.94■■■□□ 2.7
EFNA3-201ENST00000368408 RBM42Q9BTD8 480 aaKnown RBP31.94■■■□□ 2.7
EFNA3-201ENST00000368408 SLC4A9Q96Q91 983 aa31.93■■■□□ 2.7
EFNA3-201ENST00000368408 ZBTB3Q9H5J0 574 aa31.93■■■□□ 2.7
EFNA3-201ENST00000368408 IFIT2P09913 472 aaKnown RBP31.92■■■□□ 2.7
EFNA3-201ENST00000368408 FOXO4P98177 505 aa31.92■■■□□ 2.7
EFNA3-201ENST00000368408 PTPN12Q05209 780 aaKnown RBP31.92■■■□□ 2.7
EFNA3-201ENST00000368408 TCIRG1Q13488 830 aa31.92■■■□□ 2.7
EFNA3-201ENST00000368408 AK9Q5TCS8 1911 aa31.92■■■□□ 2.7
EFNA3-201ENST00000368408 CYP19A1P11511 503 aaPredicted RBP31.91■■■□□ 2.7
EFNA3-201ENST00000368408 CNTROBQ8N137 903 aa31.91■■■□□ 2.7
EFNA3-201ENST00000368408 TNKS1BP1Q9C0C2 1729 aaKnown RBP31.91■■■□□ 2.7
EFNA3-201ENST00000368408 PRIM1P49642 420 aaKnown RBP31.91■■■□□ 2.7
EFNA3-201ENST00000368408 KIF6Q6ZMV9 814 aa31.89■■■□□ 2.7
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms