RNA–Protein interactions for RNA: ENST00000368378.7

THBS3-201, Transcript of thrombospondin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene THBS3, Length 3,145 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THBS3-201ENST00000368378 GNAI3P08754 354 aa10.67□□□□□ -0.7
THBS3-201ENST00000368378 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP10.67□□□□□ -0.7
THBS3-201ENST00000368378 PEAK1Q9H792 1746 aa10.67□□□□□ -0.7
THBS3-201ENST00000368378 AKAP12Q02952 1782 aa10.67□□□□□ -0.7
THBS3-201ENST00000368378 NPHP4O75161 1426 aaPredicted RBP10.67□□□□□ -0.7
THBS3-201ENST00000368378 PDZRN4Q6ZMN7 1036 aaPredicted RBP10.67□□□□□ -0.7
THBS3-201ENST00000368378 RHPN1Q8TCX5 695 aa10.67□□□□□ -0.7
THBS3-201ENST00000368378 SRCAPQ6ZRS2 3230 aa10.67□□□□□ -0.7
THBS3-201ENST00000368378 PTH1RQ03431 593 aa10.67□□□□□ -0.7
THBS3-201ENST00000368378 SLC39A6Q13433 755 aa10.67□□□□□ -0.7
THBS3-201ENST00000368378 ESCO1Q5FWF5 840 aa10.67□□□□□ -0.7
THBS3-201ENST00000368378 SECISBP2LQ93073 1101 aaKnown RBP10.67□□□□□ -0.7
THBS3-201ENST00000368378 TBX22Q9Y458 520 aa10.67□□□□□ -0.7
THBS3-201ENST00000368378 FLT4P35916 1363 aa10.67□□□□□ -0.7
THBS3-201ENST00000368378 SIPA1L2Q9P2F8 1722 aaPredicted RBP10.66□□□□□ -0.7
THBS3-201ENST00000368378 IFIT2P09913 472 aaKnown RBP10.66□□□□□ -0.7
THBS3-201ENST00000368378 AACSQ86V21 672 aa10.66□□□□□ -0.7
THBS3-201ENST00000368378 ADCY5O95622 1261 aa10.66□□□□□ -0.7
THBS3-201ENST00000368378 CYP2E1P05181 493 aaPredicted RBP10.66□□□□□ -0.7
THBS3-201ENST00000368378 ZNF445P59923 1031 aa10.66□□□□□ -0.7
THBS3-201ENST00000368378 ATP8B2P98198 1209 aa10.66□□□□□ -0.7
THBS3-201ENST00000368378 PROSER3Q2NL68 480 aa10.66□□□□□ -0.7
THBS3-201ENST00000368378 FAM227BQ96M60 508 aa10.66□□□□□ -0.7
THBS3-201ENST00000368378 EIF2AK3Q9NZJ5 1116 aaKnown RBP10.66□□□□□ -0.7
THBS3-201ENST00000368378 ADAMTS13Q76LX8 1427 aa10.66□□□□□ -0.7
THBS3-201ENST00000368378 GOLGA6L4A6NEF3 574 aa10.65□□□□□ -0.7
THBS3-201ENST00000368378 ZBTB22O15209 634 aa10.65□□□□□ -0.7
THBS3-201ENST00000368378 SYT1P21579 422 aa10.65□□□□□ -0.7
THBS3-201ENST00000368378 GJB2P29033 226 aa10.65□□□□□ -0.7
THBS3-201ENST00000368378 ERCC4Q92889 916 aaPredicted RBP10.65□□□□□ -0.7
THBS3-201ENST00000368378 ZBTB9Q96C00 473 aa10.65□□□□□ -0.7
THBS3-201ENST00000368378 OFD1O75665 1012 aa10.65□□□□□ -0.7
THBS3-201ENST00000368378 SLFNL1Q499Z3 407 aa10.65□□□□□ -0.7
THBS3-201ENST00000368378 PPP1R9BQ96SB3 815 aa10.65□□□□□ -0.7
THBS3-201ENST00000368378 ORAI2Q96SN7 254 aa10.65□□□□□ -0.7
THBS3-201ENST00000368378 TECPR2O15040 1411 aa10.64□□□□□ -0.71
THBS3-201ENST00000368378 BRD1O95696 1058 aa10.64□□□□□ -0.71
THBS3-201ENST00000368378 KIAA2012Q0VF49 1180 aa10.64□□□□□ -0.71
THBS3-201ENST00000368378 ZNF592Q92610 1267 aa10.64□□□□□ -0.71
THBS3-201ENST00000368378 CCDC85AQ96PX6 553 aaPredicted RBP10.64□□□□□ -0.71
THBS3-201ENST00000368378 ZKSCAN5Q9Y2L8 839 aa10.64□□□□□ -0.71
THBS3-201ENST00000368378 SBNO1A3KN83 1393 aa10.64□□□□□ -0.71
THBS3-201ENST00000368378 ARHGEF10O15013 1369 aa10.64□□□□□ -0.71
THBS3-201ENST00000368378 UBR1Q8IWV7 1749 aa10.64□□□□□ -0.71
THBS3-201ENST00000368378 SPDYE4A6NLX3 237 aa10.64□□□□□ -0.71
THBS3-201ENST00000368378 UBAP1LF5GYI3 381 aa10.64□□□□□ -0.71
THBS3-201ENST00000368378 ZNF530Q6P9A1 599 aaPredicted RBP10.64□□□□□ -0.71
THBS3-201ENST00000368378 RAB11FIP4Q86YS3 637 aa10.64□□□□□ -0.71
THBS3-201ENST00000368378 PRDM4Q9UKN5 801 aa10.64□□□□□ -0.71
THBS3-201ENST00000368378 SNX14Q9Y5W7 946 aa10.64□□□□□ -0.71
THBS3-201ENST00000368378 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP10.64□□□□□ -0.71
THBS3-201ENST00000368378 BTBD11A6QL63 1104 aa10.64□□□□□ -0.71
THBS3-201ENST00000368378 NPHP1O15259 732 aa10.64□□□□□ -0.71
THBS3-201ENST00000368378 STX6O43752 255 aa10.64□□□□□ -0.71
THBS3-201ENST00000368378 ATF3P18847 181 aa10.64□□□□□ -0.71
THBS3-201ENST00000368378 DNAJC2Q99543 621 aaKnown RBP10.64□□□□□ -0.71
THBS3-201ENST00000368378 ZHX1Q9UKY1 873 aaPredicted RBP10.64□□□□□ -0.71
THBS3-201ENST00000368378 TAF6LQ9Y6J9 622 aa10.64□□□□□ -0.71
THBS3-201ENST00000368378 PTPRUQ92729 1446 aa10.63□□□□□ -0.71
THBS3-201ENST00000368378 GOLGB1Q14789 3259 aaKnown RBP10.63□□□□□ -0.71
THBS3-201ENST00000368378 MBD3O95983 291 aa10.63□□□□□ -0.71
THBS3-201ENST00000368378 HOXC9P31274 260 aa10.63□□□□□ -0.71
THBS3-201ENST00000368378 ZC3H6P61129 1189 aaKnown RBP10.63□□□□□ -0.71
THBS3-201ENST00000368378 GUCY1B3Q02153 619 aa10.63□□□□□ -0.71
THBS3-201ENST00000368378 CLEC17AQ6ZS10 378 aa10.63□□□□□ -0.71
THBS3-201ENST00000368378 RUFY3Q7L099 469 aa10.63□□□□□ -0.71
THBS3-201ENST00000368378 CNTROBQ8N137 903 aa10.63□□□□□ -0.71
THBS3-201ENST00000368378 STK11IPQ8N1F8 1099 aa10.63□□□□□ -0.71
THBS3-201ENST00000368378 SYAP1Q96A49 352 aaPredicted RBP10.63□□□□□ -0.71
THBS3-201ENST00000368378 OSBPL3Q9H4L5 887 aa10.63□□□□□ -0.71
THBS3-201ENST00000368378 TLR7Q9NYK1 1049 aaKnown RBP10.63□□□□□ -0.71
THBS3-201ENST00000368378 MAP3K2Q9Y2U5 619 aa10.63□□□□□ -0.71
THBS3-201ENST00000368378 IGSF1Q8N6C5 1336 aa10.63□□□□□ -0.71
THBS3-201ENST00000368378 NRKQ7Z2Y5 1582 aa10.63□□□□□ -0.71
THBS3-201ENST00000368378 CBX1P83916 185 aa10.63□□□□□ -0.71
THBS3-201ENST00000368378 CLASRPQ8N2M8 674 aaKnown RBP10.63□□□□□ -0.71
THBS3-201ENST00000368378 FSD1Q9BTV5 496 aa10.63□□□□□ -0.71
THBS3-201ENST00000368378 PDRG1Q9NUG6 133 aa10.63□□□□□ -0.71
THBS3-201ENST00000368378 NOL7Q9UMY1 257 aaKnown RBP10.63□□□□□ -0.71
THBS3-201ENST00000368378 A0A0G2JS52 829 aa10.62□□□□□ -0.71
THBS3-201ENST00000368378 CCDC39Q9UFE4 941 aa10.62□□□□□ -0.71
THBS3-201ENST00000368378 RGPD8O14715 1765 aaPredicted RBP10.62□□□□□ -0.71
THBS3-201ENST00000368378 USP31Q70CQ4 1352 aa10.62□□□□□ -0.71
THBS3-201ENST00000368378 PSME1Q06323 249 aa10.62□□□□□ -0.71
THBS3-201ENST00000368378 NBPF6Q5VWK0 638 aa10.62□□□□□ -0.71
THBS3-201ENST00000368378 CCDC129Q6ZRS4 1044 aa10.62□□□□□ -0.71
THBS3-201ENST00000368378 CHST3Q7LGC8 479 aa10.62□□□□□ -0.71
THBS3-201ENST00000368378 NBPF4Q96M43 638 aa10.62□□□□□ -0.71
THBS3-201ENST00000368378 TTC21AQ8NDW8 1320 aa10.62□□□□□ -0.71
THBS3-201ENST00000368378 WDR33Q9C0J8 1336 aaKnown RBP10.62□□□□□ -0.71
THBS3-201ENST00000368378 TMEM94Q12767 1356 aa10.62□□□□□ -0.71
THBS3-201ENST00000368378 RAB11FIP3O75154 756 aa10.62□□□□□ -0.71
THBS3-201ENST00000368378 TPM2P07951 284 aa10.62□□□□□ -0.71
THBS3-201ENST00000368378 LARP1BQ659C4 914 aaKnown RBP10.62□□□□□ -0.71
THBS3-201ENST00000368378 DNAAF4Q8WXU2 420 aa10.62□□□□□ -0.71
THBS3-201ENST00000368378 ARHGAP23Q9P227 1491 aa10.62□□□□□ -0.71
THBS3-201ENST00000368378 SLIT1O75093 1534 aa10.62□□□□□ -0.71
THBS3-201ENST00000368378 ATP5J2-PTCD1G3V325 749 aa10.61□□□□□ -0.71
THBS3-201ENST00000368378 PTCD1O75127 700 aaKnown RBP10.61□□□□□ -0.71
THBS3-201ENST00000368378 TMED8Q6PL24 325 aaPredicted RBP10.61□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms