RNA–Protein interactions for RNA: ENST00000368102.5

SNHG28-201, Transcript of small nucleolar RNA host gene 28, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SNHG28, Length 2,501 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG28-201ENST00000368102 TATP17735 454 aaPredicted RBP17.08■□□□□ 0.32
SNHG28-201ENST00000368102 PDZRN4Q6ZMN7 1036 aaPredicted RBP17.08■□□□□ 0.32
SNHG28-201ENST00000368102 LARP6Q9BRS8 491 aaKnown RBP17.08■□□□□ 0.32
SNHG28-201ENST00000368102 RAB11FIP3O75154 756 aa17.07■□□□□ 0.32
SNHG28-201ENST00000368102 CHRNA2Q15822 529 aa17.07■□□□□ 0.32
SNHG28-201ENST00000368102 KIAA1211Q6ZU35 1233 aa17.07■□□□□ 0.32
SNHG28-201ENST00000368102 NUCB2P80303 420 aa17.07■□□□□ 0.32
SNHG28-201ENST00000368102 SLC39A6Q13433 755 aa17.07■□□□□ 0.32
SNHG28-201ENST00000368102 KSR2Q6VAB6 950 aa17.07■□□□□ 0.32
SNHG28-201ENST00000368102 MSNP26038 577 aaKnown RBP17.06■□□□□ 0.32
SNHG28-201ENST00000368102 PHKG2P15735 406 aa17.06■□□□□ 0.32
SNHG28-201ENST00000368102 ZSCAN23Q3MJ62 389 aa17.06■□□□□ 0.32
SNHG28-201ENST00000368102 ZNF790Q6PG37 636 aa17.06■□□□□ 0.32
SNHG28-201ENST00000368102 RHPN1Q8TCX5 695 aa17.06■□□□□ 0.32
SNHG28-201ENST00000368102 HYPKQ9NX55 129 aa17.06■□□□□ 0.32
SNHG28-201ENST00000368102 SPG7Q9UQ90 795 aa17.06■□□□□ 0.32
SNHG28-201ENST00000368102 SLC52A2Q9HAB3 445 aa17.05■□□□□ 0.32
SNHG28-201ENST00000368102 TNS3Q68CZ2 1445 aa17.05■□□□□ 0.32
SNHG28-201ENST00000368102 TPRNQ4KMQ1 711 aa17.05■□□□□ 0.32
SNHG28-201ENST00000368102 NFATC2IPQ8NCF5 419 aa17.05■□□□□ 0.32
SNHG28-201ENST00000368102 ALDH1L1O75891 902 aa17.04■□□□□ 0.32
SNHG28-201ENST00000368102 DDX21Q9NR30 783 aaKnown RBP eCLIP17.04■□□□□ 0.32
SNHG28-201ENST00000368102 C9orf78Q9NZ63 289 aaPredicted RBP17.04■□□□□ 0.32
SNHG28-201ENST00000368102 KDM6AO15550 1401 aaPredicted RBP17.04■□□□□ 0.32
SNHG28-201ENST00000368102 SPATA31A3Q5VYP0 1347 aa17.04■□□□□ 0.32
SNHG28-201ENST00000368102 MEGF6O75095 1541 aa17.04■□□□□ 0.32
SNHG28-201ENST00000368102 CWF19L2Q2TBE0 894 aaKnown RBP17.04■□□□□ 0.32
SNHG28-201ENST00000368102 KIF1BPQ96EK5 621 aa17.04■□□□□ 0.32
SNHG28-201ENST00000368102 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP17.04■□□□□ 0.32
SNHG28-201ENST00000368102 AIMP1Q12904 312 aaKnown RBP17.03■□□□□ 0.32
SNHG28-201ENST00000368102 PDIA6Q15084 440 aa17.03■□□□□ 0.32
SNHG28-201ENST00000368102 IFNL2Q8IZJ0 200 aa17.03■□□□□ 0.32
SNHG28-201ENST00000368102 ADAMTS7Q9UKP4 1686 aa17.03■□□□□ 0.32
SNHG28-201ENST00000368102 AOX1Q06278 1338 aa17.03■□□□□ 0.32
SNHG28-201ENST00000368102 TCHHQ07283 1943 aa17.03■□□□□ 0.32
SNHG28-201ENST00000368102 GDPD2Q9HCC8 539 aa17.03■□□□□ 0.32
SNHG28-201ENST00000368102 PRIM1P49642 420 aaKnown RBP17.02■□□□□ 0.32
SNHG28-201ENST00000368102 RBSNQ9H1K0 784 aa17.02■□□□□ 0.32
SNHG28-201ENST00000368102 SIPA1L3O60292 1781 aaPredicted RBP17.02■□□□□ 0.31
SNHG28-201ENST00000368102 MTX1Q13505 466 aa17.02■□□□□ 0.31
SNHG28-201ENST00000368102 CWC22Q9HCG8 908 aaKnown RBP17.02■□□□□ 0.31
SNHG28-201ENST00000368102 TMEM63CQ9P1W3 806 aa17.02■□□□□ 0.31
SNHG28-201ENST00000368102 COL18A1P39060 1754 aa17.01■□□□□ 0.31
SNHG28-201ENST00000368102 CYP27B1O15528 508 aa17.01■□□□□ 0.31
SNHG28-201ENST00000368102 DDX58O95786 925 aaKnown RBP17.01■□□□□ 0.31
SNHG28-201ENST00000368102 CPA1P15085 419 aa17.01■□□□□ 0.31
SNHG28-201ENST00000368102 HSP90AB4PQ58FF6 505 aa17.01■□□□□ 0.31
SNHG28-201ENST00000368102 LINS1Q8NG48 757 aa17.01■□□□□ 0.31
SNHG28-201ENST00000368102 PI4K2BQ8TCG2 481 aa17.01■□□□□ 0.31
SNHG28-201ENST00000368102 PDLIM2Q96JY6 352 aa17.01■□□□□ 0.31
SNHG28-201ENST00000368102 AEBP2Q6ZN18 517 aaPredicted RBP17■□□□□ 0.31
SNHG28-201ENST00000368102 ZNF500O60304 480 aaPredicted RBP17■□□□□ 0.31
SNHG28-201ENST00000368102 ZNF496Q96IT1 587 aaPredicted RBP17■□□□□ 0.31
SNHG28-201ENST00000368102 NOL7Q9UMY1 257 aaKnown RBP17■□□□□ 0.31
SNHG28-201ENST00000368102 PA2G4Q9UQ80 394 aaKnown RBP17■□□□□ 0.31
SNHG28-201ENST00000368102 SYCE3A1L190 88 aa16.99■□□□□ 0.31
SNHG28-201ENST00000368102 MYL6BP14649 208 aa16.99■□□□□ 0.31
SNHG28-201ENST00000368102 OS9Q13438 667 aaPredicted RBP16.99■□□□□ 0.31
SNHG28-201ENST00000368102 BRINP3Q76B58 766 aa16.99■□□□□ 0.31
SNHG28-201ENST00000368102 DCAF5Q96JK2 942 aa16.99■□□□□ 0.31
SNHG28-201ENST00000368102 XIRP1Q702N8 1843 aaKnown RBP16.99■□□□□ 0.31
SNHG28-201ENST00000368102 DDX54Q8TDD1 881 aaKnown RBP16.99■□□□□ 0.31
SNHG28-201ENST00000368102 MAP7D2Q96T17 732 aa16.99■□□□□ 0.31
SNHG28-201ENST00000368102 HDAC5Q9UQL6 1122 aa16.99■□□□□ 0.31
SNHG28-201ENST00000368102 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP16.99■□□□□ 0.31
SNHG28-201ENST00000368102 GRM8O00222 908 aa16.98■□□□□ 0.31
SNHG28-201ENST00000368102 RIC3Q7Z5B4 369 aa16.98■□□□□ 0.31
SNHG28-201ENST00000368102 CPDO75976 1380 aa16.98■□□□□ 0.31
SNHG28-201ENST00000368102 CWC27Q6UX04 472 aaKnown RBP16.98■□□□□ 0.31
SNHG28-201ENST00000368102 RASEFQ8IZ41 740 aa16.98■□□□□ 0.31
SNHG28-201ENST00000368102 SUCLG2Q96I99 432 aa16.97■□□□□ 0.31
SNHG28-201ENST00000368102 IGKV5-2P06315 115 aa16.97■□□□□ 0.31
SNHG28-201ENST00000368102 MCCP23508 829 aa16.97■□□□□ 0.31
SNHG28-201ENST00000368102 MCM5P33992 734 aa16.97■□□□□ 0.31
SNHG28-201ENST00000368102 TTC5Q8N0Z6 440 aa16.97■□□□□ 0.31
SNHG28-201ENST00000368102 XAGE3Q8WTP9 111 aa16.97■□□□□ 0.31
SNHG28-201ENST00000368102 KAZALD1Q96I82 304 aa16.97■□□□□ 0.31
SNHG28-201ENST00000368102 USP16Q9Y5T5 823 aa16.97■□□□□ 0.31
SNHG28-201ENST00000368102 LARP1Q6PKG0 1096 aaKnown RBP16.96■□□□□ 0.31
SNHG28-201ENST00000368102 COPS6Q7L5N1 327 aa16.96■□□□□ 0.31
SNHG28-201ENST00000368102 RNF214Q8ND24 703 aa16.96■□□□□ 0.31
SNHG28-201ENST00000368102 UTYO14607 1347 aa16.96■□□□□ 0.31
SNHG28-201ENST00000368102 SCN11AQ9UI33 1791 aa16.96■□□□□ 0.31
SNHG28-201ENST00000368102 GADD45BO75293 160 aaPredicted RBP16.96■□□□□ 0.3
SNHG28-201ENST00000368102 BRD1O95696 1058 aa16.96■□□□□ 0.3
SNHG28-201ENST00000368102 CUL4AQ13619 759 aa16.96■□□□□ 0.3
SNHG28-201ENST00000368102 ABCC6O95255 1503 aa16.95■□□□□ 0.3
SNHG28-201ENST00000368102 CRYBG1Q9Y4K1 1723 aa16.95■□□□□ 0.3
SNHG28-201ENST00000368102 SNRPA1P09661 255 aaKnown RBP16.95■□□□□ 0.3
SNHG28-201ENST00000368102 CLASRPQ8N2M8 674 aaKnown RBP16.95■□□□□ 0.3
SNHG28-201ENST00000368102 BICC1Q9H694 974 aaKnown RBP16.95■□□□□ 0.3
SNHG28-201ENST00000368102 COL9A3Q14050 684 aaPredicted RBP16.95■□□□□ 0.3
SNHG28-201ENST00000368102 HSPA4P34932 840 aa16.94■□□□□ 0.3
SNHG28-201ENST00000368102 PIP4K2AP48426 406 aaPredicted RBP16.94■□□□□ 0.3
SNHG28-201ENST00000368102 CABP4P57796 275 aa16.94■□□□□ 0.3
SNHG28-201ENST00000368102 NEXNQ0ZGT2 675 aa16.94■□□□□ 0.3
SNHG28-201ENST00000368102 PRDM11Q9NQV5 511 aa16.94■□□□□ 0.3
SNHG28-201ENST00000368102 PLEKHG2Q9H7P9 1386 aa16.94■□□□□ 0.3
SNHG28-201ENST00000368102 USP42Q9H9J4 1324 aaKnown RBP16.94■□□□□ 0.3
SNHG28-201ENST00000368102 CSPP1Q1MSJ5 1256 aa16.94■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms