RNA–Protein interactions for RNA: ENST00000367982.8

NR1I3-204, Transcript of nuclear receptor subfamily 1 group I member 3, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene NR1I3, Length 1,322 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1I3-204ENST00000367982 U2AF1Q01081 240 aaKnown RBP eCLIP11.29□□□□□ -0.6
NR1I3-204ENST00000367982 C9orf131Q5VYM1 1079 aa11.29□□□□□ -0.6
NR1I3-204ENST00000367982 ZC3H4Q9UPT8 1303 aaKnown RBP11.28□□□□□ -0.6
NR1I3-204ENST00000367982 PDZRN3Q9UPQ7 1066 aa11.28□□□□□ -0.6
NR1I3-204ENST00000367982 CARMIL3Q8ND23 1372 aa11.27□□□□□ -0.61
NR1I3-204ENST00000367982 H0YIN7 160 aa11.27□□□□□ -0.61
NR1I3-204ENST00000367982 KCNQ3O43525 872 aa11.27□□□□□ -0.61
NR1I3-204ENST00000367982 TBC1D9BQ66K14 1250 aa11.27□□□□□ -0.61
NR1I3-204ENST00000367982 RTF1Q92541 710 aaKnown RBP11.27□□□□□ -0.61
NR1I3-204ENST00000367982 BRIP1Q9BX63 1249 aa11.27□□□□□ -0.61
NR1I3-204ENST00000367982 TBC1D2BQ9UPU7 963 aa11.27□□□□□ -0.61
NR1I3-204ENST00000367982 DLEC1Q9Y238 1755 aa11.27□□□□□ -0.61
NR1I3-204ENST00000367982 SCN7AQ01118 1682 aa11.27□□□□□ -0.61
NR1I3-204ENST00000367982 RGL2O15211 777 aa11.26□□□□□ -0.61
NR1I3-204ENST00000367982 CAMTA2O94983 1202 aa11.26□□□□□ -0.61
NR1I3-204ENST00000367982 A1BGP04217 495 aa11.26□□□□□ -0.61
NR1I3-204ENST00000367982 SNRPA1P09661 255 aaKnown RBP11.26□□□□□ -0.61
NR1I3-204ENST00000367982 MCM10Q7L590 875 aa11.26□□□□□ -0.61
NR1I3-204ENST00000367982 PIP4P2Q8N4L2 257 aa11.26□□□□□ -0.61
NR1I3-204ENST00000367982 TTLL6Q8N841 843 aa11.26□□□□□ -0.61
NR1I3-204ENST00000367982 NMRK2Q9NPI5 230 aa11.26□□□□□ -0.61
NR1I3-204ENST00000367982 KDM2BQ8NHM5 1336 aa11.25□□□□□ -0.61
NR1I3-204ENST00000367982 PDE6BP35913 854 aa11.25□□□□□ -0.61
NR1I3-204ENST00000367982 PRR5LQ6MZQ0 368 aa11.25□□□□□ -0.61
NR1I3-204ENST00000367982 CLEC4GQ6UXB4 293 aa11.25□□□□□ -0.61
NR1I3-204ENST00000367982 NPM2Q86SE8 214 aaKnown RBP11.25□□□□□ -0.61
NR1I3-204ENST00000367982 C2CD5Q86YS7 1000 aa11.25□□□□□ -0.61
NR1I3-204ENST00000367982 RASEFQ8IZ41 740 aa11.25□□□□□ -0.61
NR1I3-204ENST00000367982 RNF181Q9P0P0 153 aa11.25□□□□□ -0.61
NR1I3-204ENST00000367982 USP16Q9Y5T5 823 aa11.25□□□□□ -0.61
NR1I3-204ENST00000367982 SBF1O95248 1867 aa11.25□□□□□ -0.61
NR1I3-204ENST00000367982 LMNB1P20700 586 aa11.24□□□□□ -0.61
NR1I3-204ENST00000367982 TAF7Q15545 349 aaPredicted RBP11.24□□□□□ -0.61
NR1I3-204ENST00000367982 BICDL1Q6ZP65 573 aa11.24□□□□□ -0.61
NR1I3-204ENST00000367982 RBM46Q8TBY0 533 aaKnown RBP11.24□□□□□ -0.61
NR1I3-204ENST00000367982 SETDB2Q96T68 719 aa11.24□□□□□ -0.61
NR1I3-204ENST00000367982 PRAMEF22A3QJZ6 481 aa11.23□□□□□ -0.61
NR1I3-204ENST00000367982 APLP1P51693 650 aa11.23□□□□□ -0.61
NR1I3-204ENST00000367982 PRELPP51888 382 aa11.23□□□□□ -0.61
NR1I3-204ENST00000367982 DZIP3Q86Y13 1208 aaKnown RBP11.23□□□□□ -0.61
NR1I3-204ENST00000367982 PLEKHF1Q96S99 279 aa11.23□□□□□ -0.61
NR1I3-204ENST00000367982 TSPYL2Q9H2G4 693 aaPredicted RBP11.23□□□□□ -0.61
NR1I3-204ENST00000367982 ZNF330Q9Y3S2 320 aaPredicted RBP11.23□□□□□ -0.61
NR1I3-204ENST00000367982 ANKRD31Q8N7Z5 1873 aa11.22□□□□□ -0.61
NR1I3-204ENST00000367982 NFKBIEO00221 500 aa11.22□□□□□ -0.61
NR1I3-204ENST00000367982 DCTN1Q14203 1278 aa11.22□□□□□ -0.61
NR1I3-204ENST00000367982 CNBD1Q8NA66 436 aa11.22□□□□□ -0.61
NR1I3-204ENST00000367982 BCORQ6W2J9 1755 aa11.22□□□□□ -0.61
NR1I3-204ENST00000367982 KLRG2A4D1S0 409 aaPredicted RBP11.21□□□□□ -0.61
NR1I3-204ENST00000367982 GLTPD2A6NH11 291 aa11.21□□□□□ -0.61
NR1I3-204ENST00000367982 NBPF26B4DH59 902 aa11.21□□□□□ -0.61
NR1I3-204ENST00000367982 RASSF7Q02833 373 aa11.21□□□□□ -0.61
NR1I3-204ENST00000367982 FSTL1Q12841 308 aa11.21□□□□□ -0.61
NR1I3-204ENST00000367982 NBPF10Q6P3W6 841 aaKnown RBP11.21□□□□□ -0.61
NR1I3-204ENST00000367982 NBPF15Q8N660 670 aa11.21□□□□□ -0.61
NR1I3-204ENST00000367982 DNAJC5GQ8N7S2 189 aa11.21□□□□□ -0.61
NR1I3-204ENST00000367982 ZNF652Q9Y2D9 606 aa11.21□□□□□ -0.61
NR1I3-204ENST00000367982 TNRC6CQ9HCJ0 1690 aaKnown RBP11.21□□□□□ -0.62
NR1I3-204ENST00000367982 ZNF316A6NFI3 1004 aaPredicted RBP11.2□□□□□ -0.62
NR1I3-204ENST00000367982 NEFMP07197 916 aa11.2□□□□□ -0.62
NR1I3-204ENST00000367982 SRGNP10124 158 aa11.2□□□□□ -0.62
NR1I3-204ENST00000367982 ST5P78524 1137 aa11.2□□□□□ -0.62
NR1I3-204ENST00000367982 STYK1Q6J9G0 422 aa11.2□□□□□ -0.62
NR1I3-204ENST00000367982 C16orf71Q8IYS4 520 aaPredicted RBP11.2□□□□□ -0.62
NR1I3-204ENST00000367982 PNISRQ8TF01 805 aaKnown RBP11.2□□□□□ -0.62
NR1I3-204ENST00000367982 PNNQ9H307 717 aaKnown RBP11.2□□□□□ -0.62
NR1I3-204ENST00000367982 RRAGCQ9HB90 399 aa11.2□□□□□ -0.62
NR1I3-204ENST00000367982 LTBP3Q9NS15 1303 aa11.19□□□□□ -0.62
NR1I3-204ENST00000367982 PIP4K2AP48426 406 aaPredicted RBP11.19□□□□□ -0.62
NR1I3-204ENST00000367982 NFE2L2Q16236 605 aa11.19□□□□□ -0.62
NR1I3-204ENST00000367982 CNKSR1Q969H4 720 aa11.19□□□□□ -0.62
NR1I3-204ENST00000367982 ZNF622Q969S3 477 aaKnown RBP eCLIP11.19□□□□□ -0.62
NR1I3-204ENST00000367982 MASTLQ96GX5 879 aa11.19□□□□□ -0.62
NR1I3-204ENST00000367982 COL11A2P13942 1736 aaPredicted RBP11.19□□□□□ -0.62
NR1I3-204ENST00000367982 C21orf2O43822 256 aa11.18□□□□□ -0.62
NR1I3-204ENST00000367982 VEGFAP15692 232 aaPredicted RBP11.18□□□□□ -0.62
NR1I3-204ENST00000367982 SOGA3Q5TF21 947 aa11.18□□□□□ -0.62
NR1I3-204ENST00000367982 TPTE2Q6XPS3 522 aa11.18□□□□□ -0.62
NR1I3-204ENST00000367982 NBPF5PQ86XG9 351 aaPredicted RBP11.18□□□□□ -0.62
NR1I3-204ENST00000367982 CCDC24Q8N4L8 307 aa11.18□□□□□ -0.62
NR1I3-204ENST00000367982 MIS18AQ9NYP9 233 aa11.18□□□□□ -0.62
NR1I3-204ENST00000367982 FER1L6Q2WGJ9 1857 aa11.18□□□□□ -0.62
NR1I3-204ENST00000367982 ERVV-1B6SEH8 477 aa11.17□□□□□ -0.62
NR1I3-204ENST00000367982 NPHP1O15259 732 aa11.17□□□□□ -0.62
NR1I3-204ENST00000367982 EIF4A1P60842 406 aaKnown RBP11.17□□□□□ -0.62
NR1I3-204ENST00000367982 RALBP1Q15311 655 aa11.17□□□□□ -0.62
NR1I3-204ENST00000367982 PRPF40BQ6NWY9 871 aaKnown RBP11.17□□□□□ -0.62
NR1I3-204ENST00000367982 C7orf43Q8WVR3 580 aa11.17□□□□□ -0.62
NR1I3-204ENST00000367982 KDM3BQ7LBC6 1761 aa11.17□□□□□ -0.62
NR1I3-204ENST00000367982 LAMB4A4D0S4 1761 aa11.16□□□□□ -0.62
NR1I3-204ENST00000367982 ARFGEF2Q9Y6D5 1785 aa11.16□□□□□ -0.62
NR1I3-204ENST00000367982 NPR1P16066 1061 aa11.16□□□□□ -0.62
NR1I3-204ENST00000367982 DPY19L2Q6NUT2 758 aa11.16□□□□□ -0.62
NR1I3-204ENST00000367982 SMC1BQ8NDV3 1235 aa11.16□□□□□ -0.62
NR1I3-204ENST00000367982 TAOK3Q9H2K8 898 aa11.16□□□□□ -0.62
NR1I3-204ENST00000367982 NIP7Q9Y221 180 aaKnown RBP eCLIP11.16□□□□□ -0.62
NR1I3-204ENST00000367982 DLG5Q8TDM6 1919 aa11.16□□□□□ -0.62
NR1I3-204ENST00000367982 TIAM2Q8IVF5 1701 aa11.16□□□□□ -0.62
NR1I3-204ENST00000367982 SLX4Q8IY92 1834 aa11.15□□□□□ -0.62
NR1I3-204ENST00000367982 POTECB2RU33 542 aa11.15□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms