RNA–Protein interactions for RNA: ENST00000367367.8

PTPRC-203, Transcript of protein tyrosine phosphatase, receptor type C, humanhuman

TSL 2

Gene PTPRC, Length 2,291 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRC-203ENST00000367367 LTV1Q96GA3 475 aaPredicted RBP4.27□□□□□ -1.73
PTPRC-203ENST00000367367 KCNK17Q96T54 332 aa4.27□□□□□ -1.73
PTPRC-203ENST00000367367 GPHNQ9NQX3 736 aaPredicted RBP4.27□□□□□ -1.73
PTPRC-203ENST00000367367 KNSTRNQ9Y448 316 aa4.27□□□□□ -1.73
PTPRC-203ENST00000367367 GOLGB1Q14789 3259 aaKnown RBP4.27□□□□□ -1.73
PTPRC-203ENST00000367367 RTL1A6NKG5 1358 aa4.27□□□□□ -1.73
PTPRC-203ENST00000367367 FLT4P35916 1363 aa4.27□□□□□ -1.73
PTPRC-203ENST00000367367 AMPHP49418 695 aa4.26□□□□□ -1.73
PTPRC-203ENST00000367367 NOM1Q5C9Z4 860 aaKnown RBP4.26□□□□□ -1.73
PTPRC-203ENST00000367367 TCP11L2Q8N4U5 519 aa4.26□□□□□ -1.73
PTPRC-203ENST00000367367 ANKRD24Q8TF21 1146 aa4.26□□□□□ -1.73
PTPRC-203ENST00000367367 CHMP4AQ9BY43 222 aa4.26□□□□□ -1.73
PTPRC-203ENST00000367367 IGSF5Q9NSI5 407 aa4.26□□□□□ -1.73
PTPRC-203ENST00000367367 UTRNP46939 3433 aa4.26□□□□□ -1.73
PTPRC-203ENST00000367367 BTAF1O14981 1849 aa4.26□□□□□ -1.73
PTPRC-203ENST00000367367 NSD2O96028 1365 aa4.26□□□□□ -1.73
PTPRC-203ENST00000367367 PER1O15534 1290 aaPredicted RBP4.26□□□□□ -1.73
PTPRC-203ENST00000367367 HSP90AB2PQ58FF8 381 aa4.26□□□□□ -1.73
PTPRC-203ENST00000367367 LCE2AQ5TA79 106 aaPredicted RBP4.26□□□□□ -1.73
PTPRC-203ENST00000367367 IP6K1Q92551 441 aa4.26□□□□□ -1.73
PTPRC-203ENST00000367367 DDX12PQ92771 950 aa4.26□□□□□ -1.73
PTPRC-203ENST00000367367 PCMTD1Q96MG8 357 aaPredicted RBP4.26□□□□□ -1.73
PTPRC-203ENST00000367367 NLRP2Q9NX02 1062 aa4.26□□□□□ -1.73
PTPRC-203ENST00000367367 VPS9D1Q9Y2B5 631 aa4.26□□□□□ -1.73
PTPRC-203ENST00000367367 ZNF330Q9Y3S2 320 aaPredicted RBP4.26□□□□□ -1.73
PTPRC-203ENST00000367367 TOGARAM1Q9Y4F4 1720 aa4.26□□□□□ -1.73
PTPRC-203ENST00000367367 DLG5Q8TDM6 1919 aa4.26□□□□□ -1.73
PTPRC-203ENST00000367367 DISP2A7MBM2 1401 aa4.26□□□□□ -1.73
PTPRC-203ENST00000367367 MEGF6O75095 1541 aa4.25□□□□□ -1.73
PTPRC-203ENST00000367367 C2orf72A6NCS6 295 aa4.25□□□□□ -1.73
PTPRC-203ENST00000367367 E9PSI1 815 aa4.25□□□□□ -1.73
PTPRC-203ENST00000367367 ZEB1P37275 1124 aaPredicted RBP4.25□□□□□ -1.73
PTPRC-203ENST00000367367 KRT27Q7Z3Y8 459 aa4.25□□□□□ -1.73
PTPRC-203ENST00000367367 USHBP1Q8N6Y0 703 aa4.25□□□□□ -1.73
PTPRC-203ENST00000367367 NHSQ6T4R5 1651 aa4.25□□□□□ -1.73
PTPRC-203ENST00000367367 TNS2Q63HR2 1409 aa4.25□□□□□ -1.73
PTPRC-203ENST00000367367 SMG6Q86US8 1419 aaKnown RBP4.25□□□□□ -1.73
PTPRC-203ENST00000367367 INSRP06213 1382 aa4.25□□□□□ -1.73
PTPRC-203ENST00000367367 NRG2O14511 850 aaPredicted RBP4.25□□□□□ -1.73
PTPRC-203ENST00000367367 GPR37L1O60883 481 aa4.25□□□□□ -1.73
PTPRC-203ENST00000367367 PTGDRQ13258 359 aa4.25□□□□□ -1.73
PTPRC-203ENST00000367367 MORC1Q86VD1 984 aa4.25□□□□□ -1.73
PTPRC-203ENST00000367367 UPF1Q92900 1129 aaKnown RBP eCLIP4.25□□□□□ -1.73
PTPRC-203ENST00000367367 CARD10Q9BWT7 1032 aa4.25□□□□□ -1.73
PTPRC-203ENST00000367367 CDHR5Q9HBB8 845 aa4.25□□□□□ -1.73
PTPRC-203ENST00000367367 KIAA1522Q9P206 1035 aaPredicted RBP4.25□□□□□ -1.73
PTPRC-203ENST00000367367 POLKQ9UBT6 870 aa4.25□□□□□ -1.73
PTPRC-203ENST00000367367 KIF24Q5T7B8 1368 aa4.25□□□□□ -1.73
PTPRC-203ENST00000367367 RREB1Q92766 1687 aa4.24□□□□□ -1.73
PTPRC-203ENST00000367367 SCN11AQ9UI33 1791 aa4.24□□□□□ -1.73
PTPRC-203ENST00000367367 RFX1P22670 979 aa4.24□□□□□ -1.73
PTPRC-203ENST00000367367 MDM2Q00987 491 aaPredicted RBP4.24□□□□□ -1.73
PTPRC-203ENST00000367367 NBPF6Q5VWK0 638 aa4.24□□□□□ -1.73
PTPRC-203ENST00000367367 GLMNQ92990 594 aa4.24□□□□□ -1.73
PTPRC-203ENST00000367367 NBPF4Q96M43 638 aa4.24□□□□□ -1.73
PTPRC-203ENST00000367367 NPDC1Q9NQX5 325 aaPredicted RBP4.24□□□□□ -1.73
PTPRC-203ENST00000367367 THRAP3Q9Y2W1 955 aaKnown RBP4.24□□□□□ -1.73
PTPRC-203ENST00000367367 NUP188Q5SRE5 1749 aa4.24□□□□□ -1.73
PTPRC-203ENST00000367367 RGPD3A6NKT7 1758 aaPredicted RBP4.24□□□□□ -1.73
PTPRC-203ENST00000367367 RGPD4Q7Z3J3 1758 aa4.24□□□□□ -1.73
PTPRC-203ENST00000367367 OVOS2A0A0G2JMS6 1433 aa4.24□□□□□ -1.73
PTPRC-203ENST00000367367 SLC34A2O95436 690 aa4.24□□□□□ -1.73
PTPRC-203ENST00000367367 ITGBL1O95965 494 aaPredicted RBP4.24□□□□□ -1.73
PTPRC-203ENST00000367367 DDX10Q13206 875 aaKnown RBP4.24□□□□□ -1.73
PTPRC-203ENST00000367367 PDE3BQ13370 1112 aa4.24□□□□□ -1.73
PTPRC-203ENST00000367367 DDB1Q16531 1140 aa4.24□□□□□ -1.73
PTPRC-203ENST00000367367 PPP4R3BQ5MIZ7 849 aa4.24□□□□□ -1.73
PTPRC-203ENST00000367367 MYSM1Q5VVJ2 828 aa4.24□□□□□ -1.73
PTPRC-203ENST00000367367 STK17AQ9UEE5 414 aa4.24□□□□□ -1.73
PTPRC-203ENST00000367367 NPC1L1Q9UHC9 1359 aa4.24□□□□□ -1.73
PTPRC-203ENST00000367367 COL3A1P02461 1466 aaPredicted RBP4.23□□□□□ -1.73
PTPRC-203ENST00000367367 TAF1LQ8IZX4 1826 aa4.23□□□□□ -1.73
PTPRC-203ENST00000367367 TUBGCP6Q96RT7 1819 aa4.23□□□□□ -1.73
PTPRC-203ENST00000367367 IL2RBP14784 551 aa4.23□□□□□ -1.73
PTPRC-203ENST00000367367 EIF4A2Q14240 407 aaKnown RBP4.23□□□□□ -1.73
PTPRC-203ENST00000367367 SKIV2LQ15477 1246 aaKnown RBP4.23□□□□□ -1.73
PTPRC-203ENST00000367367 FAM177A1Q8N128 213 aaPredicted RBP4.23□□□□□ -1.73
PTPRC-203ENST00000367367 BEGAINQ9BUH8 593 aa4.23□□□□□ -1.73
PTPRC-203ENST00000367367 LY75O60449 1722 aa4.23□□□□□ -1.73
PTPRC-203ENST00000367367 NCAPD2Q15021 1401 aa4.23□□□□□ -1.73
PTPRC-203ENST00000367367 KIF3CO14782 793 aa4.23□□□□□ -1.73
PTPRC-203ENST00000367367 MTHFSP49914 203 aa4.23□□□□□ -1.73
PTPRC-203ENST00000367367 HIC1Q14526 733 aa4.23□□□□□ -1.73
PTPRC-203ENST00000367367 LIMD1Q9UGP4 676 aa4.23□□□□□ -1.73
PTPRC-203ENST00000367367 TBC1D2BQ9UPU7 963 aa4.23□□□□□ -1.73
PTPRC-203ENST00000367367 IVNS1ABPQ9Y6Y0 642 aa4.23□□□□□ -1.73
PTPRC-203ENST00000367367 TRIM37O94972 964 aa4.22□□□□□ -1.73
PTPRC-203ENST00000367367 SSTR3P32745 418 aaPredicted RBP4.22□□□□□ -1.73
PTPRC-203ENST00000367367 RFC5P40937 340 aa4.22□□□□□ -1.73
PTPRC-203ENST00000367367 DEFB132Q7Z7B7 95 aa4.22□□□□□ -1.73
PTPRC-203ENST00000367367 MARCH10Q8NA82 808 aaPredicted RBP4.22□□□□□ -1.73
PTPRC-203ENST00000367367 EYA1Q99502 592 aa4.22□□□□□ -1.73
PTPRC-203ENST00000367367 CDCA7Q9BWT1 371 aaPredicted RBP4.22□□□□□ -1.73
PTPRC-203ENST00000367367 IGSF1Q8N6C5 1336 aa4.22□□□□□ -1.73
PTPRC-203ENST00000367367 PARD3Q8TEW0 1356 aa4.21□□□□□ -1.73
PTPRC-203ENST00000367367 SPDYE5A6NIY4 337 aa4.21□□□□□ -1.73
PTPRC-203ENST00000367367 EXOC5O00471 708 aa4.21□□□□□ -1.73
PTPRC-203ENST00000367367 SUZ12Q15022 739 aaKnown RBP4.21□□□□□ -1.73
PTPRC-203ENST00000367367 FAM196AQ6ZSG2 479 aa4.21□□□□□ -1.73
PTPRC-203ENST00000367367 PTF1AQ7RTS3 328 aa4.21□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms