RNA–Protein interactions for RNA: ENST00000367178.7

SCAF8-201, Transcript of SR-related CTD associated factor 8, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SCAF8, Length 5,057 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF8-201ENST00000367178 ALDH1L1O75891 902 aa19.3■□□□□ 0.68
SCAF8-201ENST00000367178 GUCY1B3Q02153 619 aa19.3■□□□□ 0.68
SCAF8-201ENST00000367178 FILIP1Q7Z7B0 1213 aa19.29■□□□□ 0.68
SCAF8-201ENST00000367178 TOM1O60784 492 aa19.29■□□□□ 0.68
SCAF8-201ENST00000367178 NUCB1Q02818 461 aa19.29■□□□□ 0.68
SCAF8-201ENST00000367178 KSR2Q6VAB6 950 aa19.29■□□□□ 0.68
SCAF8-201ENST00000367178 ANKRD44Q8N8A2 993 aa19.29■□□□□ 0.68
SCAF8-201ENST00000367178 EIF2AK4Q9P2K8 1649 aaKnown RBP19.29■□□□□ 0.68
SCAF8-201ENST00000367178 GOLGA8AA7E2F4 631 aa19.29■□□□□ 0.68
SCAF8-201ENST00000367178 SMTNL1A8MU46 457 aa19.29■□□□□ 0.68
SCAF8-201ENST00000367178 GRM8O00222 908 aa19.28■□□□□ 0.68
SCAF8-201ENST00000367178 LARP6Q9BRS8 491 aaKnown RBP19.28■□□□□ 0.68
SCAF8-201ENST00000367178 RFC4P35249 363 aa19.28■□□□□ 0.68
SCAF8-201ENST00000367178 CAMK4Q16566 473 aa19.28■□□□□ 0.68
SCAF8-201ENST00000367178 A0A1W2PP64 1363 aa19.28■□□□□ 0.68
SCAF8-201ENST00000367178 GCP02774 474 aa19.28■□□□□ 0.68
SCAF8-201ENST00000367178 CCT2P78371 535 aaKnown RBP19.28■□□□□ 0.68
SCAF8-201ENST00000367178 TBX22Q9Y458 520 aa19.28■□□□□ 0.68
SCAF8-201ENST00000367178 LDHCP07864 332 aa19.28■□□□□ 0.68
SCAF8-201ENST00000367178 ZNF219Q9P2Y4 722 aaPredicted RBP19.27■□□□□ 0.68
SCAF8-201ENST00000367178 ABCC1P33527 1531 aa19.27■□□□□ 0.68
SCAF8-201ENST00000367178 SSFA2P28290 1259 aa19.27■□□□□ 0.68
SCAF8-201ENST00000367178 EYA1Q99502 592 aa19.27■□□□□ 0.68
SCAF8-201ENST00000367178 RDXP35241 583 aaKnown RBP19.27■□□□□ 0.67
SCAF8-201ENST00000367178 ERCC4Q92889 916 aaPredicted RBP19.27■□□□□ 0.67
SCAF8-201ENST00000367178 EIF4G3O43432 1585 aaKnown RBP19.27■□□□□ 0.67
SCAF8-201ENST00000367178 UBAP1LF5GYI3 381 aa19.26■□□□□ 0.67
SCAF8-201ENST00000367178 NBPF6Q5VWK0 638 aa19.26■□□□□ 0.67
SCAF8-201ENST00000367178 NBPF5PQ86XG9 351 aaPredicted RBP19.26■□□□□ 0.67
SCAF8-201ENST00000367178 NBPF4Q96M43 638 aa19.26■□□□□ 0.67
SCAF8-201ENST00000367178 CCDC152Q4G0S7 254 aa19.26■□□□□ 0.67
SCAF8-201ENST00000367178 NCKAP5LQ9HCH0 1330 aa19.26■□□□□ 0.67
SCAF8-201ENST00000367178 YTHDC2Q9H6S0 1430 aaKnown RBP19.26■□□□□ 0.67
SCAF8-201ENST00000367178 UQCRFS1P1P0C7P4 283 aa19.26■□□□□ 0.67
SCAF8-201ENST00000367178 HAND2P61296 217 aa19.26■□□□□ 0.67
SCAF8-201ENST00000367178 NOM1Q5C9Z4 860 aaKnown RBP19.26■□□□□ 0.67
SCAF8-201ENST00000367178 LMBR1LQ6UX01 489 aa19.26■□□□□ 0.67
SCAF8-201ENST00000367178 ARHGEF12Q9NZN5 1544 aa19.26■□□□□ 0.67
SCAF8-201ENST00000367178 CCDC96Q2M329 555 aa19.26■□□□□ 0.67
SCAF8-201ENST00000367178 CATIPQ7Z7H3 387 aa19.26■□□□□ 0.67
SCAF8-201ENST00000367178 PHACTR3Q96KR7 559 aa19.25■□□□□ 0.67
SCAF8-201ENST00000367178 SDSP20132 328 aa19.25■□□□□ 0.67
SCAF8-201ENST00000367178 ACSBG1Q96GR2 724 aa19.25■□□□□ 0.67
SCAF8-201ENST00000367178 HMG20BQ9P0W2 317 aa19.25■□□□□ 0.67
SCAF8-201ENST00000367178 MYO6Q9UM54 1294 aa19.25■□□□□ 0.67
SCAF8-201ENST00000367178 IL2RBP14784 551 aa19.25■□□□□ 0.67
SCAF8-201ENST00000367178 ATP8B2P98198 1209 aa19.25■□□□□ 0.67
SCAF8-201ENST00000367178 NEK1Q96PY6 1258 aa19.25■□□□□ 0.67
SCAF8-201ENST00000367178 UTP3Q9NQZ2 479 aaKnown RBP eCLIP19.25■□□□□ 0.672e-6■■■■■ 56.3
SCAF8-201ENST00000367178 HSPA2P54652 639 aa19.25■□□□□ 0.67
SCAF8-201ENST00000367178 PDE1AP54750 535 aa19.25■□□□□ 0.67
SCAF8-201ENST00000367178 SETQ01105 290 aaPredicted RBP19.25■□□□□ 0.67
SCAF8-201ENST00000367178 SSRP1Q08945 709 aaKnown RBP19.25■□□□□ 0.67
SCAF8-201ENST00000367178 DDB1Q16531 1140 aa19.25■□□□□ 0.67
SCAF8-201ENST00000367178 PIK3C2GO75747 1445 aa19.25■□□□□ 0.67
SCAF8-201ENST00000367178 VAMP4O75379 141 aa19.24■□□□□ 0.67
SCAF8-201ENST00000367178 NFATC2IPQ8NCF5 419 aa19.24■□□□□ 0.67
SCAF8-201ENST00000367178 LINS1Q8NG48 757 aa19.24■□□□□ 0.67
SCAF8-201ENST00000367178 TBC1D32Q96NH3 1257 aa19.24■□□□□ 0.67
SCAF8-201ENST00000367178 USP16Q9Y5T5 823 aa19.24■□□□□ 0.67
SCAF8-201ENST00000367178 MAP3K19Q56UN5 1328 aa19.24■□□□□ 0.67
SCAF8-201ENST00000367178 ATP6V1AP38606 617 aa19.24■□□□□ 0.67
SCAF8-201ENST00000367178 CFAP100Q494V2 611 aa19.24■□□□□ 0.67
SCAF8-201ENST00000367178 TSPYL6Q8N831 410 aa19.24■□□□□ 0.67
SCAF8-201ENST00000367178 CFAP43Q8NDM7 1665 aa19.24■□□□□ 0.67
SCAF8-201ENST00000367178 ZFYVE9O95405 1425 aa19.24■□□□□ 0.67
SCAF8-201ENST00000367178 BAG3O95817 575 aa19.24■□□□□ 0.67
SCAF8-201ENST00000367178 PHAXQ9H814 394 aaKnown RBP19.24■□□□□ 0.67
SCAF8-201ENST00000367178 TXLNBQ8N3L3 684 aa19.23■□□□□ 0.67
SCAF8-201ENST00000367178 DISP1Q96F81 1524 aa19.23■□□□□ 0.67
SCAF8-201ENST00000367178 ATP2B3Q16720 1220 aa19.23■□□□□ 0.67
SCAF8-201ENST00000367178 TMEM67Q5HYA8 995 aa19.23■□□□□ 0.67
SCAF8-201ENST00000367178 CCDC183Q5T5S1 534 aa19.23■□□□□ 0.67
SCAF8-201ENST00000367178 TNPO1Q92973 898 aaKnown RBP19.23■□□□□ 0.67
SCAF8-201ENST00000367178 SMARCC1Q92922 1105 aaPredicted RBP19.23■□□□□ 0.67
SCAF8-201ENST00000367178 TRPM2O94759 1503 aa19.23■□□□□ 0.67
SCAF8-201ENST00000367178 FAM177A1Q8N128 213 aaPredicted RBP19.23■□□□□ 0.67
SCAF8-201ENST00000367178 CCDC194A0A1B0GVG4 234 aa19.22■□□□□ 0.67
SCAF8-201ENST00000367178 SPTY2D1Q68D10 685 aaPredicted RBP19.22■□□□□ 0.67
SCAF8-201ENST00000367178 IARSP41252 1262 aaKnown RBP19.22■□□□□ 0.67
SCAF8-201ENST00000367178 EIF5P55010 431 aaKnown RBP19.22■□□□□ 0.67
SCAF8-201ENST00000367178 ANO10Q9NW15 660 aa19.22■□□□□ 0.67
SCAF8-201ENST00000367178 PER1O15534 1290 aaPredicted RBP19.22■□□□□ 0.67
SCAF8-201ENST00000367178 KRT24Q2M2I5 525 aa19.22■□□□□ 0.67
SCAF8-201ENST00000367178 NCOA7Q8NI08 942 aa19.22■□□□□ 0.67
SCAF8-201ENST00000367178 PZPP20742 1482 aa19.22■□□□□ 0.67
SCAF8-201ENST00000367178 MAP3K5Q99683 1374 aa19.22■□□□□ 0.67
SCAF8-201ENST00000367178 GJB2P29033 226 aa19.22■□□□□ 0.67
SCAF8-201ENST00000367178 NLRP5P59047 1200 aa19.22■□□□□ 0.67
SCAF8-201ENST00000367178 MFSD6Q6ZSS7 791 aa19.22■□□□□ 0.67
SCAF8-201ENST00000367178 CCDC112Q8NEF3 446 aa19.22■□□□□ 0.67
SCAF8-201ENST00000367178 MICU3Q86XE3 530 aa19.21■□□□□ 0.67
SCAF8-201ENST00000367178 IL15P40933 162 aaPredicted RBP19.21■□□□□ 0.67
SCAF8-201ENST00000367178 MTERF4Q7Z6M4 381 aaKnown RBP19.21■□□□□ 0.67
SCAF8-201ENST00000367178 ANKRD18AQ8IVF6 992 aa19.21■□□□□ 0.67
SCAF8-201ENST00000367178 TSPY2A6NKD2 308 aa19.21■□□□□ 0.67
SCAF8-201ENST00000367178 STX6O43752 255 aa19.21■□□□□ 0.67
SCAF8-201ENST00000367178 ZFYP08048 801 aaPredicted RBP19.21■□□□□ 0.67
SCAF8-201ENST00000367178 HOXC9P31274 260 aa19.21■□□□□ 0.67
SCAF8-201ENST00000367178 PDE4BQ07343 736 aa19.21■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms