RNA–Protein interactions for RNA: ENST00000364047.1

RNU6-553P-201, Transcript of RNA, U6 small nuclear 553, pseudogene, humanhuman

BASIC

Gene RNU6-553P, Length 96 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-553P-201ENST00000364047 NEUROD4Q9HD90 331 aa8.29□□□□□ -1.08
RNU6-553P-201ENST00000364047 GPC6Q9Y625 555 aaPredicted RBP8.29□□□□□ -1.08
RNU6-553P-201ENST00000364047 FGFR3P22607 806 aa8.28□□□□□ -1.08
RNU6-553P-201ENST00000364047 ZNF385CQ66K41 422 aaPredicted RBP8.28□□□□□ -1.08
RNU6-553P-201ENST00000364047 NGLY1Q96IV0 654 aa8.28□□□□□ -1.08
RNU6-553P-201ENST00000364047 ACIN1Q9UKV3 1341 aaKnown RBP8.28□□□□□ -1.08
RNU6-553P-201ENST00000364047 KHNYNO15037 678 aaKnown RBP8.27□□□□□ -1.09
RNU6-553P-201ENST00000364047 WEE1P30291 646 aa8.27□□□□□ -1.09
RNU6-553P-201ENST00000364047 MAP2K3P46734 347 aa8.27□□□□□ -1.09
RNU6-553P-201ENST00000364047 SWI5Q1ZZU3 235 aa8.27□□□□□ -1.09
RNU6-553P-201ENST00000364047 SAMD5Q5TGI4 173 aa8.27□□□□□ -1.09
RNU6-553P-201ENST00000364047 ALDH16A1Q8IZ83 802 aa8.27□□□□□ -1.09
RNU6-553P-201ENST00000364047 C7orf43Q8WVR3 580 aa8.27□□□□□ -1.09
RNU6-553P-201ENST00000364047 KLRG1Q96E93 195 aa8.27□□□□□ -1.09
RNU6-553P-201ENST00000364047 FAM157BP0CG42 384 aa8.26□□□□□ -1.09
RNU6-553P-201ENST00000364047 MAPTP10636 758 aaKnown RBP8.26□□□□□ -1.09
RNU6-553P-201ENST00000364047 BMP4P12644 408 aa8.26□□□□□ -1.09
RNU6-553P-201ENST00000364047 CTBSQ01459 385 aa8.25□□□□□ -1.09
RNU6-553P-201ENST00000364047 MAP3K10Q02779 954 aa8.25□□□□□ -1.09
RNU6-553P-201ENST00000364047 TNP2Q05952 138 aa8.25□□□□□ -1.09
RNU6-553P-201ENST00000364047 LYPD4Q6UWN0 246 aa8.25□□□□□ -1.09
RNU6-553P-201ENST00000364047 VTI1AQ96AJ9 217 aa8.25□□□□□ -1.09
RNU6-553P-201ENST00000364047 HSH2DQ96JZ2 352 aa8.25□□□□□ -1.09
RNU6-553P-201ENST00000364047 ANKIB1Q9P2G1 1089 aa8.25□□□□□ -1.09
RNU6-553P-201ENST00000364047 TIMELESSQ9UNS1 1208 aa8.25□□□□□ -1.09
RNU6-553P-201ENST00000364047 FOXO3O43524 673 aa8.24□□□□□ -1.09
RNU6-553P-201ENST00000364047 PRMT3O60678 531 aa8.24□□□□□ -1.09
RNU6-553P-201ENST00000364047 CELA2BP08218 269 aaPredicted RBP8.24□□□□□ -1.09
RNU6-553P-201ENST00000364047 CD33P20138 364 aa8.24□□□□□ -1.09
RNU6-553P-201ENST00000364047 TMEM164Q5U3C3 297 aa8.24□□□□□ -1.09
RNU6-553P-201ENST00000364047 ACDQ96AP0 544 aa8.24□□□□□ -1.09
RNU6-553P-201ENST00000364047 PRIMPOLQ96LW4 560 aa8.24□□□□□ -1.09
RNU6-553P-201ENST00000364047 OXCT2Q9BYC2 517 aaPredicted RBP8.24□□□□□ -1.09
RNU6-553P-201ENST00000364047 C2CD2LO14523 706 aa8.23□□□□□ -1.09
RNU6-553P-201ENST00000364047 FAM69CQ0P6D2 419 aa8.23□□□□□ -1.09
RNU6-553P-201ENST00000364047 RTN1Q16799 776 aa8.23□□□□□ -1.09
RNU6-553P-201ENST00000364047 ZNF280CQ8ND82 737 aa8.23□□□□□ -1.09
RNU6-553P-201ENST00000364047 SUSD3Q96L08 255 aa8.23□□□□□ -1.09
RNU6-553P-201ENST00000364047 HCN2Q9UL51 889 aa8.23□□□□□ -1.09
RNU6-553P-201ENST00000364047 SUPT5HO00267 1087 aaKnown RBP8.22□□□□□ -1.09
RNU6-553P-201ENST00000364047 EFSO43281 561 aa8.22□□□□□ -1.09
RNU6-553P-201ENST00000364047 BCRP11274 1271 aa8.22□□□□□ -1.09
RNU6-553P-201ENST00000364047 HIF1AQ16665 826 aa8.22□□□□□ -1.09
RNU6-553P-201ENST00000364047 ARHGEF15O94989 841 aa8.21□□□□□ -1.1
RNU6-553P-201ENST00000364047 LAMC2Q13753 1193 aa8.21□□□□□ -1.1
RNU6-553P-201ENST00000364047 FAM182BQ5T319 152 aa8.21□□□□□ -1.1
RNU6-553P-201ENST00000364047 CEP63Q96MT8 703 aa8.21□□□□□ -1.1
RNU6-553P-201ENST00000364047 STRN4Q9NRL3 753 aa8.21□□□□□ -1.1
RNU6-553P-201ENST00000364047 MARK1Q9P0L2 795 aa8.21□□□□□ -1.1
RNU6-553P-201ENST00000364047 PPP1R15AO75807 674 aaPredicted RBP8.2□□□□□ -1.1
RNU6-553P-201ENST00000364047 FKBP5Q13451 457 aaPredicted RBP8.2□□□□□ -1.1
RNU6-553P-201ENST00000364047 OCLNQ16625 522 aa8.2□□□□□ -1.1
RNU6-553P-201ENST00000364047 QTRT2Q9H974 415 aaKnown RBP8.2□□□□□ -1.1
RNU6-553P-201ENST00000364047 ENAMQ9NRM1 1142 aa8.2□□□□□ -1.1
RNU6-553P-201ENST00000364047 GDF2Q9UK05 429 aaPredicted RBP8.2□□□□□ -1.1
RNU6-553P-201ENST00000364047 ADAMTS8Q9UP79 889 aa8.2□□□□□ -1.1
RNU6-553P-201ENST00000364047 ARAFP10398 606 aa8.19□□□□□ -1.1
RNU6-553P-201ENST00000364047 TYRO3Q06418 890 aa8.19□□□□□ -1.1
RNU6-553P-201ENST00000364047 GOLGA6L1Q8N7Z2 621 aa8.19□□□□□ -1.1
RNU6-553P-201ENST00000364047 CLP1Q92989 425 aaKnown RBP8.19□□□□□ -1.1
RNU6-553P-201ENST00000364047 BRD7Q9NPI1 651 aa8.19□□□□□ -1.1
RNU6-553P-201ENST00000364047 UTP3Q9NQZ2 479 aaKnown RBP eCLIP8.19□□□□□ -1.1
RNU6-553P-201ENST00000364047 OIP5O43482 229 aa8.18□□□□□ -1.1
RNU6-553P-201ENST00000364047 SFSWAPQ12872 951 aaKnown RBP8.18□□□□□ -1.1
RNU6-553P-201ENST00000364047 DGKZQ13574 1117 aa8.18□□□□□ -1.1
RNU6-553P-201ENST00000364047 BTLAQ7Z6A9 289 aa8.18□□□□□ -1.1
RNU6-553P-201ENST00000364047 LRRC4BQ9NT99 713 aa8.18□□□□□ -1.1
RNU6-553P-201ENST00000364047 KLK14Q9P0G3 267 aa8.18□□□□□ -1.1
RNU6-553P-201ENST00000364047 GGA1Q9UJY5 639 aa8.18□□□□□ -1.1
RNU6-553P-201ENST00000364047 PRR12Q9ULL5 1215 aa8.18□□□□□ -1.1
RNU6-553P-201ENST00000364047 TGFBR3LH3BV60 316 aa8.17□□□□□ -1.1
RNU6-553P-201ENST00000364047 IER5Q5VY09 327 aa8.17□□□□□ -1.1
RNU6-553P-201ENST00000364047 SLCO4C1Q6ZQN7 724 aa8.17□□□□□ -1.1
RNU6-553P-201ENST00000364047 NEDD1Q8NHV4 660 aa8.17□□□□□ -1.1
RNU6-553P-201ENST00000364047 ARID3AQ99856 593 aa8.17□□□□□ -1.1
RNU6-553P-201ENST00000364047 MKNK1Q9BUB5 465 aa8.17□□□□□ -1.1
RNU6-553P-201ENST00000364047 CXXC1Q9P0U4 656 aaPredicted RBP8.17□□□□□ -1.1
RNU6-553P-201ENST00000364047 DNMT3AQ9Y6K1 912 aaPredicted RBP8.17□□□□□ -1.1
RNU6-553P-201ENST00000364047 NEURL1BA8MQ27 555 aa8.16□□□□□ -1.1
RNU6-553P-201ENST00000364047 ADH6P28332 368 aa8.16□□□□□ -1.1
RNU6-553P-201ENST00000364047 MARSP56192 900 aaKnown RBP8.16□□□□□ -1.1
RNU6-553P-201ENST00000364047 GRIN2CQ14957 1233 aa8.16□□□□□ -1.1
RNU6-553P-201ENST00000364047 C1orf229Q6ZS94 237 aaPredicted RBP8.16□□□□□ -1.1
RNU6-553P-201ENST00000364047 GALNT6Q8NCL4 622 aa8.16□□□□□ -1.1
RNU6-553P-201ENST00000364047 EDARADDQ8WWZ3 215 aa8.16□□□□□ -1.1
RNU6-553P-201ENST00000364047 MYO19Q96H55 970 aa8.16□□□□□ -1.1
RNU6-553P-201ENST00000364047 AVENQ9NQS1 362 aaPredicted RBP8.16□□□□□ -1.1
RNU6-553P-201ENST00000364047 KCNH4Q9UQ05 1017 aa8.16□□□□□ -1.1
RNU6-553P-201ENST00000364047 BCS1LQ9Y276 419 aa8.16□□□□□ -1.1
RNU6-553P-201ENST00000364047 SHISA8B8ZZ34 492 aa8.15□□□□□ -1.1
RNU6-553P-201ENST00000364047 ATP2B4P23634 1241 aa8.15□□□□□ -1.1
RNU6-553P-201ENST00000364047 PCBP4P57723 403 aaKnown RBP8.15□□□□□ -1.1
RNU6-553P-201ENST00000364047 ZNF468Q5VIY5 522 aaPredicted RBP8.15□□□□□ -1.1
RNU6-553P-201ENST00000364047 KCNQ4P56696 695 aa8.14□□□□□ -1.11
RNU6-553P-201ENST00000364047 SPEM2Q0P670 501 aa8.14□□□□□ -1.11
RNU6-553P-201ENST00000364047 C11orf91Q3C1V1 193 aa8.14□□□□□ -1.11
RNU6-553P-201ENST00000364047 SLC30A3Q99726 388 aa8.14□□□□□ -1.11
RNU6-553P-201ENST00000364047 SLAIN2Q9P270 581 aa8.14□□□□□ -1.11
RNU6-553P-201ENST00000364047 LRFN2Q9ULH4 789 aa8.14□□□□□ -1.11
RNU6-553P-201ENST00000364047 IDH3AP50213 366 aa8.13□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms