RNA–Protein interactions for RNA: ENST00000364033.1

RNU1-42P-201, Transcript of RNA, U1 small nuclear 42, pseudogene, humanhuman

BASIC

Gene RNU1-42P, Length 160 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU1-42P-201ENST00000364033 ZNF790Q6PG37 636 aa2.05□□□□□ -2.08
RNU1-42P-201ENST00000364033 TPTE2Q6XPS3 522 aa2.05□□□□□ -2.08
RNU1-42P-201ENST00000364033 TTLL7Q6ZT98 887 aa2.05□□□□□ -2.08
RNU1-42P-201ENST00000364033 C3orf67Q6ZVT6 689 aa2.05□□□□□ -2.08
RNU1-42P-201ENST00000364033 MIER1Q8N108 512 aa2.05□□□□□ -2.08
RNU1-42P-201ENST00000364033 CNTROBQ8N137 903 aa2.05□□□□□ -2.08
RNU1-42P-201ENST00000364033 NBPF15Q8N660 670 aa2.05□□□□□ -2.08
RNU1-42P-201ENST00000364033 CNBD1Q8NA66 436 aa2.05□□□□□ -2.08
RNU1-42P-201ENST00000364033 RTF1Q92541 710 aaKnown RBP2.05□□□□□ -2.08
RNU1-42P-201ENST00000364033 MASTLQ96GX5 879 aa2.05□□□□□ -2.08
RNU1-42P-201ENST00000364033 FMNL2Q96PY5 1086 aa2.05□□□□□ -2.08
RNU1-42P-201ENST00000364033 BRIP1Q9BX63 1249 aa2.05□□□□□ -2.08
RNU1-42P-201ENST00000364033 TAOK3Q9H2K8 898 aa2.05□□□□□ -2.08
RNU1-42P-201ENST00000364033 ZBTB3Q9H5J0 574 aa2.05□□□□□ -2.08
RNU1-42P-201ENST00000364033 ZNF408Q9H9D4 720 aa2.05□□□□□ -2.08
RNU1-42P-201ENST00000364033 IGSF5Q9NSI5 407 aa2.05□□□□□ -2.08
RNU1-42P-201ENST00000364033 ABT1Q9ULW3 272 aaKnown RBP2.05□□□□□ -2.08
RNU1-42P-201ENST00000364033 SCAF8Q9UPN6 1271 aaKnown RBP2.05□□□□□ -2.08
RNU1-42P-201ENST00000364033 NIP7Q9Y221 180 aaKnown RBP eCLIP2.05□□□□□ -2.08
RNU1-42P-201ENST00000364033 CLSPNQ9HAW4 1339 aa2.05□□□□□ -2.08
RNU1-42P-201ENST00000364033 ADCY9O60503 1353 aa2.05□□□□□ -2.08
RNU1-42P-201ENST00000364033 CICQ96RK0 1608 aaPredicted RBP2.05□□□□□ -2.08
RNU1-42P-201ENST00000364033 C4BP0C0L5 1744 aa2.05□□□□□ -2.08
RNU1-42P-201ENST00000364033 MON2Q7Z3U7 1717 aa2.05□□□□□ -2.08
RNU1-42P-201ENST00000364033 DOT1LQ8TEK3 1739 aa2.05□□□□□ -2.08
RNU1-42P-201ENST00000364033 SHTN1A0MZ66 631 aa2.04□□□□□ -2.08
RNU1-42P-201ENST00000364033 ELL2O00472 640 aaPredicted RBP2.04□□□□□ -2.08
RNU1-42P-201ENST00000364033 RIMBP2O15034 1052 aa2.04□□□□□ -2.08
RNU1-42P-201ENST00000364033 AOC2O75106 756 aa2.04□□□□□ -2.08
RNU1-42P-201ENST00000364033 RAD17O75943 681 aa2.04□□□□□ -2.08
RNU1-42P-201ENST00000364033 ITGBL1O95965 494 aaPredicted RBP2.04□□□□□ -2.08
RNU1-42P-201ENST00000364033 SNRPA1P09661 255 aaKnown RBP2.04□□□□□ -2.08
RNU1-42P-201ENST00000364033 HCLS1P14317 486 aaPredicted RBP2.04□□□□□ -2.08
RNU1-42P-201ENST00000364033 PPP2R1AP30153 589 aa2.04□□□□□ -2.08
RNU1-42P-201ENST00000364033 EPHX2P34913 555 aa2.04□□□□□ -2.08
RNU1-42P-201ENST00000364033 KDRP35968 1356 aa2.04□□□□□ -2.08
RNU1-42P-201ENST00000364033 COL15A1P39059 1388 aa2.04□□□□□ -2.08
RNU1-42P-201ENST00000364033 IL6STP40189 918 aaPredicted RBP2.04□□□□□ -2.08
RNU1-42P-201ENST00000364033 ST5P78524 1137 aa2.04□□□□□ -2.08
RNU1-42P-201ENST00000364033 TAF7Q15545 349 aaPredicted RBP2.04□□□□□ -2.08
RNU1-42P-201ENST00000364033 AOC3Q16853 763 aa2.04□□□□□ -2.08
RNU1-42P-201ENST00000364033 DOK7Q18PE1 504 aa2.04□□□□□ -2.08
RNU1-42P-201ENST00000364033 KRT24Q2M2I5 525 aa2.04□□□□□ -2.08
RNU1-42P-201ENST00000364033 KIF24Q5T7B8 1368 aa2.04□□□□□ -2.08
RNU1-42P-201ENST00000364033 RNF123Q5XPI4 1314 aa2.04□□□□□ -2.08
RNU1-42P-201ENST00000364033 STYK1Q6J9G0 422 aa2.04□□□□□ -2.08
RNU1-42P-201ENST00000364033 CYP4F22Q6NT55 531 aa2.04□□□□□ -2.08
RNU1-42P-201ENST00000364033 C10orf71Q711Q0 1435 aa2.04□□□□□ -2.08
RNU1-42P-201ENST00000364033 PKD1L2Q7Z442 2459 aa2.04□□□□□ -2.08
RNU1-42P-201ENST00000364033 N4BP2Q86UW6 1770 aaPredicted RBP2.04□□□□□ -2.08
RNU1-42P-201ENST00000364033 CCDC146Q8IYE0 955 aa2.04□□□□□ -2.08
RNU1-42P-201ENST00000364033 VSIG10Q8N0Z9 540 aa2.04□□□□□ -2.08
RNU1-42P-201ENST00000364033 LARGE2Q8N3Y3 721 aa2.04□□□□□ -2.08
RNU1-42P-201ENST00000364033 JMYQ8N9B5 988 aa2.04□□□□□ -2.08
RNU1-42P-201ENST00000364033 GAS2L2Q8NHY3 880 aa2.04□□□□□ -2.08
RNU1-42P-201ENST00000364033 C7orf43Q8WVR3 580 aa2.04□□□□□ -2.08
RNU1-42P-201ENST00000364033 CNKSR1Q969H4 720 aa2.04□□□□□ -2.08
RNU1-42P-201ENST00000364033 YTHDC1Q96MU7 727 aaKnown RBP2.04□□□□□ -2.08
RNU1-42P-201ENST00000364033 GPR101Q96P66 508 aaPredicted RBP2.04□□□□□ -2.08
RNU1-42P-201ENST00000364033 CCDC85AQ96PX6 553 aaPredicted RBP2.04□□□□□ -2.08
RNU1-42P-201ENST00000364033 TUBGCP6Q96RT7 1819 aa2.04□□□□□ -2.08
RNU1-42P-201ENST00000364033 TEX13AQ9BXU3 409 aaPredicted RBP2.04□□□□□ -2.08
RNU1-42P-201ENST00000364033 ZNF541Q9H0D2 1346 aa2.04□□□□□ -2.08
RNU1-42P-201ENST00000364033 RSPH6AQ9H0K4 717 aa2.04□□□□□ -2.08
RNU1-42P-201ENST00000364033 TAF1DQ9H5J8 278 aaPredicted RBP2.04□□□□□ -2.08
RNU1-42P-201ENST00000364033 KCNQ5Q9NR82 932 aa2.04□□□□□ -2.08
RNU1-42P-201ENST00000364033 FAM208AQ9UK61 1670 aaKnown RBP2.04□□□□□ -2.08
RNU1-42P-201ENST00000364033 NUDCQ9Y266 331 aa2.04□□□□□ -2.08
RNU1-42P-201ENST00000364033 ZBTB12Q9Y330 459 aaPredicted RBP2.04□□□□□ -2.08
RNU1-42P-201ENST00000364033 MAP2P11137 1827 aaKnown RBP2.03□□□□□ -2.08
RNU1-42P-201ENST00000364033 WNK3Q9BYP7 1800 aa2.03□□□□□ -2.08
RNU1-42P-201ENST00000364033 HEG1Q9ULI3 1381 aa2.03□□□□□ -2.08
RNU1-42P-201ENST00000364033 WDR33Q9C0J8 1336 aaKnown RBP2.03□□□□□ -2.08
RNU1-42P-201ENST00000364033 UNC79Q9P2D8 2635 aa2.03□□□□□ -2.08
RNU1-42P-201ENST00000364033 WTIPA6NIX2 430 aaPredicted RBP2.03□□□□□ -2.08
RNU1-42P-201ENST00000364033 TMEM88BA6NKF7 163 aa2.03□□□□□ -2.08
RNU1-42P-201ENST00000364033 ATP5J2-PTCD1G3V325 749 aa2.03□□□□□ -2.08
RNU1-42P-201ENST00000364033 PPIP5K2O43314 1243 aa2.03□□□□□ -2.08
RNU1-42P-201ENST00000364033 CELF2O95319 508 aaKnown RBP2.03□□□□□ -2.08
RNU1-42P-201ENST00000364033 NPR1P16066 1061 aa2.03□□□□□ -2.08
RNU1-42P-201ENST00000364033 ALDH1B1P30837 517 aa2.03□□□□□ -2.08
RNU1-42P-201ENST00000364033 IARSP41252 1262 aaKnown RBP2.03□□□□□ -2.08
RNU1-42P-201ENST00000364033 HIRAP54198 1017 aaPredicted RBP2.03□□□□□ -2.08
RNU1-42P-201ENST00000364033 EIF6P56537 245 aaKnown RBP2.03□□□□□ -2.08
RNU1-42P-201ENST00000364033 RIPK4P57078 832 aa2.03□□□□□ -2.08
RNU1-42P-201ENST00000364033 EIF4A1P60842 406 aaKnown RBP2.03□□□□□ -2.08
RNU1-42P-201ENST00000364033 FKBP4Q02790 459 aaKnown RBP eCLIP2.03□□□□□ -2.08
RNU1-42P-201ENST00000364033 DDX10Q13206 875 aaKnown RBP2.03□□□□□ -2.08
RNU1-42P-201ENST00000364033 PROSER3Q2NL68 480 aa2.03□□□□□ -2.08
RNU1-42P-201ENST00000364033 TBC1D10BQ4KMP7 808 aaPredicted RBP2.03□□□□□ -2.08
RNU1-42P-201ENST00000364033 CCDC93Q567U6 631 aa2.03□□□□□ -2.08
RNU1-42P-201ENST00000364033 PRAMEF18Q5VWM3 479 aa2.03□□□□□ -2.08
RNU1-42P-201ENST00000364033 CST9Q5W186 159 aa2.03□□□□□ -2.08
RNU1-42P-201ENST00000364033 COPS6Q7L5N1 327 aa2.03□□□□□ -2.08
RNU1-42P-201ENST00000364033 SAMD7Q7Z3H4 446 aa2.03□□□□□ -2.08
RNU1-42P-201ENST00000364033 USP48Q86UV5 1035 aa2.03□□□□□ -2.08
RNU1-42P-201ENST00000364033 JDP2Q8WYK2 163 aa2.03□□□□□ -2.08
RNU1-42P-201ENST00000364033 RPGRQ92834 1020 aaKnown RBP2.03□□□□□ -2.08
RNU1-42P-201ENST00000364033 AIDAQ96BJ3 306 aa2.03□□□□□ -2.08
RNU1-42P-201ENST00000364033 RBM17Q96I25 401 aaKnown RBP2.03□□□□□ -2.08
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms