RNA–Protein interactions for RNA: ENST00000362031.8

SNX6-201, Transcript of sorting nexin 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNX6, Length 2,001 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-201ENST00000362031 TMEM57Q8N5G2 664 aa13.71□□□□□ -0.21
SNX6-201ENST00000362031 AK7Q96M32 723 aa13.71□□□□□ -0.21
SNX6-201ENST00000362031 CHMP4AQ9BY43 222 aa13.71□□□□□ -0.21
SNX6-201ENST00000362031 SRP68Q9UHB9 627 aaKnown RBP13.71□□□□□ -0.21
SNX6-201ENST00000362031 ABCC4O15439 1325 aa13.71□□□□□ -0.21
SNX6-201ENST00000362031 NUP188Q5SRE5 1749 aa13.71□□□□□ -0.21
SNX6-201ENST00000362031 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP13.71□□□□□ -0.22
SNX6-201ENST00000362031 SLC4A10Q6U841 1118 aa13.71□□□□□ -0.22
SNX6-201ENST00000362031 DZIP3Q86Y13 1208 aaKnown RBP13.71□□□□□ -0.22
SNX6-201ENST00000362031 TUBGCP6Q96RT7 1819 aa13.7□□□□□ -0.22
SNX6-201ENST00000362031 IPO8O15397 1037 aaKnown RBP13.7□□□□□ -0.22
SNX6-201ENST00000362031 CAMTA2O94983 1202 aa13.7□□□□□ -0.22
SNX6-201ENST00000362031 DZIP1LQ8IYY4 767 aaKnown RBP13.7□□□□□ -0.22
SNX6-201ENST00000362031 PDGFDQ9GZP0 370 aaPredicted RBP13.7□□□□□ -0.22
SNX6-201ENST00000362031 BCL2L12Q9HB09 334 aa13.7□□□□□ -0.22
SNX6-201ENST00000362031 COG6Q9Y2V7 657 aa13.7□□□□□ -0.22
SNX6-201ENST00000362031 RTCBQ9Y3I0 505 aaKnown RBP13.7□□□□□ -0.22
SNX6-201ENST00000362031 DNAAF4Q8WXU2 420 aa13.69□□□□□ -0.22
SNX6-201ENST00000362031 IGKV5-2P06315 115 aa13.69□□□□□ -0.22
SNX6-201ENST00000362031 CWF19L2Q2TBE0 894 aaKnown RBP13.69□□□□□ -0.22
SNX6-201ENST00000362031 RIC3Q7Z5B4 369 aa13.69□□□□□ -0.22
SNX6-201ENST00000362031 PLBD2Q8NHP8 589 aa13.69□□□□□ -0.22
SNX6-201ENST00000362031 CRBNQ96SW2 442 aa13.69□□□□□ -0.22
SNX6-201ENST00000362031 API5Q9BZZ5 524 aaKnown RBP13.69□□□□□ -0.22
SNX6-201ENST00000362031 TFCP2L1Q9NZI6 479 aa13.69□□□□□ -0.22
SNX6-201ENST00000362031 GOLGB1Q14789 3259 aaKnown RBP13.69□□□□□ -0.22
SNX6-201ENST00000362031 MAP3K15Q6ZN16 1313 aa13.69□□□□□ -0.22
SNX6-201ENST00000362031 ATP5J2-PTCD1G3V325 749 aa13.68□□□□□ -0.22
SNX6-201ENST00000362031 BEND3Q5T5X7 828 aa13.68□□□□□ -0.22
SNX6-201ENST00000362031 ARFGEF2Q9Y6D5 1785 aa13.68□□□□□ -0.22
SNX6-201ENST00000362031 C4AP0C0L4 1744 aa13.68□□□□□ -0.22
SNX6-201ENST00000362031 PDE3AQ14432 1141 aa13.68□□□□□ -0.22
SNX6-201ENST00000362031 SLC15A2Q16348 729 aa13.68□□□□□ -0.22
SNX6-201ENST00000362031 TRAPPC3LQ5T215 181 aa13.68□□□□□ -0.22
SNX6-201ENST00000362031 USPL1Q5W0Q7 1092 aa13.68□□□□□ -0.22
SNX6-201ENST00000362031 COL23A1Q86Y22 540 aaPredicted RBP13.68□□□□□ -0.22
SNX6-201ENST00000362031 FTSJ3Q8IY81 847 aaKnown RBP13.68□□□□□ -0.22
SNX6-201ENST00000362031 GOLGA6L2Q8N9W4 650 aaPredicted RBP13.68□□□□□ -0.22
SNX6-201ENST00000362031 EXOC6Q8TAG9 804 aa13.68□□□□□ -0.22
SNX6-201ENST00000362031 MYD88Q99836 296 aa13.68□□□□□ -0.22
SNX6-201ENST00000362031 PNPLA7Q6ZV29 1317 aa13.67□□□□□ -0.22
SNX6-201ENST00000362031 METTL22Q9BUU2 404 aaPredicted RBP13.67□□□□□ -0.22
SNX6-201ENST00000362031 INTS3Q68E01 1043 aaKnown RBP13.66□□□□□ -0.22
SNX6-201ENST00000362031 KIF6Q6ZMV9 814 aa13.66□□□□□ -0.22
SNX6-201ENST00000362031 NUP98P52948 1817 aa13.66□□□□□ -0.22
SNX6-201ENST00000362031 DDX58O95786 925 aaKnown RBP13.66□□□□□ -0.22
SNX6-201ENST00000362031 GPTP24298 496 aa13.66□□□□□ -0.22
SNX6-201ENST00000362031 SSFA2P28290 1259 aa13.66□□□□□ -0.22
SNX6-201ENST00000362031 GIGYF2Q6Y7W6 1299 aaKnown RBP13.66□□□□□ -0.22
SNX6-201ENST00000362031 ITPRIPQ8IWB1 547 aa13.66□□□□□ -0.22
SNX6-201ENST00000362031 JARID2Q92833 1246 aaPredicted RBP13.66□□□□□ -0.22
SNX6-201ENST00000362031 NARFQ9UHQ1 456 aa13.66□□□□□ -0.22
SNX6-201ENST00000362031 FKBP8Q14318 412 aa13.65□□□□□ -0.22
SNX6-201ENST00000362031 MVPQ14764 893 aaKnown RBP13.65□□□□□ -0.22
SNX6-201ENST00000362031 USP42Q9H9J4 1324 aaKnown RBP13.65□□□□□ -0.22
SNX6-201ENST00000362031 UBN2Q6ZU65 1347 aa13.64□□□□□ -0.23
SNX6-201ENST00000362031 ERVV-1B6SEH8 477 aa13.64□□□□□ -0.23
SNX6-201ENST00000362031 RFC4P35249 363 aa13.64□□□□□ -0.23
SNX6-201ENST00000362031 TCIRG1Q13488 830 aa13.64□□□□□ -0.23
SNX6-201ENST00000362031 BCORQ6W2J9 1755 aa13.64□□□□□ -0.23
SNX6-201ENST00000362031 NEURL1BA8MQ27 555 aa13.64□□□□□ -0.23
SNX6-201ENST00000362031 GYS1P13807 737 aa13.64□□□□□ -0.23
SNX6-201ENST00000362031 TBC1D9BQ66K14 1250 aa13.64□□□□□ -0.23
SNX6-201ENST00000362031 NPM2Q86SE8 214 aaKnown RBP13.64□□□□□ -0.23
SNX6-201ENST00000362031 MEIS3Q99687 375 aa13.64□□□□□ -0.23
SNX6-201ENST00000362031 ISCA1Q9BUE6 129 aa13.64□□□□□ -0.23
SNX6-201ENST00000362031 STK32BQ9NY57 414 aa13.64□□□□□ -0.23
SNX6-201ENST00000362031 ATP10DQ9P241 1426 aa13.63□□□□□ -0.23
SNX6-201ENST00000362031 A0A087WZG4 1122 aa13.63□□□□□ -0.23
SNX6-201ENST00000362031 ZBTB7BO15156 539 aaPredicted RBP13.63□□□□□ -0.23
SNX6-201ENST00000362031 ADRA2BP18089 450 aa13.63□□□□□ -0.23
SNX6-201ENST00000362031 ZNF34Q8IZ26 560 aa13.63□□□□□ -0.23
SNX6-201ENST00000362031 SYNE4Q8N205 404 aa13.63□□□□□ -0.23
SNX6-201ENST00000362031 LINS1Q8NG48 757 aa13.63□□□□□ -0.23
SNX6-201ENST00000362031 SRCIN1Q9C0H9 1055 aa13.63□□□□□ -0.23
SNX6-201ENST00000362031 USP44Q9H0E7 712 aa13.63□□□□□ -0.23
SNX6-201ENST00000362031 SCN7AQ01118 1682 aa13.63□□□□□ -0.23
SNX6-201ENST00000362031 ZPR1O75312 459 aa13.63□□□□□ -0.23
SNX6-201ENST00000362031 NBPF7P0C2Y1 421 aaPredicted RBP13.63□□□□□ -0.23
SNX6-201ENST00000362031 BICDL1Q6ZP65 573 aa13.63□□□□□ -0.23
SNX6-201ENST00000362031 PXDNLA1KZ92 1463 aa13.62□□□□□ -0.23
SNX6-201ENST00000362031 MSH5O43196 834 aa13.62□□□□□ -0.23
SNX6-201ENST00000362031 CCT4P50991 539 aaKnown RBP13.62□□□□□ -0.23
SNX6-201ENST00000362031 RTL5Q5HYW3 569 aaPredicted RBP13.62□□□□□ -0.23
SNX6-201ENST00000362031 C1orf115Q9H7X2 142 aa13.62□□□□□ -0.23
SNX6-201ENST00000362031 GCKRQ14397 625 aa13.61□□□□□ -0.23
SNX6-201ENST00000362031 NLRP10Q86W26 655 aa13.61□□□□□ -0.23
SNX6-201ENST00000362031 N4BP2Q86UW6 1770 aaPredicted RBP13.61□□□□□ -0.23
SNX6-201ENST00000362031 FAM177BA6PVY3 158 aa13.61□□□□□ -0.23
SNX6-201ENST00000362031 SUSD4Q5VX71 490 aa13.61□□□□□ -0.23
SNX6-201ENST00000362031 MSL1Q68DK7 614 aa13.61□□□□□ -0.23
SNX6-201ENST00000362031 NIP7Q9Y221 180 aaKnown RBP eCLIP13.61□□□□□ -0.23
SNX6-201ENST00000362031 NEXNQ0ZGT2 675 aa13.6□□□□□ -0.23
SNX6-201ENST00000362031 NFIXQ14938 502 aa13.6□□□□□ -0.23
SNX6-201ENST00000362031 R3HDM1Q15032 1099 aaKnown RBP13.6□□□□□ -0.23
SNX6-201ENST00000362031 CLEC4GQ6UXB4 293 aa13.6□□□□□ -0.23
SNX6-201ENST00000362031 ZBTB40Q9NUA8 1239 aa13.6□□□□□ -0.23
SNX6-201ENST00000362031 AFDNP55196 1824 aaKnown RBP13.6□□□□□ -0.23
SNX6-201ENST00000362031 PSDA5PKW4 1024 aaPredicted RBP13.59□□□□□ -0.23
SNX6-201ENST00000362031 ALDH1L1O75891 902 aa13.59□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms