RNA–Protein interactions for RNA: ENST00000361796.9

CTNND1-204, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 6,226 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-204ENST00000361796 NECAB1Q8N987 351 aa9.33□□□□□ -0.92
CTNND1-204ENST00000361796 KIF18AQ8NI77 898 aa9.33□□□□□ -0.92
CTNND1-204ENST00000361796 DNAAF4Q8WXU2 420 aa9.33□□□□□ -0.92
CTNND1-204ENST00000361796 RNF216Q9NWF9 866 aaPredicted RBP9.33□□□□□ -0.92
CTNND1-204ENST00000361796 SHTN1A0MZ66 631 aa9.33□□□□□ -0.92
CTNND1-204ENST00000361796 TERF1P54274 439 aa9.33□□□□□ -0.92
CTNND1-204ENST00000361796 TIAM1Q13009 1591 aa9.33□□□□□ -0.92
CTNND1-204ENST00000361796 TMOD2Q9NZR1 351 aa9.33□□□□□ -0.92
CTNND1-204ENST00000361796 A0A087WZG4 1122 aa9.33□□□□□ -0.92
CTNND1-204ENST00000361796 BIN2Q9UBW5 565 aaPredicted RBP9.33□□□□□ -0.92
CTNND1-204ENST00000361796 LIMCH1Q9UPQ0 1083 aa9.33□□□□□ -0.92
CTNND1-204ENST00000361796 SLC5A1P13866 664 aa9.33□□□□□ -0.92
CTNND1-204ENST00000361796 MAP3K12Q12852 859 aa9.33□□□□□ -0.92
CTNND1-204ENST00000361796 TMCO5BA8MYB1 307 aa9.33□□□□□ -0.92
CTNND1-204ENST00000361796 DESP17661 470 aa9.33□□□□□ -0.92
CTNND1-204ENST00000361796 GTF2F1P35269 517 aaKnown RBP eCLIP9.33□□□□□ -0.925e-6■■■□□ 17.8
CTNND1-204ENST00000361796 MTIF2P46199 727 aaKnown RBP9.33□□□□□ -0.92
CTNND1-204ENST00000361796 PPP4R3BQ5MIZ7 849 aa9.33□□□□□ -0.92
CTNND1-204ENST00000361796 RRP9O43818 475 aaKnown RBP9.32□□□□□ -0.92
CTNND1-204ENST00000361796 TCERG1LQ5VWI1 586 aa9.32□□□□□ -0.92
CTNND1-204ENST00000361796 GIMAP6Q6P9H5 292 aa9.32□□□□□ -0.92
CTNND1-204ENST00000361796 TNIP1Q15025 636 aa9.32□□□□□ -0.92
CTNND1-204ENST00000361796 TCEANC2Q96MN5 208 aa9.32□□□□□ -0.92
CTNND1-204ENST00000361796 ARHGEF11O15085 1522 aa9.32□□□□□ -0.92
CTNND1-204ENST00000361796 CCDC194A0A1B0GVG4 234 aa9.32□□□□□ -0.92
CTNND1-204ENST00000361796 POTEJP0CG39 1038 aa9.32□□□□□ -0.92
CTNND1-204ENST00000361796 SLC26A6Q9BXS9 759 aa9.32□□□□□ -0.92
CTNND1-204ENST00000361796 ZHX1Q9UKY1 873 aaPredicted RBP9.32□□□□□ -0.92
CTNND1-204ENST00000361796 SNAPC4Q5SXM2 1469 aa9.32□□□□□ -0.92
CTNND1-204ENST00000361796 TMEM67Q5HYA8 995 aa9.32□□□□□ -0.92
CTNND1-204ENST00000361796 SCAND2PQ9GZW5 306 aaPredicted RBP9.32□□□□□ -0.92
CTNND1-204ENST00000361796 HLTFQ14527 1009 aaKnown RBP eCLIP9.32□□□□□ -0.925e-6■□□□□ 9.8
CTNND1-204ENST00000361796 SERPINA10Q9UK55 444 aa9.32□□□□□ -0.92
CTNND1-204ENST00000361796 USP16Q9Y5T5 823 aa9.32□□□□□ -0.92
CTNND1-204ENST00000361796 RBM25P49756 843 aaKnown RBP9.31□□□□□ -0.92
CTNND1-204ENST00000361796 SH2B1Q9NRF2 756 aaPredicted RBP9.31□□□□□ -0.92
CTNND1-204ENST00000361796 SLC52A1Q9NWF4 448 aa9.31□□□□□ -0.92
CTNND1-204ENST00000361796 CCDC61Q9Y6R9 512 aa9.31□□□□□ -0.92
CTNND1-204ENST00000361796 ANKRD18BA2A2Z9 1011 aa9.31□□□□□ -0.92
CTNND1-204ENST00000361796 STX6O43752 255 aa9.31□□□□□ -0.92
CTNND1-204ENST00000361796 IDEP14735 1019 aa9.31□□□□□ -0.92
CTNND1-204ENST00000361796 FAM107BQ9H098 131 aa9.31□□□□□ -0.92
CTNND1-204ENST00000361796 ZNF652Q9Y2D9 606 aa9.31□□□□□ -0.92
CTNND1-204ENST00000361796 FOXO3O43524 673 aa9.31□□□□□ -0.92
CTNND1-204ENST00000361796 FLIIQ13045 1269 aa9.31□□□□□ -0.92
CTNND1-204ENST00000361796 ALDH1L2Q3SY69 923 aa9.31□□□□□ -0.92
CTNND1-204ENST00000361796 IQCA1Q86XH1 822 aa9.31□□□□□ -0.92
CTNND1-204ENST00000361796 RPGRQ92834 1020 aaKnown RBP9.31□□□□□ -0.92
CTNND1-204ENST00000361796 MYO1BO43795 1136 aa9.31□□□□□ -0.92
CTNND1-204ENST00000361796 ATP2C2O75185 946 aa9.31□□□□□ -0.92
CTNND1-204ENST00000361796 TMEM266Q2M3C6 531 aa9.31□□□□□ -0.92
CTNND1-204ENST00000361796 CCDC91Q7Z6B0 441 aa9.31□□□□□ -0.92
CTNND1-204ENST00000361796 CATIPQ7Z7H3 387 aa9.31□□□□□ -0.92
CTNND1-204ENST00000361796 CGNQ9P2M7 1197 aaKnown RBP9.3□□□□□ -0.92
CTNND1-204ENST00000361796 PUF60Q9UHX1 559 aaKnown RBP9.3□□□□□ -0.92
CTNND1-204ENST00000361796 IQSEC3Q9UPP2 1182 aaPredicted RBP9.3□□□□□ -0.92
CTNND1-204ENST00000361796 YEATS4O95619 227 aa9.3□□□□□ -0.92
CTNND1-204ENST00000361796 ZSCAN23Q3MJ62 389 aa9.3□□□□□ -0.92
CTNND1-204ENST00000361796 CCDC40Q4G0X9 1142 aa9.3□□□□□ -0.92
CTNND1-204ENST00000361796 CUL5Q93034 780 aa9.3□□□□□ -0.92
CTNND1-204ENST00000361796 MBIPQ9NS73 344 aa9.3□□□□□ -0.92
CTNND1-204ENST00000361796 CNPY2Q9Y2B0 182 aa9.3□□□□□ -0.92
CTNND1-204ENST00000361796 NAIPQ13075 1403 aa9.3□□□□□ -0.92
CTNND1-204ENST00000361796 STX1AQ16623 288 aa9.3□□□□□ -0.92
CTNND1-204ENST00000361796 ADGRF5Q8IZF2 1346 aa9.3□□□□□ -0.92
CTNND1-204ENST00000361796 TROQ12816 1431 aaPredicted RBP9.3□□□□□ -0.92
CTNND1-204ENST00000361796 AFMP43652 599 aa9.3□□□□□ -0.92
CTNND1-204ENST00000361796 NOP2P46087 812 aaKnown RBP9.3□□□□□ -0.92
CTNND1-204ENST00000361796 FBXO31Q5XUX0 539 aaPredicted RBP9.3□□□□□ -0.92
CTNND1-204ENST00000361796 PPP4R3AQ6IN85 833 aa9.3□□□□□ -0.92
CTNND1-204ENST00000361796 EP400NLQ6ZTU2 488 aa9.3□□□□□ -0.92
CTNND1-204ENST00000361796 DDX46Q7L014 1031 aaKnown RBP9.3□□□□□ -0.92
CTNND1-204ENST00000361796 MAATS1Q7Z4T9 603 aa9.3□□□□□ -0.92
CTNND1-204ENST00000361796 KCNH5Q8NCM2 988 aa9.3□□□□□ -0.92
CTNND1-204ENST00000361796 GIMAP7Q8NHV1 300 aa9.3□□□□□ -0.92
CTNND1-204ENST00000361796 DRC1Q96MC2 740 aa9.3□□□□□ -0.92
CTNND1-204ENST00000361796 CTNNA2P26232 953 aa9.29□□□□□ -0.92
CTNND1-204ENST00000361796 METAP2P50579 478 aaKnown RBP eCLIP9.29□□□□□ -0.92
CTNND1-204ENST00000361796 ZNF287Q9HBT7 754 aa9.29□□□□□ -0.92
CTNND1-204ENST00000361796 JADE2Q9NQC1 790 aa9.29□□□□□ -0.92
CTNND1-204ENST00000361796 C6orf229H3BNL8 230 aa9.29□□□□□ -0.92
CTNND1-204ENST00000361796 BAG4O95429 457 aaKnown RBP9.29□□□□□ -0.92
CTNND1-204ENST00000361796 SNW1Q13573 536 aaKnown RBP9.29□□□□□ -0.92
CTNND1-204ENST00000361796 PPP1R42Q7Z4L9 355 aa9.29□□□□□ -0.92
CTNND1-204ENST00000361796 EVI5LQ96CN4 794 aa9.29□□□□□ -0.92
CTNND1-204ENST00000361796 HCLS1P14317 486 aaPredicted RBP9.29□□□□□ -0.92
CTNND1-204ENST00000361796 CTR9Q6PD62 1173 aa9.29□□□□□ -0.92
CTNND1-204ENST00000361796 UBE3BQ7Z3V4 1068 aa9.29□□□□□ -0.92
CTNND1-204ENST00000361796 GBP3Q9H0R5 595 aa9.29□□□□□ -0.92
CTNND1-204ENST00000361796 SAMM50Q9Y512 469 aa9.29□□□□□ -0.92
CTNND1-204ENST00000361796 LRPPRCP42704 1394 aaKnown RBP9.29□□□□□ -0.92
CTNND1-204ENST00000361796 CCDC196A0A1B0GTZ2 297 aa9.29□□□□□ -0.92
CTNND1-204ENST00000361796 MAP9Q49MG5 647 aa9.29□□□□□ -0.92
CTNND1-204ENST00000361796 TSPY2A6NKD2 308 aa9.29□□□□□ -0.92
CTNND1-204ENST00000361796 PRC1O43663 620 aa9.29□□□□□ -0.92
CTNND1-204ENST00000361796 HMGB1P09429 215 aaKnown RBP9.29□□□□□ -0.92
CTNND1-204ENST00000361796 ZMYND15Q9H091 742 aa9.29□□□□□ -0.92
CTNND1-204ENST00000361796 USO1O60763 962 aaKnown RBP9.28□□□□□ -0.92
CTNND1-204ENST00000361796 CEBPAP49715 358 aaPredicted RBP9.28□□□□□ -0.92
CTNND1-204ENST00000361796 SPECC1Q5M775 1068 aa9.28□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 63 ms