RNA–Protein interactions for RNA: ENST00000361716.7

VAMP1-201, Transcript of vesicle associated membrane protein 1, humanhuman

TSL 1 (best) BASIC

Gene VAMP1, Length 3,449 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP1-201ENST00000361716 SKIDA1Q1XH10 827 aa15.04■□□□□ -0
VAMP1-201ENST00000361716 IQSEC2Q5JU85 1478 aa15.03■□□□□ -0
VAMP1-201ENST00000361716 A0A087WWV3 80 aa15.03■□□□□ -0
VAMP1-201ENST00000361716 BECN2A8MW95 431 aa15.03■□□□□ -0
VAMP1-201ENST00000361716 GJB2P29033 226 aa15.03■□□□□ -0
VAMP1-201ENST00000361716 USHBP1Q8N6Y0 703 aa15.03■□□□□ -0
VAMP1-201ENST00000361716 CACTINQ8WUQ7 758 aaKnown RBP15.03■□□□□ -0
VAMP1-201ENST00000361716 DACT1Q9NYF0 836 aa15.03■□□□□ -0
VAMP1-201ENST00000361716 TMEM131LA2VDJ0 1609 aa15.03■□□□□ -0
VAMP1-201ENST00000361716 CASTP20810 708 aaKnown RBP15.03■□□□□ -0
VAMP1-201ENST00000361716 HOMER1Q86YM7 354 aa15.03■□□□□ -0
VAMP1-201ENST00000361716 PAXBP1Q9Y5B6 917 aa15.03■□□□□ -0
VAMP1-201ENST00000361716 EIF4A2Q14240 407 aaKnown RBP15.02■□□□□ -0
VAMP1-201ENST00000361716 SRGAP3O43295 1099 aa15.02■□□□□ -0
VAMP1-201ENST00000361716 LIG1P18858 919 aa15.02■□□□□ -0
VAMP1-201ENST00000361716 ZNF165P49910 485 aa15.02■□□□□ -0
VAMP1-201ENST00000361716 GNL2Q13823 731 aaKnown RBP15.02■□□□□ -0
VAMP1-201ENST00000361716 ERCC6LQ2NKX8 1250 aa15.02■□□□□ -0
VAMP1-201ENST00000361716 FAM177A1Q8N128 213 aaPredicted RBP15.02■□□□□ -0
VAMP1-201ENST00000361716 CBX8Q9HC52 389 aa15.02■□□□□ -0
VAMP1-201ENST00000361716 ZSCAN21Q9Y5A6 473 aaPredicted RBP15.02■□□□□ -0
VAMP1-201ENST00000361716 CAPN2P17655 700 aa15.02□□□□□ -0.01
VAMP1-201ENST00000361716 AK2P54819 239 aa15.02□□□□□ -0.01
VAMP1-201ENST00000361716 SBNO2Q9Y2G9 1366 aa15.02□□□□□ -0.01
VAMP1-201ENST00000361716 HTATSF1O43719 755 aaKnown RBP15.01□□□□□ -0.01
VAMP1-201ENST00000361716 SKILP12757 684 aa15.01□□□□□ -0.01
VAMP1-201ENST00000361716 CUL4AQ13619 759 aa15.01□□□□□ -0.01
VAMP1-201ENST00000361716 CCAR2Q8N163 923 aaKnown RBP15.01□□□□□ -0.01
VAMP1-201ENST00000361716 INTS4Q96HW7 963 aaKnown RBP15.01□□□□□ -0.01
VAMP1-201ENST00000361716 TOMM22Q9NS69 142 aa15.01□□□□□ -0.01
VAMP1-201ENST00000361716 ARHGEF40Q8TER5 1519 aa15.01□□□□□ -0.01
VAMP1-201ENST00000361716 USP16Q9Y5T5 823 aa15.01□□□□□ -0.01
VAMP1-201ENST00000361716 MORC2Q9Y6X9 1032 aaPredicted RBP15.01□□□□□ -0.01
VAMP1-201ENST00000361716 JAKMIP1Q96N16 626 aaKnown RBP15.01□□□□□ -0.01
VAMP1-201ENST00000361716 FMNL2Q96PY5 1086 aa15.01□□□□□ -0.01
VAMP1-201ENST00000361716 RSPH14Q9UHP6 348 aa15.01□□□□□ -0.01
VAMP1-201ENST00000361716 TNRQ92752 1358 aa15.01□□□□□ -0.01
VAMP1-201ENST00000361716 LARP1BQ659C4 914 aaKnown RBP15□□□□□ -0.01
VAMP1-201ENST00000361716 CHMLP26374 656 aa15□□□□□ -0.01
VAMP1-201ENST00000361716 PRPF40BQ6NWY9 871 aaKnown RBP15□□□□□ -0.01
VAMP1-201ENST00000361716 FLIIQ13045 1269 aa14.99□□□□□ -0.01
VAMP1-201ENST00000361716 TEX35Q5T0J7 233 aa14.99□□□□□ -0.01
VAMP1-201ENST00000361716 CCDC61Q9Y6R9 512 aa14.99□□□□□ -0.01
VAMP1-201ENST00000361716 AIMP1Q12904 312 aaKnown RBP14.99□□□□□ -0.01
VAMP1-201ENST00000361716 CCDC144BQ3MJ40 725 aa14.99□□□□□ -0.01
VAMP1-201ENST00000361716 CCDC144CPQ8IYA2 1237 aa14.99□□□□□ -0.01
VAMP1-201ENST00000361716 SIL1Q9H173 461 aa14.99□□□□□ -0.01
VAMP1-201ENST00000361716 RIMS2Q9UQ26 1411 aa14.98□□□□□ -0.01
VAMP1-201ENST00000361716 WASLO00401 505 aaPredicted RBP14.98□□□□□ -0.01
VAMP1-201ENST00000361716 CCT4P50991 539 aaKnown RBP14.98□□□□□ -0.01
VAMP1-201ENST00000361716 ZNF75DP51815 510 aa14.98□□□□□ -0.01
VAMP1-201ENST00000361716 HDGFL1Q5TGJ6 251 aa14.98□□□□□ -0.01
VAMP1-201ENST00000361716 KRBA2Q6ZNG9 492 aa14.98□□□□□ -0.01
VAMP1-201ENST00000361716 CCDC34Q96HJ3 373 aa14.98□□□□□ -0.01
VAMP1-201ENST00000361716 RTL1A6NKG5 1358 aa14.98□□□□□ -0.01
VAMP1-201ENST00000361716 HSP90B1P14625 803 aaKnown RBP14.98□□□□□ -0.01
VAMP1-201ENST00000361716 KRT85P78386 507 aa14.98□□□□□ -0.01
VAMP1-201ENST00000361716 ERCC4Q92889 916 aaPredicted RBP14.98□□□□□ -0.01
VAMP1-201ENST00000361716 MRVI1Q9Y6F6 885 aa14.98□□□□□ -0.01
VAMP1-201ENST00000361716 METP08581 1390 aa14.97□□□□□ -0.01
VAMP1-201ENST00000361716 LARGE1O95461 756 aa14.97□□□□□ -0.01
VAMP1-201ENST00000361716 GNAI3P08754 354 aa14.97□□□□□ -0.01
VAMP1-201ENST00000361716 MTHFSDQ2M296 383 aaKnown RBP14.97□□□□□ -0.01
VAMP1-201ENST00000361716 ZCCHC17Q9NP64 241 aaKnown RBP14.97□□□□□ -0.01
VAMP1-201ENST00000361716 LIMCH1Q9UPQ0 1083 aa14.97□□□□□ -0.01
VAMP1-201ENST00000361716 BMS1Q14692 1282 aaKnown RBP14.97□□□□□ -0.01
VAMP1-201ENST00000361716 ARHGAP29Q52LW3 1261 aa14.97□□□□□ -0.01
VAMP1-201ENST00000361716 PPP1R42Q7Z4L9 355 aa14.97□□□□□ -0.01
VAMP1-201ENST00000361716 SPATA32Q96LK8 384 aa14.97□□□□□ -0.01
VAMP1-201ENST00000361716 IL25Q9H293 177 aa14.97□□□□□ -0.01
VAMP1-201ENST00000361716 SLU7O95391 586 aaKnown RBP14.97□□□□□ -0.01
VAMP1-201ENST00000361716 HSPA2P54652 639 aa14.97□□□□□ -0.01
VAMP1-201ENST00000361716 RBM6P78332 1123 aaKnown RBP14.97□□□□□ -0.01
VAMP1-201ENST00000361716 PHAXQ9H814 394 aaKnown RBP14.97□□□□□ -0.01
VAMP1-201ENST00000361716 EID1Q9Y6B2 187 aa14.97□□□□□ -0.01
VAMP1-201ENST00000361716 RAD51AP2Q09MP3 1159 aa14.96□□□□□ -0.01
VAMP1-201ENST00000361716 SYT10Q6XYQ8 523 aa14.96□□□□□ -0.01
VAMP1-201ENST00000361716 C9orf78Q9NZ63 289 aaPredicted RBP14.96□□□□□ -0.01
VAMP1-201ENST00000361716 GYS2P54840 703 aa14.96□□□□□ -0.01
VAMP1-201ENST00000361716 MNS1Q8NEH6 495 aa14.96□□□□□ -0.01
VAMP1-201ENST00000361716 ARHGEF28Q8N1W1 1705 aaKnown RBP14.96□□□□□ -0.02
VAMP1-201ENST00000361716 NLRP6P59044 892 aa14.95□□□□□ -0.02
VAMP1-201ENST00000361716 SPATA31D1Q6ZQQ2 1576 aa14.95□□□□□ -0.02
VAMP1-201ENST00000361716 YTHDC2Q9H6S0 1430 aaKnown RBP14.95□□□□□ -0.02
VAMP1-201ENST00000361716 CCDC69A6NI79 296 aa14.95□□□□□ -0.02
VAMP1-201ENST00000361716 ZRSR1Q15695 479 aaKnown RBP14.95□□□□□ -0.02
VAMP1-201ENST00000361716 TTC6Q86TZ1 520 aa14.95□□□□□ -0.02
VAMP1-201ENST00000361716 DDX11Q96FC9 970 aa14.95□□□□□ -0.02
VAMP1-201ENST00000361716 ZFYVE9O95405 1425 aa14.95□□□□□ -0.02
VAMP1-201ENST00000361716 TRIM66O15016 1216 aa14.95□□□□□ -0.02
VAMP1-201ENST00000361716 RASEFQ8IZ41 740 aa14.95□□□□□ -0.02
VAMP1-201ENST00000361716 GPATCH11Q8N954 259 aa14.95□□□□□ -0.02
VAMP1-201ENST00000361716 CCDC191Q8NCU4 936 aa14.95□□□□□ -0.02
VAMP1-201ENST00000361716 IFIT2P09913 472 aaKnown RBP14.94□□□□□ -0.02
VAMP1-201ENST00000361716 ZNF853P0CG23 659 aa14.94□□□□□ -0.02
VAMP1-201ENST00000361716 CCDC30Q5VVM6 783 aa14.94□□□□□ -0.02
VAMP1-201ENST00000361716 RUFY3Q7L099 469 aa14.94□□□□□ -0.02
VAMP1-201ENST00000361716 TCHHQ07283 1943 aa14.94□□□□□ -0.02
VAMP1-201ENST00000361716 SEC31AO94979 1220 aaKnown RBP14.94□□□□□ -0.02
VAMP1-201ENST00000361716 TAF7Q15545 349 aaPredicted RBP14.94□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms