RNA–Protein interactions for RNA: ENST00000361337.2

TOP1-201, Transcript of DNA topoisomerase I, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TOP1, Length 3,738 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP1-201ENST00000361337 PDE1AP54750 535 aa10.96□□□□□ -0.65
TOP1-201ENST00000361337 SPG7Q9UQ90 795 aa10.96□□□□□ -0.65
TOP1-201ENST00000361337 STRCP1A6NGW2 1772 aa10.96□□□□□ -0.66
TOP1-201ENST00000361337 BRD1O95696 1058 aa10.96□□□□□ -0.66
TOP1-201ENST00000361337 RPAP2Q8IXW5 612 aaPredicted RBP10.96□□□□□ -0.66
TOP1-201ENST00000361337 REC8O95072 547 aa10.95□□□□□ -0.66
TOP1-201ENST00000361337 TERF1P54274 439 aa10.95□□□□□ -0.66
TOP1-201ENST00000361337 TAF7Q15545 349 aaPredicted RBP10.95□□□□□ -0.66
TOP1-201ENST00000361337 CASC1Q6TDU7 716 aa10.95□□□□□ -0.66
TOP1-201ENST00000361337 LARP6Q9BRS8 491 aaKnown RBP10.95□□□□□ -0.66
TOP1-201ENST00000361337 MAP2P11137 1827 aaKnown RBP10.95□□□□□ -0.66
TOP1-201ENST00000361337 MED1Q15648 1581 aaPredicted RBP10.95□□□□□ -0.66
TOP1-201ENST00000361337 IP6K1Q92551 441 aa10.95□□□□□ -0.66
TOP1-201ENST00000361337 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP10.95□□□□□ -0.66
TOP1-201ENST00000361337 UNC5CLQ8IV45 518 aa10.95□□□□□ -0.66
TOP1-201ENST00000361337 SIL1Q9H173 461 aa10.95□□□□□ -0.66
TOP1-201ENST00000361337 RGPD8O14715 1765 aaPredicted RBP10.95□□□□□ -0.66
TOP1-201ENST00000361337 FLT4P35916 1363 aa10.94□□□□□ -0.66
TOP1-201ENST00000361337 TAF7LQ5H9L4 462 aa10.94□□□□□ -0.66
TOP1-201ENST00000361337 CCDC30Q5VVM6 783 aa10.94□□□□□ -0.66
TOP1-201ENST00000361337 EDC4Q6P2E9 1401 aaKnown RBP10.94□□□□□ -0.66
TOP1-201ENST00000361337 BICDL1Q6ZP65 573 aa10.94□□□□□ -0.66
TOP1-201ENST00000361337 BRINP3Q76B58 766 aa10.94□□□□□ -0.66
TOP1-201ENST00000361337 PTPRUQ92729 1446 aa10.94□□□□□ -0.66
TOP1-201ENST00000361337 ABCA3Q99758 1704 aa10.94□□□□□ -0.66
TOP1-201ENST00000361337 CCDC39Q9UFE4 941 aa10.94□□□□□ -0.66
TOP1-201ENST00000361337 ABCC6O95255 1503 aa10.94□□□□□ -0.66
TOP1-201ENST00000361337 ADAMTS13Q76LX8 1427 aa10.94□□□□□ -0.66
TOP1-201ENST00000361337 MAP7D2Q96T17 732 aa10.94□□□□□ -0.66
TOP1-201ENST00000361337 ATP5J2-PTCD1G3V325 749 aa10.93□□□□□ -0.66
TOP1-201ENST00000361337 LARP1Q6PKG0 1096 aaKnown RBP10.93□□□□□ -0.66
TOP1-201ENST00000361337 RILPL2Q969X0 211 aa10.93□□□□□ -0.66
TOP1-201ENST00000361337 ANO2Q9NQ90 1003 aa10.93□□□□□ -0.66
TOP1-201ENST00000361337 TSPY26PQ9H489 355 aa10.93□□□□□ -0.66
TOP1-201ENST00000361337 TTC12Q9H892 705 aaPredicted RBP10.93□□□□□ -0.66
TOP1-201ENST00000361337 USP25Q9UHP3 1055 aa10.93□□□□□ -0.66
TOP1-201ENST00000361337 USP48Q86UV5 1035 aa10.93□□□□□ -0.66
TOP1-201ENST00000361337 ESYT1Q9BSJ8 1104 aa10.93□□□□□ -0.66
TOP1-201ENST00000361337 ZBTB3Q9H5J0 574 aa10.93□□□□□ -0.66
TOP1-201ENST00000361337 WNK3Q9BYP7 1800 aa10.92□□□□□ -0.66
TOP1-201ENST00000361337 CHL1O00533 1208 aa10.92□□□□□ -0.66
TOP1-201ENST00000361337 KCNQ4P56696 695 aa10.92□□□□□ -0.66
TOP1-201ENST00000361337 SASS6Q6UVJ0 657 aa10.92□□□□□ -0.66
TOP1-201ENST00000361337 PNMA6EA0A0J9YXQ4 647 aa10.92□□□□□ -0.66
TOP1-201ENST00000361337 EXOC5O00471 708 aa10.92□□□□□ -0.66
TOP1-201ENST00000361337 APPP05067 770 aa10.92□□□□□ -0.66
TOP1-201ENST00000361337 NEXNQ0ZGT2 675 aa10.92□□□□□ -0.66
TOP1-201ENST00000361337 KIF24Q5T7B8 1368 aa10.92□□□□□ -0.66
TOP1-201ENST00000361337 CUL4AQ13619 759 aa10.92□□□□□ -0.66
TOP1-201ENST00000361337 IL1RAPL2Q9NP60 686 aa10.92□□□□□ -0.66
TOP1-201ENST00000361337 ALS2Q96Q42 1657 aa10.91□□□□□ -0.66
TOP1-201ENST00000361337 PHAXQ9H814 394 aaKnown RBP10.91□□□□□ -0.66
TOP1-201ENST00000361337 KIAA0232Q92628 1395 aa10.91□□□□□ -0.66
TOP1-201ENST00000361337 DYNC1I1O14576 645 aa10.91□□□□□ -0.66
TOP1-201ENST00000361337 MAP4K4O95819 1239 aaPredicted RBP10.91□□□□□ -0.66
TOP1-201ENST00000361337 MBD3O95983 291 aa10.91□□□□□ -0.66
TOP1-201ENST00000361337 CERS3Q8IU89 383 aa10.91□□□□□ -0.66
TOP1-201ENST00000361337 PI4KAP2A4QPH2 592 aa10.91□□□□□ -0.66
TOP1-201ENST00000361337 UBTFL1P0CB47 393 aaPredicted RBP10.91□□□□□ -0.66
TOP1-201ENST00000361337 GPTP24298 496 aa10.91□□□□□ -0.66
TOP1-201ENST00000361337 ZNF710Q8N1W2 664 aa10.91□□□□□ -0.66
TOP1-201ENST00000361337 PI4KAP1Q8N8J0 262 aa10.91□□□□□ -0.66
TOP1-201ENST00000361337 SIRT1Q96EB6 747 aa10.91□□□□□ -0.66
TOP1-201ENST00000361337 CHPF2Q9P2E5 772 aa10.91□□□□□ -0.66
TOP1-201ENST00000361337 SALL3Q9BXA9 1300 aa10.9□□□□□ -0.66
TOP1-201ENST00000361337 SURF6O75683 361 aaKnown RBP10.9□□□□□ -0.66
TOP1-201ENST00000361337 CHMLP26374 656 aa10.9□□□□□ -0.66
TOP1-201ENST00000361337 FAM98CQ17RN3 349 aaKnown RBP10.9□□□□□ -0.66
TOP1-201ENST00000361337 CSPP1Q1MSJ5 1256 aa10.9□□□□□ -0.66
TOP1-201ENST00000361337 IL17REQ8NFR9 667 aa10.9□□□□□ -0.66
TOP1-201ENST00000361337 ZCRB1Q8TBF4 217 aaKnown RBP10.9□□□□□ -0.66
TOP1-201ENST00000361337 CEP170BQ9Y4F5 1589 aaPredicted RBP10.9□□□□□ -0.66
TOP1-201ENST00000361337 CDK12Q9NYV4 1490 aaPredicted RBP10.9□□□□□ -0.66
TOP1-201ENST00000361337 PRAMEF22A3QJZ6 481 aa10.9□□□□□ -0.66
TOP1-201ENST00000361337 HCLS1P14317 486 aaPredicted RBP10.9□□□□□ -0.66
TOP1-201ENST00000361337 MCM5P33992 734 aa10.9□□□□□ -0.66
TOP1-201ENST00000361337 KCNJ4P48050 445 aa10.9□□□□□ -0.66
TOP1-201ENST00000361337 IFNL2Q8IZJ0 200 aa10.9□□□□□ -0.66
TOP1-201ENST00000361337 OSBPL3Q9H4L5 887 aa10.9□□□□□ -0.66
TOP1-201ENST00000361337 TMOD3Q9NYL9 352 aa10.9□□□□□ -0.66
TOP1-201ENST00000361337 CNPY2Q9Y2B0 182 aa10.9□□□□□ -0.66
TOP1-201ENST00000361337 WWC3Q9ULE0 1092 aa10.89□□□□□ -0.67
TOP1-201ENST00000361337 USP6P35125 1406 aa10.89□□□□□ -0.67
TOP1-201ENST00000361337 GORABQ5T7V8 394 aa10.89□□□□□ -0.67
TOP1-201ENST00000361337 SRCIN1Q9C0H9 1055 aa10.89□□□□□ -0.67
TOP1-201ENST00000361337 CPSF1Q10570 1443 aaKnown RBP10.89□□□□□ -0.67
TOP1-201ENST00000361337 MX1P20591 662 aa10.89□□□□□ -0.67
TOP1-201ENST00000361337 KLHL34Q8N239 644 aa10.89□□□□□ -0.67
TOP1-201ENST00000361337 CICQ96RK0 1608 aaPredicted RBP10.88□□□□□ -0.67
TOP1-201ENST00000361337 FLIIQ13045 1269 aa10.88□□□□□ -0.67
TOP1-201ENST00000361337 ARHGEF25Q86VW2 580 aa10.88□□□□□ -0.67
TOP1-201ENST00000361337 PARP4Q9UKK3 1724 aaKnown RBP10.88□□□□□ -0.67
TOP1-201ENST00000361337 AP5Z1O43299 807 aa10.88□□□□□ -0.67
TOP1-201ENST00000361337 HMMRO75330 724 aa10.88□□□□□ -0.67
TOP1-201ENST00000361337 ADCY5O95622 1261 aa10.88□□□□□ -0.67
TOP1-201ENST00000361337 GLI3P10071 1580 aa10.88□□□□□ -0.67
TOP1-201ENST00000361337 ATP7BP35670 1465 aa10.88□□□□□ -0.67
TOP1-201ENST00000361337 CPA1P15085 419 aa10.88□□□□□ -0.67
TOP1-201ENST00000361337 AMOTQ4VCS5 1084 aa10.88□□□□□ -0.67
TOP1-201ENST00000361337 PPP4R3BQ5MIZ7 849 aa10.88□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms