RNA–Protein interactions for RNA: ENST00000360835.8

SCUBE1-202, Transcript of signal peptide, CUB domain and EGF like domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCUBE1, Length 9,808 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCUBE1-202ENST00000360835 ZSCAN16Q9H4T2 348 aaPredicted RBP16.97■□□□□ 0.31
SCUBE1-202ENST00000360835 GDPD2Q9HCC8 539 aa16.97■□□□□ 0.31
SCUBE1-202ENST00000360835 CCDC8Q9H0W5 538 aaPredicted RBP16.97■□□□□ 0.31
SCUBE1-202ENST00000360835 ZNF76P36508 570 aa16.97■□□□□ 0.31
SCUBE1-202ENST00000360835 ABCF2Q9UG63 623 aa16.97■□□□□ 0.31
SCUBE1-202ENST00000360835 FANCAO15360 1455 aa16.96■□□□□ 0.31
SCUBE1-202ENST00000360835 ANAPC15P60006 121 aa16.96■□□□□ 0.31
SCUBE1-202ENST00000360835 SNW1Q13573 536 aaKnown RBP16.96■□□□□ 0.31
SCUBE1-202ENST00000360835 RAB34Q9BZG1 259 aa16.96■□□□□ 0.31
SCUBE1-202ENST00000360835 CCDC171Q6TFL3 1326 aa16.96■□□□□ 0.31
SCUBE1-202ENST00000360835 ZSCAN22P10073 491 aaPredicted RBP16.96■□□□□ 0.31
SCUBE1-202ENST00000360835 ZNF652Q9Y2D9 606 aa16.96■□□□□ 0.31
SCUBE1-202ENST00000360835 PPP4R3BQ5MIZ7 849 aa16.96■□□□□ 0.31
SCUBE1-202ENST00000360835 PRDM10Q9NQV6 1147 aa16.96■□□□□ 0.31
SCUBE1-202ENST00000360835 FAM107BQ9H098 131 aa16.96■□□□□ 0.31
SCUBE1-202ENST00000360835 CAVIN4Q5BKX8 364 aa16.96■□□□□ 0.3
SCUBE1-202ENST00000360835 C14orf93Q9H972 538 aaKnown RBP16.95■□□□□ 0.3
SCUBE1-202ENST00000360835 SLC5A1P13866 664 aa16.95■□□□□ 0.3
SCUBE1-202ENST00000360835 PYM1Q9BRP8 204 aaKnown RBP16.95■□□□□ 0.3
SCUBE1-202ENST00000360835 USO1O60763 962 aaKnown RBP16.95■□□□□ 0.3
SCUBE1-202ENST00000360835 CLCN1P35523 988 aa16.95■□□□□ 0.3
SCUBE1-202ENST00000360835 TRMT1Q9NXH9 659 aaKnown RBP16.95■□□□□ 0.3
SCUBE1-202ENST00000360835 PLCD4Q9BRC7 762 aa16.95■□□□□ 0.3
SCUBE1-202ENST00000360835 LUZP1Q86V48 1076 aa16.95■□□□□ 0.3
SCUBE1-202ENST00000360835 TTF1Q15361 905 aaPredicted RBP16.95■□□□□ 0.3
SCUBE1-202ENST00000360835 CEP135Q66GS9 1140 aa16.95■□□□□ 0.3
SCUBE1-202ENST00000360835 IQCA1Q86XH1 822 aa16.95■□□□□ 0.3
SCUBE1-202ENST00000360835 DESP17661 470 aa16.95■□□□□ 0.3
SCUBE1-202ENST00000360835 CACNA2D4Q7Z3S7 1137 aa16.95■□□□□ 0.3
SCUBE1-202ENST00000360835 TMX3Q96JJ7 454 aa16.95■□□□□ 0.3
SCUBE1-202ENST00000360835 GOLGA8AA7E2F4 631 aa16.94■□□□□ 0.3
SCUBE1-202ENST00000360835 ALS2CR12Q96Q35 445 aa16.94■□□□□ 0.3
SCUBE1-202ENST00000360835 MINDY4BA8MYZ0 360 aa16.94■□□□□ 0.3
SCUBE1-202ENST00000360835 GUCY1B3Q02153 619 aa16.94■□□□□ 0.3
SCUBE1-202ENST00000360835 CCT2P78371 535 aaKnown RBP16.94■□□□□ 0.3
SCUBE1-202ENST00000360835 C8orf34Q49A92 452 aa16.94■□□□□ 0.3
SCUBE1-202ENST00000360835 PPP1R42Q7Z4L9 355 aa16.94■□□□□ 0.3
SCUBE1-202ENST00000360835 TMOD3Q9NYL9 352 aa16.94■□□□□ 0.3
SCUBE1-202ENST00000360835 ANKRD62A6NC57 917 aa16.94■□□□□ 0.3
SCUBE1-202ENST00000360835 RBM5P52756 815 aaKnown RBP eCLIP16.94■□□□□ 0.3
SCUBE1-202ENST00000360835 KANK3Q6NY19 840 aa16.94■□□□□ 0.3
SCUBE1-202ENST00000360835 POTEJP0CG39 1038 aa16.94■□□□□ 0.3
SCUBE1-202ENST00000360835 MAP3K2Q9Y2U5 619 aa16.94■□□□□ 0.3
SCUBE1-202ENST00000360835 SDSP20132 328 aa16.94■□□□□ 0.3
SCUBE1-202ENST00000360835 TMEM266Q2M3C6 531 aa16.94■□□□□ 0.3
SCUBE1-202ENST00000360835 A0A087WZG4 1122 aa16.93■□□□□ 0.3
SCUBE1-202ENST00000360835 CATIPQ7Z7H3 387 aa16.93■□□□□ 0.3
SCUBE1-202ENST00000360835 USP5P45974 858 aa16.93■□□□□ 0.3
SCUBE1-202ENST00000360835 HCLS1P14317 486 aaPredicted RBP16.93■□□□□ 0.3
SCUBE1-202ENST00000360835 USHBP1Q8N6Y0 703 aa16.92■□□□□ 0.3
SCUBE1-202ENST00000360835 MPRIPQ6WCQ1 1025 aa16.92■□□□□ 0.3
SCUBE1-202ENST00000360835 CETN2P41208 172 aa16.92■□□□□ 0.3
SCUBE1-202ENST00000360835 NEK1Q96PY6 1258 aa16.92■□□□□ 0.3
SCUBE1-202ENST00000360835 XRCC6P12956 609 aaKnown RBP eCLIP16.92■□□□□ 0.3
SCUBE1-202ENST00000360835 PCDHB15Q9Y5E8 787 aa16.92■□□□□ 0.3
SCUBE1-202ENST00000360835 IFIT3O14879 490 aaKnown RBP16.92■□□□□ 0.3
SCUBE1-202ENST00000360835 CCDC194A0A1B0GVG4 234 aa16.92■□□□□ 0.3
SCUBE1-202ENST00000360835 KIF20AO95235 890 aa16.91■□□□□ 0.3
SCUBE1-202ENST00000360835 FAM114A1Q8IWE2 563 aa16.91■□□□□ 0.3
SCUBE1-202ENST00000360835 EHBP1Q8NDI1 1231 aa16.91■□□□□ 0.3
SCUBE1-202ENST00000360835 POLR3AO14802 1390 aaPredicted RBP16.91■□□□□ 0.3
SCUBE1-202ENST00000360835 PAFAH1B1P43034 410 aa16.91■□□□□ 0.3
SCUBE1-202ENST00000360835 ZC3H6P61129 1189 aaKnown RBP16.91■□□□□ 0.3
SCUBE1-202ENST00000360835 PIK3C2GO75747 1445 aa16.91■□□□□ 0.3
SCUBE1-202ENST00000360835 SYCP2Q9BX26 1530 aa16.91■□□□□ 0.3
SCUBE1-202ENST00000360835 URB2Q14146 1524 aaKnown RBP16.91■□□□□ 0.3
SCUBE1-202ENST00000360835 TSHZ3Q63HK5 1081 aa16.91■□□□□ 0.3
SCUBE1-202ENST00000360835 MICALCLQ6ZW33 695 aa16.91■□□□□ 0.3
SCUBE1-202ENST00000360835 TFIP11Q9UBB9 837 aaKnown RBP16.91■□□□□ 0.3
SCUBE1-202ENST00000360835 BIN1O00499 593 aa16.91■□□□□ 0.3
SCUBE1-202ENST00000360835 MKNK2Q9HBH9 465 aa16.91■□□□□ 0.3
SCUBE1-202ENST00000360835 ANKRD18BA2A2Z9 1011 aa16.9■□□□□ 0.3
SCUBE1-202ENST00000360835 FAM200AQ8TCP9 573 aa16.9■□□□□ 0.3
SCUBE1-202ENST00000360835 LARP6Q9BRS8 491 aaKnown RBP16.9■□□□□ 0.3
SCUBE1-202ENST00000360835 KLHL34Q8N239 644 aa16.9■□□□□ 0.3
SCUBE1-202ENST00000360835 DYDC1Q8WWB3 177 aa16.9■□□□□ 0.3
SCUBE1-202ENST00000360835 TCOF1Q13428 1488 aaKnown RBP16.9■□□□□ 0.3
SCUBE1-202ENST00000360835 GOLIM4O00461 696 aa16.9■□□□□ 0.3
SCUBE1-202ENST00000360835 HS1BP3Q53T59 392 aa16.9■□□□□ 0.3
SCUBE1-202ENST00000360835 RANBP6O60518 1105 aaKnown RBP16.9■□□□□ 0.3
SCUBE1-202ENST00000360835 TNIP1Q15025 636 aa16.9■□□□□ 0.3
SCUBE1-202ENST00000360835 POLR3GO15318 223 aaPredicted RBP16.89■□□□□ 0.3
SCUBE1-202ENST00000360835 CCDC102BQ68D86 513 aa16.89■□□□□ 0.3
SCUBE1-202ENST00000360835 NAA15Q9BXJ9 866 aaKnown RBP16.89■□□□□ 0.3
SCUBE1-202ENST00000360835 BMS1Q14692 1282 aaKnown RBP16.89■□□□□ 0.29
SCUBE1-202ENST00000360835 USP16Q9Y5T5 823 aa16.89■□□□□ 0.29
SCUBE1-202ENST00000360835 POLR3DP05423 398 aaPredicted RBP16.89■□□□□ 0.29
SCUBE1-202ENST00000360835 NCOA7Q8NI08 942 aa16.89■□□□□ 0.29
SCUBE1-202ENST00000360835 CCDC178Q5BJE1 867 aa16.89■□□□□ 0.29
SCUBE1-202ENST00000360835 CNPY2Q9Y2B0 182 aa16.89■□□□□ 0.29
SCUBE1-202ENST00000360835 ZMYM4Q5VZL5 1548 aa16.89■□□□□ 0.29
SCUBE1-202ENST00000360835 IARSP41252 1262 aaKnown RBP16.89■□□□□ 0.29
SCUBE1-202ENST00000360835 PDE1AP54750 535 aa16.89■□□□□ 0.29
SCUBE1-202ENST00000360835 PTCD1O75127 700 aaKnown RBP16.89■□□□□ 0.29
SCUBE1-202ENST00000360835 METAP2P50579 478 aaKnown RBP eCLIP16.89■□□□□ 0.29
SCUBE1-202ENST00000360835 IFFO1Q0D2I5 559 aa16.89■□□□□ 0.29
SCUBE1-202ENST00000360835 DZIP1Q86YF9 867 aaKnown RBP16.89■□□□□ 0.29
SCUBE1-202ENST00000360835 ESYT1Q9BSJ8 1104 aa16.89■□□□□ 0.29
SCUBE1-202ENST00000360835 PTPRKQ15262 1439 aa16.89■□□□□ 0.29
SCUBE1-202ENST00000360835 CCDC12Q8WUD4 166 aaPredicted RBP16.89■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms