RNA–Protein interactions for RNA: ENST00000360439.8

SIN3A-201, Transcript of SIN3 transcription regulator family member A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SIN3A, Length 5,050 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIN3A-201ENST00000360439 ZNF219Q9P2Y4 722 aaPredicted RBP11.72□□□□□ -0.53
SIN3A-201ENST00000360439 DIP2CQ9Y2E4 1556 aa11.72□□□□□ -0.53
SIN3A-201ENST00000360439 PIK3R4Q99570 1358 aa11.72□□□□□ -0.53
SIN3A-201ENST00000360439 TEX13AQ9BXU3 409 aaPredicted RBP11.72□□□□□ -0.53
SIN3A-201ENST00000360439 GPTP24298 496 aa11.72□□□□□ -0.53
SIN3A-201ENST00000360439 ERC2O15083 957 aa11.71□□□□□ -0.53
SIN3A-201ENST00000360439 ZNF853P0CG23 659 aa11.71□□□□□ -0.53
SIN3A-201ENST00000360439 RXRBP28702 533 aa11.71□□□□□ -0.53
SIN3A-201ENST00000360439 ZNF772Q68DY9 489 aaPredicted RBP11.71□□□□□ -0.53
SIN3A-201ENST00000360439 AKAP4Q5JQC9 854 aa11.71□□□□□ -0.53
SIN3A-201ENST00000360439 CEP83Q9Y592 693 aa11.71□□□□□ -0.53
SIN3A-201ENST00000360439 SURF6O75683 361 aaKnown RBP11.71□□□□□ -0.54
SIN3A-201ENST00000360439 EDC4Q6P2E9 1401 aaKnown RBP11.71□□□□□ -0.54
SIN3A-201ENST00000360439 TPM3P06753 285 aa11.7□□□□□ -0.54
SIN3A-201ENST00000360439 HSP90AB4PQ58FF6 505 aa11.7□□□□□ -0.54
SIN3A-201ENST00000360439 ZRSR1Q15695 479 aaKnown RBP11.7□□□□□ -0.54
SIN3A-201ENST00000360439 CCDC57Q2TAC2 916 aa11.7□□□□□ -0.54
SIN3A-201ENST00000360439 RUFY2Q8WXA3 655 aa11.7□□□□□ -0.54
SIN3A-201ENST00000360439 TNPO1Q92973 898 aaKnown RBP11.7□□□□□ -0.54
SIN3A-201ENST00000360439 MTHFSDQ2M296 383 aaKnown RBP11.7□□□□□ -0.54
SIN3A-201ENST00000360439 ANKRD20A12PQ8NF67 263 aa11.7□□□□□ -0.54
SIN3A-201ENST00000360439 RAD21O60216 631 aa11.7□□□□□ -0.54
SIN3A-201ENST00000360439 APBA3O96018 575 aa11.7□□□□□ -0.54
SIN3A-201ENST00000360439 SNRPA1P09661 255 aaKnown RBP11.7□□□□□ -0.54
SIN3A-201ENST00000360439 LARP1Q6PKG0 1096 aaKnown RBP11.7□□□□□ -0.54
SIN3A-201ENST00000360439 SIL1Q9H173 461 aa11.7□□□□□ -0.54
SIN3A-201ENST00000360439 WWC3Q9ULE0 1092 aa11.7□□□□□ -0.54
SIN3A-201ENST00000360439 RLBP1P12271 317 aa11.69□□□□□ -0.54
SIN3A-201ENST00000360439 LEKR1Q6ZMV7 388 aa11.69□□□□□ -0.54
SIN3A-201ENST00000360439 RNF214Q8ND24 703 aa11.69□□□□□ -0.54
SIN3A-201ENST00000360439 PTPRCP08575 1304 aa11.69□□□□□ -0.54
SIN3A-201ENST00000360439 PCDH11XQ9BZA7 1347 aa11.69□□□□□ -0.54
SIN3A-201ENST00000360439 PCDH11YQ9BZA8 1340 aa11.69□□□□□ -0.54
SIN3A-201ENST00000360439 KIF24Q5T7B8 1368 aa11.69□□□□□ -0.54
SIN3A-201ENST00000360439 NRDCO43847 1150 aa11.69□□□□□ -0.54
SIN3A-201ENST00000360439 FOXD4L6Q3SYB3 417 aaPredicted RBP11.69□□□□□ -0.54
SIN3A-201ENST00000360439 FOXD4L3Q6VB84 417 aaPredicted RBP11.69□□□□□ -0.54
SIN3A-201ENST00000360439 FAM212AQ96EL1 285 aa11.69□□□□□ -0.54
SIN3A-201ENST00000360439 C1orf115Q9H7X2 142 aa11.69□□□□□ -0.54
SIN3A-201ENST00000360439 TRMT112Q9UI30 125 aaKnown RBP11.69□□□□□ -0.54
SIN3A-201ENST00000360439 MYD88Q99836 296 aa11.69□□□□□ -0.54
SIN3A-201ENST00000360439 ZBTB40Q9NUA8 1239 aa11.69□□□□□ -0.54
SIN3A-201ENST00000360439 ANXA1P04083 346 aa11.68□□□□□ -0.54
SIN3A-201ENST00000360439 LIG1P18858 919 aa11.68□□□□□ -0.54
SIN3A-201ENST00000360439 PRIM1P49642 420 aaKnown RBP11.68□□□□□ -0.54
SIN3A-201ENST00000360439 DCAF5Q96JK2 942 aa11.68□□□□□ -0.54
SIN3A-201ENST00000360439 KIAA0232Q92628 1395 aa11.68□□□□□ -0.54
SIN3A-201ENST00000360439 CCP110O43303 1012 aa11.68□□□□□ -0.54
SIN3A-201ENST00000360439 MAP2K1Q02750 393 aaPredicted RBP11.68□□□□□ -0.54
SIN3A-201ENST00000360439 DBF4Q9UBU7 674 aaPredicted RBP11.68□□□□□ -0.54
SIN3A-201ENST00000360439 ABCA6Q8N139 1617 aa11.68□□□□□ -0.54
SIN3A-201ENST00000360439 USP8P40818 1118 aa11.68□□□□□ -0.54
SIN3A-201ENST00000360439 PIP4K2AP48426 406 aaPredicted RBP11.68□□□□□ -0.54
SIN3A-201ENST00000360439 SEMA3FQ13275 785 aa11.68□□□□□ -0.54
SIN3A-201ENST00000360439 NBPF6Q5VWK0 638 aa11.68□□□□□ -0.54
SIN3A-201ENST00000360439 NBPF4Q96M43 638 aa11.68□□□□□ -0.54
SIN3A-201ENST00000360439 ARHGEF40Q8TER5 1519 aa11.68□□□□□ -0.54
SIN3A-201ENST00000360439 CLTCQ00610 1675 aaKnown RBP11.68□□□□□ -0.54
SIN3A-201ENST00000360439 LRRFIP1Q32MZ4 808 aaKnown RBP11.67□□□□□ -0.54
SIN3A-201ENST00000360439 CCDC172P0C7W6 258 aa11.67□□□□□ -0.54
SIN3A-201ENST00000360439 RAB3GAP1Q15042 981 aa11.67□□□□□ -0.54
SIN3A-201ENST00000360439 KLHL40Q2TBA0 621 aa11.67□□□□□ -0.54
SIN3A-201ENST00000360439 FAM182BQ5T319 152 aa11.67□□□□□ -0.54
SIN3A-201ENST00000360439 LMTK2Q8IWU2 1503 aa11.67□□□□□ -0.54
SIN3A-201ENST00000360439 SEC24BO95487 1268 aa11.67□□□□□ -0.54
SIN3A-201ENST00000360439 GNAI2P04899 355 aa11.67□□□□□ -0.54
SIN3A-201ENST00000360439 BAG6P46379 1132 aa11.67□□□□□ -0.54
SIN3A-201ENST00000360439 AMOTL1Q8IY63 956 aa11.67□□□□□ -0.54
SIN3A-201ENST00000360439 IRAK4Q9NWZ3 460 aa11.67□□□□□ -0.54
SIN3A-201ENST00000360439 HSPA1LP34931 641 aa11.67□□□□□ -0.54
SIN3A-201ENST00000360439 CAVIN1Q6NZI2 390 aaKnown RBP11.67□□□□□ -0.54
SIN3A-201ENST00000360439 DNAAF4Q8WXU2 420 aa11.67□□□□□ -0.54
SIN3A-201ENST00000360439 CCNL1Q9UK58 526 aaPredicted RBP11.67□□□□□ -0.54
SIN3A-201ENST00000360439 SATB1Q01826 763 aa11.66□□□□□ -0.54
SIN3A-201ENST00000360439 MFSD4BQ5TF39 518 aa11.66□□□□□ -0.54
SIN3A-201ENST00000360439 TBC1D9Q6ZT07 1266 aa11.66□□□□□ -0.54
SIN3A-201ENST00000360439 TSPY26PQ9H489 355 aa11.66□□□□□ -0.54
SIN3A-201ENST00000360439 PRR36Q9H6K5 1346 aa11.66□□□□□ -0.54
SIN3A-201ENST00000360439 NEBLO76041 1014 aa11.66□□□□□ -0.54
SIN3A-201ENST00000360439 ZSCAN21Q9Y5A6 473 aaPredicted RBP11.66□□□□□ -0.54
SIN3A-201ENST00000360439 SBNO1A3KN83 1393 aa11.66□□□□□ -0.54
SIN3A-201ENST00000360439 MAP2K2P36507 400 aa11.66□□□□□ -0.54
SIN3A-201ENST00000360439 TTC31Q49AM3 519 aaPredicted RBP11.66□□□□□ -0.54
SIN3A-201ENST00000360439 TSC1Q92574 1164 aa11.66□□□□□ -0.54
SIN3A-201ENST00000360439 RTCBQ9Y3I0 505 aaKnown RBP11.66□□□□□ -0.54
SIN3A-201ENST00000360439 POLR3GO15318 223 aaPredicted RBP11.66□□□□□ -0.54
SIN3A-201ENST00000360439 SETSIPP0DME0 302 aa11.66□□□□□ -0.54
SIN3A-201ENST00000360439 MCM5P33992 734 aa11.66□□□□□ -0.54
SIN3A-201ENST00000360439 IGHMBP2P38935 993 aaKnown RBP11.66□□□□□ -0.54
SIN3A-201ENST00000360439 CLASRPQ8N2M8 674 aaKnown RBP11.66□□□□□ -0.54
SIN3A-201ENST00000360439 MRPL50Q8N5N7 158 aaKnown RBP11.66□□□□□ -0.54
SIN3A-201ENST00000360439 U2AF2P26368 475 aaKnown RBP eCLIP11.65□□□□□ -0.543e-6■■■■□ 23.8
SIN3A-201ENST00000360439 RPGRQ92834 1020 aaKnown RBP11.65□□□□□ -0.54
SIN3A-201ENST00000360439 STK32BQ9NY57 414 aa11.65□□□□□ -0.54
SIN3A-201ENST00000360439 ATP5J2-PTCD1G3V325 749 aa11.65□□□□□ -0.54
SIN3A-201ENST00000360439 HYPKQ9NX55 129 aa11.65□□□□□ -0.54
SIN3A-201ENST00000360439 ANO2Q9NQ90 1003 aa11.65□□□□□ -0.54
SIN3A-201ENST00000360439 NBPF5PQ86XG9 351 aaPredicted RBP11.65□□□□□ -0.54
SIN3A-201ENST00000360439 PHACTR3Q96KR7 559 aa11.65□□□□□ -0.54
SIN3A-201ENST00000360439 ADGRB3O60242 1522 aa11.65□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms