RNA–Protein interactions for RNA: ENST00000359526.8

DNMT1-202, Transcript of DNA methyltransferase 1, humanhuman

TSL 1 (best) BASIC

Gene DNMT1, Length 5,206 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-202ENST00000359526 NME9Q86XW9 330 aa14.24□□□□□ -0.13
DNMT1-202ENST00000359526 TRIM27P14373 513 aa14.23□□□□□ -0.13
DNMT1-202ENST00000359526 MYL6BP14649 208 aa14.23□□□□□ -0.13
DNMT1-202ENST00000359526 CAVIN4Q5BKX8 364 aa14.23□□□□□ -0.13
DNMT1-202ENST00000359526 PRPF40BQ6NWY9 871 aaKnown RBP14.23□□□□□ -0.13
DNMT1-202ENST00000359526 CCDC148Q8NFR7 591 aa14.23□□□□□ -0.13
DNMT1-202ENST00000359526 NUP133Q8WUM0 1156 aa14.23□□□□□ -0.13
DNMT1-202ENST00000359526 ARHGAP45Q92619 1136 aa14.23□□□□□ -0.13
DNMT1-202ENST00000359526 GOLGA6L7A0A1B0GV03 622 aa14.23□□□□□ -0.13
DNMT1-202ENST00000359526 SSFA2P28290 1259 aa14.23□□□□□ -0.13
DNMT1-202ENST00000359526 TMCO3Q6UWJ1 677 aa14.23□□□□□ -0.13
DNMT1-202ENST00000359526 EFCAB6Q5THR3 1501 aa14.23□□□□□ -0.13
DNMT1-202ENST00000359526 FOXO3O43524 673 aa14.23□□□□□ -0.13
DNMT1-202ENST00000359526 PZPP20742 1482 aa14.23□□□□□ -0.13
DNMT1-202ENST00000359526 SNRPA1P09661 255 aaKnown RBP14.23□□□□□ -0.13
DNMT1-202ENST00000359526 HDAC1Q13547 482 aaPredicted RBP14.23□□□□□ -0.13
DNMT1-202ENST00000359526 CFAP100Q494V2 611 aa14.23□□□□□ -0.13
DNMT1-202ENST00000359526 MYOM2P54296 1465 aa14.23□□□□□ -0.13
DNMT1-202ENST00000359526 ARHGAP29Q52LW3 1261 aa14.22□□□□□ -0.13
DNMT1-202ENST00000359526 CDC5LQ99459 802 aaKnown RBP14.22□□□□□ -0.13
DNMT1-202ENST00000359526 PTPRKQ15262 1439 aa14.22□□□□□ -0.13
DNMT1-202ENST00000359526 MCM3P25205 808 aa14.22□□□□□ -0.13
DNMT1-202ENST00000359526 TDO2P48775 406 aa14.22□□□□□ -0.13
DNMT1-202ENST00000359526 KLHL40Q2TBA0 621 aa14.22□□□□□ -0.13
DNMT1-202ENST00000359526 FAM177A1Q8N128 213 aaPredicted RBP14.22□□□□□ -0.13
DNMT1-202ENST00000359526 PHAXQ9H814 394 aaKnown RBP14.22□□□□□ -0.13
DNMT1-202ENST00000359526 DYNC1I1O14576 645 aa14.21□□□□□ -0.13
DNMT1-202ENST00000359526 PLCD4Q9BRC7 762 aa14.21□□□□□ -0.13
DNMT1-202ENST00000359526 KDM5CP41229 1560 aa14.21□□□□□ -0.13
DNMT1-202ENST00000359526 GSDMDP57764 484 aa14.21□□□□□ -0.13
DNMT1-202ENST00000359526 ZCRB1Q8TBF4 217 aaKnown RBP14.21□□□□□ -0.13
DNMT1-202ENST00000359526 TANGO6Q9C0B7 1094 aa14.21□□□□□ -0.13
DNMT1-202ENST00000359526 NYXQ9GZU5 481 aa14.21□□□□□ -0.13
DNMT1-202ENST00000359526 ST5P78524 1137 aa14.21□□□□□ -0.13
DNMT1-202ENST00000359526 ZNF397Q8NF99 534 aaPredicted RBP14.21□□□□□ -0.13
DNMT1-202ENST00000359526 CCDC196A0A1B0GTZ2 297 aa14.21□□□□□ -0.14
DNMT1-202ENST00000359526 SMARCA5O60264 1052 aaPredicted RBP14.21□□□□□ -0.14
DNMT1-202ENST00000359526 PCDH11XQ9BZA7 1347 aa14.21□□□□□ -0.14
DNMT1-202ENST00000359526 PCDH11YQ9BZA8 1340 aa14.21□□□□□ -0.14
DNMT1-202ENST00000359526 SLC5A1P13866 664 aa14.2□□□□□ -0.14
DNMT1-202ENST00000359526 TTF1Q15361 905 aaPredicted RBP14.2□□□□□ -0.14
DNMT1-202ENST00000359526 SPTY2D1Q68D10 685 aaPredicted RBP14.2□□□□□ -0.14
DNMT1-202ENST00000359526 TBC1D9Q6ZT07 1266 aa14.2□□□□□ -0.14
DNMT1-202ENST00000359526 DDX11Q96FC9 970 aa14.2□□□□□ -0.14
DNMT1-202ENST00000359526 LDHCP07864 332 aa14.2□□□□□ -0.14
DNMT1-202ENST00000359526 CAMK4Q16566 473 aa14.2□□□□□ -0.14
DNMT1-202ENST00000359526 MCM10Q7L590 875 aa14.19□□□□□ -0.14
DNMT1-202ENST00000359526 SKAP1Q86WV1 359 aa14.19□□□□□ -0.14
DNMT1-202ENST00000359526 AIDAQ96BJ3 306 aa14.19□□□□□ -0.14
DNMT1-202ENST00000359526 EVI5LQ96CN4 794 aa14.19□□□□□ -0.14
DNMT1-202ENST00000359526 SBNO2Q9Y2G9 1366 aa14.19□□□□□ -0.14
DNMT1-202ENST00000359526 BAG4O95429 457 aaKnown RBP14.19□□□□□ -0.14
DNMT1-202ENST00000359526 CLIP2Q9UDT6 1046 aa14.19□□□□□ -0.14
DNMT1-202ENST00000359526 COL17A1Q9UMD9 1497 aaPredicted RBP14.19□□□□□ -0.14
DNMT1-202ENST00000359526 FAM177BA6PVY3 158 aa14.19□□□□□ -0.14
DNMT1-202ENST00000359526 MAP9Q49MG5 647 aa14.19□□□□□ -0.14
DNMT1-202ENST00000359526 CCDC178Q5BJE1 867 aa14.19□□□□□ -0.14
DNMT1-202ENST00000359526 ANKRD18BA2A2Z9 1011 aa14.19□□□□□ -0.14
DNMT1-202ENST00000359526 IL2RBP14784 551 aa14.19□□□□□ -0.14
DNMT1-202ENST00000359526 ZRSR2Q15696 482 aaKnown RBP14.19□□□□□ -0.14
DNMT1-202ENST00000359526 ARHGAP31Q2M1Z3 1444 aa14.19□□□□□ -0.14
DNMT1-202ENST00000359526 KIAA1328Q86T90 577 aa14.19□□□□□ -0.14
DNMT1-202ENST00000359526 ANKRD18AQ8IVF6 992 aa14.19□□□□□ -0.14
DNMT1-202ENST00000359526 KLHL34Q8N239 644 aa14.19□□□□□ -0.14
DNMT1-202ENST00000359526 EIF5P55010 431 aaKnown RBP14.18□□□□□ -0.14
DNMT1-202ENST00000359526 RPGRQ92834 1020 aaKnown RBP14.18□□□□□ -0.14
DNMT1-202ENST00000359526 CCDC102AQ96A19 550 aa14.18□□□□□ -0.14
DNMT1-202ENST00000359526 THUMPD2Q9BTF0 503 aaKnown RBP14.18□□□□□ -0.14
DNMT1-202ENST00000359526 RTL1A6NKG5 1358 aa14.18□□□□□ -0.14
DNMT1-202ENST00000359526 TTC22Q5TAA0 569 aa14.18□□□□□ -0.14
DNMT1-202ENST00000359526 NBPF14Q5TI25 921 aa14.18□□□□□ -0.14
DNMT1-202ENST00000359526 FERMT3Q86UX7 667 aa14.18□□□□□ -0.14
DNMT1-202ENST00000359526 DNAAF4Q8WXU2 420 aa14.18□□□□□ -0.14
DNMT1-202ENST00000359526 TAF4BQ92750 862 aa14.18□□□□□ -0.14
DNMT1-202ENST00000359526 KIF5CO60282 957 aa14.18□□□□□ -0.14
DNMT1-202ENST00000359526 TRAF1Q13077 416 aa14.18□□□□□ -0.14
DNMT1-202ENST00000359526 WWC2Q6AWC2 1192 aa14.18□□□□□ -0.14
DNMT1-202ENST00000359526 UTP3Q9NQZ2 479 aaKnown RBP eCLIP14.18□□□□□ -0.142e-6■■■■■ 66.3
DNMT1-202ENST00000359526 C8orf76Q96K31 380 aa14.18□□□□□ -0.14
DNMT1-202ENST00000359526 SBNO1A3KN83 1393 aa14.18□□□□□ -0.14
DNMT1-202ENST00000359526 ALDH1L1O75891 902 aa14.18□□□□□ -0.14
DNMT1-202ENST00000359526 ZGPATQ8N5A5 531 aaKnown RBP14.18□□□□□ -0.14
DNMT1-202ENST00000359526 POTEB2H3BUK9 544 aa14.17□□□□□ -0.14
DNMT1-202ENST00000359526 GSTO1P78417 241 aa14.17□□□□□ -0.14
DNMT1-202ENST00000359526 NUCB1Q02818 461 aa14.17□□□□□ -0.14
DNMT1-202ENST00000359526 PRIMPOLQ96LW4 560 aa14.17□□□□□ -0.14
DNMT1-202ENST00000359526 TOP1P11387 765 aaKnown RBP14.17□□□□□ -0.14
DNMT1-202ENST00000359526 CASQ1P31415 396 aa14.17□□□□□ -0.14
DNMT1-202ENST00000359526 UBE2HP62256 183 aa14.17□□□□□ -0.14
DNMT1-202ENST00000359526 DISP3Q9P2K9 1392 aa14.17□□□□□ -0.14
DNMT1-202ENST00000359526 GOLGA6L9A6NEM1 432 aa14.17□□□□□ -0.14
DNMT1-202ENST00000359526 STX6O43752 255 aa14.17□□□□□ -0.14
DNMT1-202ENST00000359526 SAMD1Q6SPF0 538 aaPredicted RBP14.17□□□□□ -0.14
DNMT1-202ENST00000359526 TRERF1Q96PN7 1200 aa14.17□□□□□ -0.14
DNMT1-202ENST00000359526 HMG20BQ9P0W2 317 aa14.17□□□□□ -0.14
DNMT1-202ENST00000359526 STX1AQ16623 288 aa14.16□□□□□ -0.14
DNMT1-202ENST00000359526 IGHDP01880 384 aa14.16□□□□□ -0.14
DNMT1-202ENST00000359526 HOXB7P09629 217 aa14.16□□□□□ -0.14
DNMT1-202ENST00000359526 IFIT5Q13325 482 aaKnown RBP14.16□□□□□ -0.14
DNMT1-202ENST00000359526 SNX21Q969T3 373 aa14.16□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 10.2 ms