RNA–Protein interactions for RNA: ENST00000359461.10

YIF1A-201, Transcript of Yip1 interacting factor homolog A, membrane trafficking protein, humanhuman

TSL 2 BASIC

Gene YIF1A, Length 943 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YIF1A-201ENST00000359461 POTECB2RU33 542 aa30.81■■■□□ 2.52
YIF1A-201ENST00000359461 STYK1Q6J9G0 422 aa30.81■■■□□ 2.52
YIF1A-201ENST00000359461 KDM3BQ7LBC6 1761 aa30.8■■■□□ 2.52
YIF1A-201ENST00000359461 PRAMEF22A3QJZ6 481 aa30.8■■■□□ 2.52
YIF1A-201ENST00000359461 SRGNP10124 158 aa30.8■■■□□ 2.52
YIF1A-201ENST00000359461 U2AF1L5P0DN76 240 aaPredicted RBP30.79■■■□□ 2.52
YIF1A-201ENST00000359461 ST5P78524 1137 aa30.79■■■□□ 2.52
YIF1A-201ENST00000359461 U2AF1Q01081 240 aaKnown RBP eCLIP30.79■■■□□ 2.52
YIF1A-201ENST00000359461 CLEC4GQ6UXB4 293 aa30.79■■■□□ 2.52
YIF1A-201ENST00000359461 MCM10Q7L590 875 aa30.79■■■□□ 2.52
YIF1A-201ENST00000359461 PCNTO95613 3336 aa30.79■■■□□ 2.52
YIF1A-201ENST00000359461 SNRPA1P09661 255 aaKnown RBP30.78■■■□□ 2.52
YIF1A-201ENST00000359461 CNKSR1Q969H4 720 aa30.78■■■□□ 2.52
YIF1A-201ENST00000359461 RGL2O15211 777 aa30.77■■■□□ 2.52
YIF1A-201ENST00000359461 PIP4K2AP48426 406 aaPredicted RBP30.77■■■□□ 2.52
YIF1A-201ENST00000359461 PRPF40BQ6NWY9 871 aaKnown RBP30.77■■■□□ 2.52
YIF1A-201ENST00000359461 RTF1Q92541 710 aaKnown RBP30.77■■■□□ 2.52
YIF1A-201ENST00000359461 TAOK3Q9H2K8 898 aa30.77■■■□□ 2.52
YIF1A-201ENST00000359461 HTATSF1O43719 755 aaKnown RBP30.76■■■□□ 2.51
YIF1A-201ENST00000359461 ERFEQ4G0M1 354 aa30.76■■■□□ 2.51
YIF1A-201ENST00000359461 MASTLQ96GX5 879 aa30.76■■■□□ 2.51
YIF1A-201ENST00000359461 ZNF219Q9P2Y4 722 aaPredicted RBP30.76■■■□□ 2.51
YIF1A-201ENST00000359461 DPY19L2Q6NUT2 758 aa30.75■■■□□ 2.51
YIF1A-201ENST00000359461 NPHP1O15259 732 aa30.74■■■□□ 2.51
YIF1A-201ENST00000359461 ZNF652Q9Y2D9 606 aa30.74■■■□□ 2.51
YIF1A-201ENST00000359461 NBPF26B4DH59 902 aa30.73■■■□□ 2.51
YIF1A-201ENST00000359461 SOGA3Q5TF21 947 aa30.73■■■□□ 2.51
YIF1A-201ENST00000359461 NBPF10Q6P3W6 841 aaKnown RBP30.73■■■□□ 2.51
YIF1A-201ENST00000359461 NBPF15Q8N660 670 aa30.73■■■□□ 2.51
YIF1A-201ENST00000359461 SCN4AP35499 1836 aa30.73■■■□□ 2.51
YIF1A-201ENST00000359461 DCTN1Q14203 1278 aa30.72■■■□□ 2.51
YIF1A-201ENST00000359461 NBPF5PQ86XG9 351 aaPredicted RBP30.72■■■□□ 2.51
YIF1A-201ENST00000359461 NUP98P52948 1817 aa30.72■■■□□ 2.51
YIF1A-201ENST00000359461 KLRG2A4D1S0 409 aaPredicted RBP30.71■■■□□ 2.51
YIF1A-201ENST00000359461 C7orf43Q8WVR3 580 aa30.71■■■□□ 2.51
YIF1A-201ENST00000359461 NPR1P16066 1061 aa30.67■■■□□ 2.5
YIF1A-201ENST00000359461 TAF7Q15545 349 aaPredicted RBP30.67■■■□□ 2.5
YIF1A-201ENST00000359461 NIP7Q9Y221 180 aaKnown RBP eCLIP30.66■■■□□ 2.5
YIF1A-201ENST00000359461 CCDC93Q567U6 631 aa30.65■■■□□ 2.5
YIF1A-201ENST00000359461 DDNO94850 711 aaPredicted RBP30.64■■■□□ 2.5
YIF1A-201ENST00000359461 TPTE2Q6XPS3 522 aa30.64■■■□□ 2.5
YIF1A-201ENST00000359461 COL13A1Q5TAT6 717 aaPredicted RBP30.63■■■□□ 2.49
YIF1A-201ENST00000359461 ADAMTSL1Q8N6G6 1762 aa30.61■■■□□ 2.49
YIF1A-201ENST00000359461 HLFQ16534 295 aa30.61■■■□□ 2.49
YIF1A-201ENST00000359461 CHADLQ6NUI6 762 aa30.61■■■□□ 2.49
YIF1A-201ENST00000359461 L3MBTL3Q96JM7 780 aaPredicted RBP30.61■■■□□ 2.49
YIF1A-201ENST00000359461 SNED1Q8TER0 1413 aa30.61■■■□□ 2.49
YIF1A-201ENST00000359461 FKBP4Q02790 459 aaKnown RBP eCLIP30.6■■■□□ 2.49
YIF1A-201ENST00000359461 POTEIP0CG38 1075 aa30.59■■■□□ 2.49
YIF1A-201ENST00000359461 POTEJP0CG39 1038 aa30.59■■■□□ 2.49
YIF1A-201ENST00000359461 MIS18AQ9NYP9 233 aa30.59■■■□□ 2.49
YIF1A-201ENST00000359461 RIC1Q4ADV7 1423 aa30.58■■■□□ 2.49
YIF1A-201ENST00000359461 PLEKHF1Q96S99 279 aa30.58■■■□□ 2.49
YIF1A-201ENST00000359461 ABCC12Q96J65 1359 aa30.57■■■□□ 2.48
YIF1A-201ENST00000359461 PNISRQ8TF01 805 aaKnown RBP30.57■■■□□ 2.48
YIF1A-201ENST00000359461 IQCA1LA6NCM1 817 aa30.56■■■□□ 2.48
YIF1A-201ENST00000359461 CREBZFQ9NS37 354 aa30.56■■■□□ 2.48
YIF1A-201ENST00000359461 IBTKQ9P2D0 1353 aaPredicted RBP30.55■■■□□ 2.48
YIF1A-201ENST00000359461 ERVV-1B6SEH8 477 aa30.55■■■□□ 2.48
YIF1A-201ENST00000359461 CRY2Q49AN0 593 aa30.55■■■□□ 2.48
YIF1A-201ENST00000359461 OLFM4Q6UX06 510 aa30.55■■■□□ 2.48
YIF1A-201ENST00000359461 ZNF541Q9H0D2 1346 aa30.54■■■□□ 2.48
YIF1A-201ENST00000359461 FAM177BA6PVY3 158 aa30.54■■■□□ 2.48
YIF1A-201ENST00000359461 HSPA1AP0DMV8 641 aaKnown RBP30.54■■■□□ 2.48
YIF1A-201ENST00000359461 HSPA1BP0DMV9 641 aaKnown RBP30.54■■■□□ 2.48
YIF1A-201ENST00000359461 EIF4A1P60842 406 aaKnown RBP30.54■■■□□ 2.48
YIF1A-201ENST00000359461 RTKN2Q8IZC4 609 aa30.54■■■□□ 2.48
YIF1A-201ENST00000359461 MAP3K15Q6ZN16 1313 aa30.53■■■□□ 2.48
YIF1A-201ENST00000359461 NEFMP07197 916 aa30.53■■■□□ 2.48
YIF1A-201ENST00000359461 ALDH1B1P30837 517 aa30.53■■■□□ 2.48
YIF1A-201ENST00000359461 TAF1DQ9H5J8 278 aaPredicted RBP30.53■■■□□ 2.48
YIF1A-201ENST00000359461 ZNF277Q9NRM2 450 aaPredicted RBP30.53■■■□□ 2.48
YIF1A-201ENST00000359461 PASKQ96RG2 1323 aa30.52■■■□□ 2.48
YIF1A-201ENST00000359461 NFE2L2Q16236 605 aa30.52■■■□□ 2.48
YIF1A-201ENST00000359461 LDHDQ86WU2 507 aa30.52■■■□□ 2.48
YIF1A-201ENST00000359461 NYXQ9GZU5 481 aa30.52■■■□□ 2.48
YIF1A-201ENST00000359461 TTLL7Q6ZT98 887 aa30.49■■■□□ 2.47
YIF1A-201ENST00000359461 THUMPD2Q9BTF0 503 aaKnown RBP30.49■■■□□ 2.47
YIF1A-201ENST00000359461 COL4A5P29400 1685 aa30.49■■■□□ 2.47
YIF1A-201ENST00000359461 ANKRD36CQ5JPF3 1778 aa30.49■■■□□ 2.47
YIF1A-201ENST00000359461 UBN2Q6ZU65 1347 aa30.48■■■□□ 2.47
YIF1A-201ENST00000359461 FZD9O00144 591 aa30.48■■■□□ 2.47
YIF1A-201ENST00000359461 GTF2E1P29083 439 aaPredicted RBP30.48■■■□□ 2.47
YIF1A-201ENST00000359461 IARSP41252 1262 aaKnown RBP30.48■■■□□ 2.47
YIF1A-201ENST00000359461 PSMD1Q99460 953 aa30.48■■■□□ 2.47
YIF1A-201ENST00000359461 KIF6Q6ZMV9 814 aa30.47■■■□□ 2.47
YIF1A-201ENST00000359461 NUTM1Q86Y26 1132 aa30.47■■■□□ 2.47
YIF1A-201ENST00000359461 ERBB4Q15303 1308 aa30.47■■■□□ 2.47
YIF1A-201ENST00000359461 CNTNAP1P78357 1384 aa30.46■■■□□ 2.47
YIF1A-201ENST00000359461 TNS4Q8IZW8 715 aa30.46■■■□□ 2.47
YIF1A-201ENST00000359461 SYNE4Q8N205 404 aa30.46■■■□□ 2.47
YIF1A-201ENST00000359461 NGEFQ8N5V2 710 aa30.46■■■□□ 2.47
YIF1A-201ENST00000359461 RRP7AQ9Y3A4 280 aaKnown RBP30.46■■■□□ 2.47
YIF1A-201ENST00000359461 HOXA10P31260 410 aaPredicted RBP30.45■■■□□ 2.47
YIF1A-201ENST00000359461 HACL1Q9UJ83 578 aa30.45■■■□□ 2.47
YIF1A-201ENST00000359461 LTBP1Q14766 1721 aa30.44■■■□□ 2.46
YIF1A-201ENST00000359461 CC2D2BQ6DHV5 1058 aa30.44■■■□□ 2.46
YIF1A-201ENST00000359461 MKRN1Q9UHC7 482 aaKnown RBP30.44■■■□□ 2.46
YIF1A-201ENST00000359461 LAMB2P55268 1798 aa30.43■■■□□ 2.46
YIF1A-201ENST00000359461 ITGBL1O95965 494 aaPredicted RBP30.43■■■□□ 2.46
Retrieved 100 of 20,778 RNA–protein pairs in 8.9 ms