RNA–Protein interactions for RNA: ENST00000359128.9

NLRC3-202, Transcript of NLR family CARD domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NLRC3, Length 6,401 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NLRC3-202ENST00000359128 ZGPATQ8N5A5 531 aaKnown RBP15.07■□□□□ 0
NLRC3-202ENST00000359128 STXBP4Q6ZWJ1 553 aa15.06■□□□□ 0
NLRC3-202ENST00000359128 NPHP3Q7Z494 1330 aa15.06■□□□□ 0
NLRC3-202ENST00000359128 NOS1P29475 1434 aa15.06■□□□□ 0
NLRC3-202ENST00000359128 IDI1Q13907 227 aa15.06■□□□□ 0
NLRC3-202ENST00000359128 CCDC148Q8NFR7 591 aa15.06■□□□□ 0
NLRC3-202ENST00000359128 PTPRCP08575 1304 aa15.06■□□□□ 0
NLRC3-202ENST00000359128 F8W031 263 aaPredicted RBP15.06■□□□□ 0
NLRC3-202ENST00000359128 LEKR1Q6ZMV7 388 aa15.06■□□□□ 0
NLRC3-202ENST00000359128 NYXQ9GZU5 481 aa15.06■□□□□ 0
NLRC3-202ENST00000359128 TTC21AQ8NDW8 1320 aa15.05■□□□□ 0
NLRC3-202ENST00000359128 ERLIN1O75477 346 aa15.05■□□□□ 0
NLRC3-202ENST00000359128 DDB1Q16531 1140 aa15.05■□□□□ 0
NLRC3-202ENST00000359128 NCOA1Q15788 1441 aa15.05■□□□□ 0
NLRC3-202ENST00000359128 BICD1Q96G01 975 aa15.05■□□□□ -0
NLRC3-202ENST00000359128 TFCP2L1Q9NZI6 479 aa15.05■□□□□ -0
NLRC3-202ENST00000359128 PCF11O94913 1555 aaKnown RBP15.05■□□□□ -0
NLRC3-202ENST00000359128 ACEP12821 1306 aa15.05■□□□□ -0
NLRC3-202ENST00000359128 GOLIM4O00461 696 aa15.05■□□□□ -0
NLRC3-202ENST00000359128 SYCP3Q8IZU3 236 aa15.05■□□□□ -0
NLRC3-202ENST00000359128 LMOD1P29536 600 aaPredicted RBP15.05■□□□□ -0
NLRC3-202ENST00000359128 ZNF804AQ7Z570 1209 aa15.05■□□□□ -0
NLRC3-202ENST00000359128 UQCRFS1P1P0C7P4 283 aa15.04■□□□□ -0
NLRC3-202ENST00000359128 FAM193AP78312 1265 aa15.04■□□□□ -0
NLRC3-202ENST00000359128 CETN1Q12798 172 aa15.04■□□□□ -0
NLRC3-202ENST00000359128 MFSD6Q6ZSS7 791 aa15.04■□□□□ -0
NLRC3-202ENST00000359128 ABCC5O15440 1437 aa15.04■□□□□ -0
NLRC3-202ENST00000359128 CFAP100Q494V2 611 aa15.04■□□□□ -0
NLRC3-202ENST00000359128 TMEM67Q5HYA8 995 aa15.04■□□□□ -0
NLRC3-202ENST00000359128 SLFN5Q08AF3 891 aa15.04■□□□□ -0
NLRC3-202ENST00000359128 KLHL10Q6JEL2 608 aa15.04■□□□□ -0
NLRC3-202ENST00000359128 CCDC91Q7Z6B0 441 aa15.04■□□□□ -0
NLRC3-202ENST00000359128 MAP3K9P80192 1104 aa15.04■□□□□ -0
NLRC3-202ENST00000359128 PPP4R3BQ5MIZ7 849 aa15.04■□□□□ -0
NLRC3-202ENST00000359128 AMPD3Q01432 767 aa15.04■□□□□ -0
NLRC3-202ENST00000359128 CKAP2LQ8IYA6 745 aa15.04■□□□□ -0
NLRC3-202ENST00000359128 GUCY1B3Q02153 619 aa15.03■□□□□ -0
NLRC3-202ENST00000359128 EVI5LQ96CN4 794 aa15.03■□□□□ -0
NLRC3-202ENST00000359128 TSPY3P0CV98 308 aa15.03■□□□□ -0
NLRC3-202ENST00000359128 TSPY8P0CW00 308 aa15.03■□□□□ -0
NLRC3-202ENST00000359128 ADGRF5Q8IZF2 1346 aa15.03■□□□□ -0
NLRC3-202ENST00000359128 PLCD3Q8N3E9 789 aa15.03■□□□□ -0
NLRC3-202ENST00000359128 PIK3R4Q99570 1358 aa15.03■□□□□ -0
NLRC3-202ENST00000359128 CCDC144CPQ8IYA2 1237 aa15.03■□□□□ -0
NLRC3-202ENST00000359128 CTNNBL1Q8WYA6 563 aaPredicted RBP15.02■□□□□ -0
NLRC3-202ENST00000359128 NLRP3Q96P20 1036 aa15.02■□□□□ -0
NLRC3-202ENST00000359128 CAMK4Q16566 473 aa15.02■□□□□ -0
NLRC3-202ENST00000359128 MAP3K11Q16584 847 aa15.02■□□□□ -0
NLRC3-202ENST00000359128 TCP11L1Q9NUJ3 509 aa15.02■□□□□ -0
NLRC3-202ENST00000359128 COMMD10Q9Y6G5 202 aa15.02■□□□□ -0
NLRC3-202ENST00000359128 ABCA10Q8WWZ4 1543 aa15.02■□□□□ -0
NLRC3-202ENST00000359128 PICALMQ13492 652 aa15.02■□□□□ -0
NLRC3-202ENST00000359128 GOLGA6L7A0A1B0GV03 622 aa15.02□□□□□ -0.01
NLRC3-202ENST00000359128 FLIIQ13045 1269 aa15.02□□□□□ -0.01
NLRC3-202ENST00000359128 PLS1Q14651 629 aa15.02□□□□□ -0.01
NLRC3-202ENST00000359128 VEZTQ9HBM0 779 aa15.02□□□□□ -0.01
NLRC3-202ENST00000359128 ARHGAP29Q52LW3 1261 aa15.02□□□□□ -0.01
NLRC3-202ENST00000359128 JDP2Q8WYK2 163 aa15.02□□□□□ -0.01
NLRC3-202ENST00000359128 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP15.02□□□□□ -0.01
NLRC3-202ENST00000359128 CTNNA2P26232 953 aa15.01□□□□□ -0.01
NLRC3-202ENST00000359128 SH2B1Q9NRF2 756 aaPredicted RBP15.01□□□□□ -0.01
NLRC3-202ENST00000359128 LMTK3Q96Q04 1460 aa15.01□□□□□ -0.01
NLRC3-202ENST00000359128 CCDC178Q5BJE1 867 aa15.01□□□□□ -0.01
NLRC3-202ENST00000359128 RBM26Q5T8P6 1007 aaKnown RBP15.01□□□□□ -0.01
NLRC3-202ENST00000359128 PABPN1LA6NDY0 278 aaKnown RBP15.01□□□□□ -0.01
NLRC3-202ENST00000359128 CALRP27797 417 aaKnown RBP15.01□□□□□ -0.01
NLRC3-202ENST00000359128 UBE3BQ7Z3V4 1068 aa15.01□□□□□ -0.01
NLRC3-202ENST00000359128 PRXQ9BXM0 1461 aa15.01□□□□□ -0.01
NLRC3-202ENST00000359128 EIF3JO75822 258 aaKnown RBP15.01□□□□□ -0.01
NLRC3-202ENST00000359128 UTP14AQ9BVJ6 771 aaKnown RBP15.01□□□□□ -0.01
NLRC3-202ENST00000359128 PUF60Q9UHX1 559 aaKnown RBP15.01□□□□□ -0.01
NLRC3-202ENST00000359128 RTCBQ9Y3I0 505 aaKnown RBP15.01□□□□□ -0.01
NLRC3-202ENST00000359128 SNRKQ9NRH2 765 aa15□□□□□ -0.01
NLRC3-202ENST00000359128 WWC3Q9ULE0 1092 aa15□□□□□ -0.01
NLRC3-202ENST00000359128 NIP7Q9Y221 180 aaKnown RBP eCLIP15□□□□□ -0.01
NLRC3-202ENST00000359128 NSD2O96028 1365 aa15□□□□□ -0.01
NLRC3-202ENST00000359128 KIAA0754O94854 1291 aa15□□□□□ -0.01
NLRC3-202ENST00000359128 CCT2P78371 535 aaKnown RBP15□□□□□ -0.01
NLRC3-202ENST00000359128 HMGN5P82970 282 aaKnown RBP15□□□□□ -0.01
NLRC3-202ENST00000359128 TRAF1Q13077 416 aa15□□□□□ -0.01
NLRC3-202ENST00000359128 HOMER2Q9NSB8 354 aa15□□□□□ -0.01
NLRC3-202ENST00000359128 DHX29Q7Z478 1369 aaKnown RBP15□□□□□ -0.01
NLRC3-202ENST00000359128 B4DLN1 442 aa14.99□□□□□ -0.01
NLRC3-202ENST00000359128 MRPL12P52815 198 aaKnown RBP14.99□□□□□ -0.01
NLRC3-202ENST00000359128 WDR7Q9Y4E6 1490 aa14.99□□□□□ -0.01
NLRC3-202ENST00000359128 CNNM3Q8NE01 707 aa14.99□□□□□ -0.01
NLRC3-202ENST00000359128 JARID2Q92833 1246 aaPredicted RBP14.99□□□□□ -0.01
NLRC3-202ENST00000359128 LRRC27Q9C0I9 530 aa14.99□□□□□ -0.01
NLRC3-202ENST00000359128 ANKRD13DQ6ZTN6 518 aa14.99□□□□□ -0.01
NLRC3-202ENST00000359128 FERMT3Q86UX7 667 aa14.99□□□□□ -0.01
NLRC3-202ENST00000359128 CYP7A1P22680 504 aa14.98□□□□□ -0.01
NLRC3-202ENST00000359128 USP8P40818 1118 aa14.98□□□□□ -0.01
NLRC3-202ENST00000359128 CCDC40Q4G0X9 1142 aa14.98□□□□□ -0.01
NLRC3-202ENST00000359128 NCOA7Q8NI08 942 aa14.98□□□□□ -0.01
NLRC3-202ENST00000359128 SSH1Q8WYL5 1049 aa14.98□□□□□ -0.01
NLRC3-202ENST00000359128 PLCD4Q9BRC7 762 aa14.98□□□□□ -0.01
NLRC3-202ENST00000359128 BIN2Q9UBW5 565 aaPredicted RBP14.98□□□□□ -0.01
NLRC3-202ENST00000359128 METAP2P50579 478 aaKnown RBP eCLIP14.98□□□□□ -0.01
NLRC3-202ENST00000359128 TAF3Q5VWG9 929 aa14.98□□□□□ -0.01
NLRC3-202ENST00000359128 FERMT1Q9BQL6 677 aa14.98□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms