RNA–Protein interactions for RNA: ENST00000358730.6

RFX3-202, Transcript of regulatory factor X3, humanhuman

TSL 1 (best) BASIC

Gene RFX3, Length 2,971 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX3-202ENST00000358730 ALDH1L1O75891 902 aa10.36□□□□□ -0.75
RFX3-202ENST00000358730 AK2P54819 239 aa10.36□□□□□ -0.75
RFX3-202ENST00000358730 ARHGEF25Q86VW2 580 aa10.36□□□□□ -0.75
RFX3-202ENST00000358730 TTC14Q96N46 770 aa10.36□□□□□ -0.75
RFX3-202ENST00000358730 PA2G4Q9UQ80 394 aaKnown RBP10.36□□□□□ -0.75
RFX3-202ENST00000358730 IFIT2P09913 472 aaKnown RBP10.36□□□□□ -0.75
RFX3-202ENST00000358730 KSR2Q6VAB6 950 aa10.36□□□□□ -0.75
RFX3-202ENST00000358730 SYAP1Q96A49 352 aaPredicted RBP10.36□□□□□ -0.75
RFX3-202ENST00000358730 ORAI2Q96SN7 254 aa10.36□□□□□ -0.75
RFX3-202ENST00000358730 SIPA1L3O60292 1781 aaPredicted RBP10.36□□□□□ -0.75
RFX3-202ENST00000358730 CASTP20810 708 aaKnown RBP10.35□□□□□ -0.75
RFX3-202ENST00000358730 ERC1Q8IUD2 1116 aa10.35□□□□□ -0.75
RFX3-202ENST00000358730 RUFY2Q8WXA3 655 aa10.35□□□□□ -0.75
RFX3-202ENST00000358730 LARP6Q9BRS8 491 aaKnown RBP10.35□□□□□ -0.75
RFX3-202ENST00000358730 ECHDC1Q9NTX5 307 aa10.35□□□□□ -0.75
RFX3-202ENST00000358730 CAMTA1Q9Y6Y1 1673 aa10.35□□□□□ -0.75
RFX3-202ENST00000358730 RNF214Q8ND24 703 aa10.35□□□□□ -0.75
RFX3-202ENST00000358730 PDLIM2Q96JY6 352 aa10.35□□□□□ -0.75
RFX3-202ENST00000358730 RUFY3Q7L099 469 aa10.35□□□□□ -0.75
RFX3-202ENST00000358730 AACSQ86V21 672 aa10.35□□□□□ -0.75
RFX3-202ENST00000358730 LIMCH1Q9UPQ0 1083 aa10.35□□□□□ -0.75
RFX3-202ENST00000358730 HDAC5Q9UQL6 1122 aa10.35□□□□□ -0.75
RFX3-202ENST00000358730 HEG1Q9ULI3 1381 aa10.34□□□□□ -0.75
RFX3-202ENST00000358730 GRM8O00222 908 aa10.34□□□□□ -0.75
RFX3-202ENST00000358730 GADD45BO75293 160 aaPredicted RBP10.34□□□□□ -0.75
RFX3-202ENST00000358730 CPA1P15085 419 aa10.34□□□□□ -0.75
RFX3-202ENST00000358730 HYPKQ9NX55 129 aa10.34□□□□□ -0.75
RFX3-202ENST00000358730 ZSCAN21Q9Y5A6 473 aaPredicted RBP10.34□□□□□ -0.75
RFX3-202ENST00000358730 RGPD5Q99666 1765 aa10.34□□□□□ -0.75
RFX3-202ENST00000358730 PHF14O94880 888 aa10.34□□□□□ -0.75
RFX3-202ENST00000358730 AIMP1Q12904 312 aaKnown RBP10.34□□□□□ -0.75
RFX3-202ENST00000358730 HS1BP3Q53T59 392 aa10.34□□□□□ -0.75
RFX3-202ENST00000358730 USP48Q86UV5 1035 aa10.34□□□□□ -0.75
RFX3-202ENST00000358730 LINS1Q8NG48 757 aa10.34□□□□□ -0.75
RFX3-202ENST00000358730 DDX58O95786 925 aaKnown RBP10.33□□□□□ -0.76
RFX3-202ENST00000358730 PTH1RQ03431 593 aa10.33□□□□□ -0.76
RFX3-202ENST00000358730 PRPF40BQ6NWY9 871 aaKnown RBP10.33□□□□□ -0.76
RFX3-202ENST00000358730 SUCLG2Q96I99 432 aa10.33□□□□□ -0.76
RFX3-202ENST00000358730 JAKMIP1Q96N16 626 aaKnown RBP10.33□□□□□ -0.76
RFX3-202ENST00000358730 TSPY26PQ9H489 355 aa10.33□□□□□ -0.76
RFX3-202ENST00000358730 BICC1Q9H694 974 aaKnown RBP10.33□□□□□ -0.76
RFX3-202ENST00000358730 SMC3Q9UQE7 1217 aa10.33□□□□□ -0.76
RFX3-202ENST00000358730 ZSCAN22P10073 491 aaPredicted RBP10.33□□□□□ -0.76
RFX3-202ENST00000358730 AXIN2Q9Y2T1 843 aa10.33□□□□□ -0.76
RFX3-202ENST00000358730 TRPM3Q9HCF6 1732 aaPredicted RBP10.33□□□□□ -0.76
RFX3-202ENST00000358730 STX6O43752 255 aa10.32□□□□□ -0.76
RFX3-202ENST00000358730 EVI5LQ96CN4 794 aa10.32□□□□□ -0.76
RFX3-202ENST00000358730 CNPY2Q9Y2B0 182 aa10.32□□□□□ -0.76
RFX3-202ENST00000358730 LARGE1O95461 756 aa10.32□□□□□ -0.76
RFX3-202ENST00000358730 SYT1P21579 422 aa10.32□□□□□ -0.76
RFX3-202ENST00000358730 ADCK5Q3MIX3 580 aa10.32□□□□□ -0.76
RFX3-202ENST00000358730 DDX21Q9NR30 783 aaKnown RBP eCLIP10.32□□□□□ -0.76
RFX3-202ENST00000358730 C5P01031 1676 aa10.32□□□□□ -0.76
RFX3-202ENST00000358730 ADAMTS7Q9UKP4 1686 aa10.32□□□□□ -0.76
RFX3-202ENST00000358730 CCDC171Q6TFL3 1326 aa10.32□□□□□ -0.76
RFX3-202ENST00000358730 KCNJ4P48050 445 aa10.32□□□□□ -0.76
RFX3-202ENST00000358730 TPRNQ4KMQ1 711 aa10.32□□□□□ -0.76
RFX3-202ENST00000358730 CCDC83Q8IWF9 413 aa10.32□□□□□ -0.76
RFX3-202ENST00000358730 TMEM87AQ8NBN3 555 aa10.32□□□□□ -0.76
RFX3-202ENST00000358730 PDRG1Q9NUG6 133 aa10.32□□□□□ -0.76
RFX3-202ENST00000358730 NOL7Q9UMY1 257 aaKnown RBP10.32□□□□□ -0.76
RFX3-202ENST00000358730 NPHP4O75161 1426 aaPredicted RBP10.32□□□□□ -0.76
RFX3-202ENST00000358730 G3BP1Q13283 466 aaKnown RBP eCLIP10.31□□□□□ -0.76
RFX3-202ENST00000358730 VPS53Q5VIR6 699 aa10.31□□□□□ -0.76
RFX3-202ENST00000358730 RIC3Q7Z5B4 369 aa10.31□□□□□ -0.76
RFX3-202ENST00000358730 KAZALD1Q96I82 304 aa10.31□□□□□ -0.76
RFX3-202ENST00000358730 SIL1Q9H173 461 aa10.31□□□□□ -0.76
RFX3-202ENST00000358730 CYP46A1Q9Y6A2 500 aa10.31□□□□□ -0.76
RFX3-202ENST00000358730 ERBB3P21860 1342 aa10.31□□□□□ -0.76
RFX3-202ENST00000358730 SASH1O94885 1247 aa10.31□□□□□ -0.76
RFX3-202ENST00000358730 F13A1P00488 732 aa10.31□□□□□ -0.76
RFX3-202ENST00000358730 ZKSCAN1P17029 563 aaPredicted RBP10.31□□□□□ -0.76
RFX3-202ENST00000358730 EAF2Q96CJ1 260 aaPredicted RBP10.31□□□□□ -0.76
RFX3-202ENST00000358730 FAM227BQ96M60 508 aa10.31□□□□□ -0.76
RFX3-202ENST00000358730 CCDC8Q9H0W5 538 aaPredicted RBP10.31□□□□□ -0.76
RFX3-202ENST00000358730 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP10.31□□□□□ -0.76
RFX3-202ENST00000358730 LMTK3Q96Q04 1460 aa10.31□□□□□ -0.76
RFX3-202ENST00000358730 UTYO14607 1347 aa10.31□□□□□ -0.76
RFX3-202ENST00000358730 FIBPO43427 364 aa10.3□□□□□ -0.76
RFX3-202ENST00000358730 MYL6BP14649 208 aa10.3□□□□□ -0.76
RFX3-202ENST00000358730 TRHP20396 242 aaPredicted RBP10.3□□□□□ -0.76
RFX3-202ENST00000358730 GJB2P29033 226 aa10.3□□□□□ -0.76
RFX3-202ENST00000358730 SLC39A6Q13433 755 aa10.3□□□□□ -0.76
RFX3-202ENST00000358730 PDZRN4Q6ZMN7 1036 aaPredicted RBP10.3□□□□□ -0.76
RFX3-202ENST00000358730 DDX54Q8TDD1 881 aaKnown RBP10.3□□□□□ -0.76
RFX3-202ENST00000358730 TLR7Q9NYK1 1049 aaKnown RBP10.3□□□□□ -0.76
RFX3-202ENST00000358730 RBM8AQ9Y5S9 174 aaKnown RBP10.3□□□□□ -0.76
RFX3-202ENST00000358730 SCN11AQ9UI33 1791 aa10.3□□□□□ -0.76
RFX3-202ENST00000358730 ZC3H6P61129 1189 aaKnown RBP10.3□□□□□ -0.76
RFX3-202ENST00000358730 NMIQ13287 307 aaPredicted RBP10.3□□□□□ -0.76
RFX3-202ENST00000358730 PDIA6Q15084 440 aa10.3□□□□□ -0.76
RFX3-202ENST00000358730 KRT28Q7Z3Y7 464 aa10.3□□□□□ -0.76
RFX3-202ENST00000358730 ZSWIM6Q9HCJ5 1215 aa10.3□□□□□ -0.76
RFX3-202ENST00000358730 SH2B1Q9NRF2 756 aaPredicted RBP10.3□□□□□ -0.76
RFX3-202ENST00000358730 ATP6V1DQ9Y5K8 247 aa10.3□□□□□ -0.76
RFX3-202ENST00000358730 KIF1AQ12756 1690 aa10.3□□□□□ -0.76
RFX3-202ENST00000358730 HIP1O00291 1037 aa10.29□□□□□ -0.76
RFX3-202ENST00000358730 DTNBO60941 627 aa10.29□□□□□ -0.76
RFX3-202ENST00000358730 IGKV5-2P06315 115 aa10.29□□□□□ -0.76
RFX3-202ENST00000358730 NEXNQ0ZGT2 675 aa10.29□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms