RNA–Protein interactions for RNA: ENST00000356800.6

SMARCD3-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3, humanhuman

TSL 1 (best) BASIC

Gene SMARCD3, Length 1,669 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD3-202ENST00000356800 PLBD2Q8NHP8 589 aa22.86■■□□□ 1.25
SMARCD3-202ENST00000356800 AFDNP55196 1824 aaKnown RBP22.85■■□□□ 1.25
SMARCD3-202ENST00000356800 CRKLP46109 303 aaKnown RBP22.85■■□□□ 1.25
SMARCD3-202ENST00000356800 METTL22Q9BUU2 404 aaPredicted RBP22.85■■□□□ 1.25
SMARCD3-202ENST00000356800 USP44Q9H0E7 712 aa22.85■■□□□ 1.25
SMARCD3-202ENST00000356800 CCDC87Q9NVE4 849 aa22.85■■□□□ 1.25
SMARCD3-202ENST00000356800 LINC00116Q8NCU8 138 aa22.84■■□□□ 1.25
SMARCD3-202ENST00000356800 TRIM37O94972 964 aa22.84■■□□□ 1.25
SMARCD3-202ENST00000356800 IGKV5-2P06315 115 aa22.84■■□□□ 1.25
SMARCD3-202ENST00000356800 CWF19L2Q2TBE0 894 aaKnown RBP22.84■■□□□ 1.25
SMARCD3-202ENST00000356800 LINS1Q8NG48 757 aa22.84■■□□□ 1.25
SMARCD3-202ENST00000356800 ZNF330Q9Y3S2 320 aaPredicted RBP22.84■■□□□ 1.25
SMARCD3-202ENST00000356800 ALDH1L1O75891 902 aa22.83■■□□□ 1.24
SMARCD3-202ENST00000356800 IL6STP40189 918 aaPredicted RBP22.82■■□□□ 1.24
SMARCD3-202ENST00000356800 MYD88Q99836 296 aa22.82■■□□□ 1.24
SMARCD3-202ENST00000356800 HDAC1Q13547 482 aaPredicted RBP22.81■■□□□ 1.24
SMARCD3-202ENST00000356800 SIRT2Q8IXJ6 389 aa22.81■■□□□ 1.24
SMARCD3-202ENST00000356800 ZBTB3Q9H5J0 574 aa22.81■■□□□ 1.24
SMARCD3-202ENST00000356800 GNAI3P08754 354 aa22.81■■□□□ 1.24
SMARCD3-202ENST00000356800 EIF5P55010 431 aaKnown RBP22.81■■□□□ 1.24
SMARCD3-202ENST00000356800 CCNL1Q9UK58 526 aaPredicted RBP22.81■■□□□ 1.24
SMARCD3-202ENST00000356800 NEURL1BA8MQ27 555 aa22.8■■□□□ 1.24
SMARCD3-202ENST00000356800 RWDD1Q9H446 243 aaPredicted RBP22.8■■□□□ 1.24
SMARCD3-202ENST00000356800 IBTKQ9P2D0 1353 aaPredicted RBP22.79■■□□□ 1.24
SMARCD3-202ENST00000356800 NBPF7P0C2Y1 421 aaPredicted RBP22.79■■□□□ 1.24
SMARCD3-202ENST00000356800 NEXNQ0ZGT2 675 aa22.79■■□□□ 1.24
SMARCD3-202ENST00000356800 NUP98P52948 1817 aa22.79■■□□□ 1.24
SMARCD3-202ENST00000356800 MAP3K15Q6ZN16 1313 aa22.78■■□□□ 1.24
SMARCD3-202ENST00000356800 CNTNAP4Q9C0A0 1308 aa22.78■■□□□ 1.24
SMARCD3-202ENST00000356800 GNAI2P04899 355 aa22.77■■□□□ 1.24
SMARCD3-202ENST00000356800 CEP85Q6P2H3 762 aa22.77■■□□□ 1.24
SMARCD3-202ENST00000356800 KIF6Q6ZMV9 814 aa22.77■■□□□ 1.24
SMARCD3-202ENST00000356800 ANKRD36CQ5JPF3 1778 aa22.77■■□□□ 1.24
SMARCD3-202ENST00000356800 ATP5J2-PTCD1G3V325 749 aa22.77■■□□□ 1.24
SMARCD3-202ENST00000356800 UBTFL1P0CB47 393 aaPredicted RBP22.77■■□□□ 1.24
SMARCD3-202ENST00000356800 ANKRD44Q8N8A2 993 aa22.77■■□□□ 1.24
SMARCD3-202ENST00000356800 TNS1Q9HBL0 1735 aaKnown RBP22.76■■□□□ 1.23
SMARCD3-202ENST00000356800 GCKRQ14397 625 aa22.76■■□□□ 1.23
SMARCD3-202ENST00000356800 ILDR1Q86SU0 546 aaPredicted RBP22.76■■□□□ 1.23
SMARCD3-202ENST00000356800 LRRC4BQ9NT99 713 aa22.76■■□□□ 1.23
SMARCD3-202ENST00000356800 LRRFIP2Q9Y608 721 aaKnown RBP22.76■■□□□ 1.23
SMARCD3-202ENST00000356800 C4BP0C0L5 1744 aa22.76■■□□□ 1.23
SMARCD3-202ENST00000356800 UTYO14607 1347 aa22.76■■□□□ 1.23
SMARCD3-202ENST00000356800 GRM8O00222 908 aa22.74■■□□□ 1.23
SMARCD3-202ENST00000356800 HLFQ16534 295 aa22.74■■□□□ 1.23
SMARCD3-202ENST00000356800 RC3H1Q5TC82 1133 aaKnown RBP22.74■■□□□ 1.23
SMARCD3-202ENST00000356800 DZIP3Q86Y13 1208 aaKnown RBP22.74■■□□□ 1.23
SMARCD3-202ENST00000356800 RPAP2Q8IXW5 612 aaPredicted RBP22.74■■□□□ 1.23
SMARCD3-202ENST00000356800 ARXQ96QS3 562 aa22.74■■□□□ 1.23
SMARCD3-202ENST00000356800 C9orf78Q9NZ63 289 aaPredicted RBP22.74■■□□□ 1.23
SMARCD3-202ENST00000356800 TBC1D2BQ9UPU7 963 aa22.74■■□□□ 1.23
SMARCD3-202ENST00000356800 BCORQ6W2J9 1755 aa22.73■■□□□ 1.23
SMARCD3-202ENST00000356800 TCIRG1Q13488 830 aa22.73■■□□□ 1.23
SMARCD3-202ENST00000356800 GIGYF2Q6Y7W6 1299 aaKnown RBP22.73■■□□□ 1.23
SMARCD3-202ENST00000356800 SKAP1Q86WV1 359 aa22.73■■□□□ 1.23
SMARCD3-202ENST00000356800 ISCA1Q9BUE6 129 aa22.73■■□□□ 1.23
SMARCD3-202ENST00000356800 COL15A1P39059 1388 aa22.73■■□□□ 1.23
SMARCD3-202ENST00000356800 ERVV-1B6SEH8 477 aa22.72■■□□□ 1.23
SMARCD3-202ENST00000356800 SMC5Q8IY18 1101 aa22.71■■□□□ 1.23
SMARCD3-202ENST00000356800 NPM2Q86SE8 214 aaKnown RBP22.71■■□□□ 1.23
SMARCD3-202ENST00000356800 CAMTA2O94983 1202 aa22.7■■□□□ 1.22
SMARCD3-202ENST00000356800 SLC27A3Q5K4L6 730 aa22.7■■□□□ 1.22
SMARCD3-202ENST00000356800 SMIM5Q71RC9 77 aa22.7■■□□□ 1.22
SMARCD3-202ENST00000356800 PROM2Q8N271 834 aa22.7■■□□□ 1.22
SMARCD3-202ENST00000356800 KAZALD1Q96I82 304 aa22.7■■□□□ 1.22
SMARCD3-202ENST00000356800 RPS6KA4O75676 772 aa22.69■■□□□ 1.22
SMARCD3-202ENST00000356800 ATP8B2P98198 1209 aa22.69■■□□□ 1.22
SMARCD3-202ENST00000356800 TRIM28Q13263 835 aaKnown RBP22.69■■□□□ 1.22
SMARCD3-202ENST00000356800 CCDC191Q8NCU4 936 aa22.69■■□□□ 1.22
SMARCD3-202ENST00000356800 JARID2Q92833 1246 aaPredicted RBP22.69■■□□□ 1.22
SMARCD3-202ENST00000356800 SUCLG2Q96I99 432 aa22.69■■□□□ 1.22
SMARCD3-202ENST00000356800 CWC25Q9NXE8 425 aaPredicted RBP22.69■■□□□ 1.22
SMARCD3-202ENST00000356800 PNMA6EA0A0J9YXQ4 647 aa22.68■■□□□ 1.22
SMARCD3-202ENST00000356800 CASP7P55210 303 aa22.68■■□□□ 1.22
SMARCD3-202ENST00000356800 AMIGO3Q86WK7 504 aa22.68■■□□□ 1.22
SMARCD3-202ENST00000356800 UBR3Q6ZT12 1888 aa22.68■■□□□ 1.22
SMARCD3-202ENST00000356800 A0A087WZG4 1122 aa22.68■■□□□ 1.22
SMARCD3-202ENST00000356800 PLSCR1O15162 318 aa22.68■■□□□ 1.22
SMARCD3-202ENST00000356800 GNPATO15228 680 aa22.68■■□□□ 1.22
SMARCD3-202ENST00000356800 APBA3O96018 575 aa22.68■■□□□ 1.22
SMARCD3-202ENST00000356800 SCN7AQ01118 1682 aa22.67■■□□□ 1.22
SMARCD3-202ENST00000356800 H7C1W4 665 aa22.67■■□□□ 1.22
SMARCD3-202ENST00000356800 TXNRD1Q16881 649 aa22.67■■□□□ 1.22
SMARCD3-202ENST00000356800 UBE3BQ7Z3V4 1068 aa22.67■■□□□ 1.22
SMARCD3-202ENST00000356800 C4AP0C0L4 1744 aa22.67■■□□□ 1.22
SMARCD3-202ENST00000356800 RGPD3A6NKT7 1758 aaPredicted RBP22.66■■□□□ 1.22
SMARCD3-202ENST00000356800 RGPD4Q7Z3J3 1758 aa22.66■■□□□ 1.22
SMARCD3-202ENST00000356800 HSP90AB3PQ58FF7 597 aa22.66■■□□□ 1.22
SMARCD3-202ENST00000356800 DCTPP1Q9H773 170 aa22.66■■□□□ 1.22
SMARCD3-202ENST00000356800 PDZRN3Q9UPQ7 1066 aa22.66■■□□□ 1.22
SMARCD3-202ENST00000356800 GPTP24298 496 aa22.65■■□□□ 1.22
SMARCD3-202ENST00000356800 HMMRO75330 724 aa22.65■■□□□ 1.22
SMARCD3-202ENST00000356800 PPP1R42Q7Z4L9 355 aa22.65■■□□□ 1.22
SMARCD3-202ENST00000356800 NLRP10Q86W26 655 aa22.65■■□□□ 1.22
SMARCD3-202ENST00000356800 ZNF34Q8IZ26 560 aa22.65■■□□□ 1.22
SMARCD3-202ENST00000356800 GCC1Q96CN9 775 aa22.65■■□□□ 1.22
SMARCD3-202ENST00000356800 BICC1Q9H694 974 aaKnown RBP22.65■■□□□ 1.22
SMARCD3-202ENST00000356800 HDAC5Q9UQL6 1122 aa22.65■■□□□ 1.22
SMARCD3-202ENST00000356800 MTX1Q13505 466 aa22.64■■□□□ 1.21
SMARCD3-202ENST00000356800 POLA2Q14181 598 aa22.64■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms