RNA–Protein interactions for RNA: ENST00000356654.8

ATN1-201, Transcript of atrophin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATN1, Length 4,351 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATN1-201ENST00000356654 ZNF790Q6PG37 636 aa16.57■□□□□ 0.24
ATN1-201ENST00000356654 NAPBQ9H115 298 aa16.57■□□□□ 0.24
ATN1-201ENST00000356654 CAVIN4Q5BKX8 364 aa16.56■□□□□ 0.24
ATN1-201ENST00000356654 CCAR2Q8N163 923 aaKnown RBP16.56■□□□□ 0.24
ATN1-201ENST00000356654 ESYT1Q9BSJ8 1104 aa16.56■□□□□ 0.24
ATN1-201ENST00000356654 TNMDQ9H2S6 317 aa16.56■□□□□ 0.24
ATN1-201ENST00000356654 MAP3K12Q12852 859 aa16.56■□□□□ 0.24
ATN1-201ENST00000356654 DDB1Q16531 1140 aa16.56■□□□□ 0.24
ATN1-201ENST00000356654 BTG4Q9NY30 223 aa16.56■□□□□ 0.24
ATN1-201ENST00000356654 LETM1O95202 739 aaPredicted RBP16.56■□□□□ 0.24
ATN1-201ENST00000356654 CCT2P78371 535 aaKnown RBP16.56■□□□□ 0.24
ATN1-201ENST00000356654 ANKRD20A12PQ8NF67 263 aa16.55■□□□□ 0.24
ATN1-201ENST00000356654 IL17REQ8NFR9 667 aa16.55■□□□□ 0.24
ATN1-201ENST00000356654 KDM2BQ8NHM5 1336 aa16.55■□□□□ 0.24
ATN1-201ENST00000356654 SYCE3A1L190 88 aa16.55■□□□□ 0.24
ATN1-201ENST00000356654 SLC5A1P13866 664 aa16.55■□□□□ 0.24
ATN1-201ENST00000356654 ZNF213O14771 459 aa16.54■□□□□ 0.24
ATN1-201ENST00000356654 NAT10Q9H0A0 1025 aaKnown RBP16.54■□□□□ 0.24
ATN1-201ENST00000356654 ANKIB1Q9P2G1 1089 aa16.54■□□□□ 0.24
ATN1-201ENST00000356654 KDM5DQ9BY66 1539 aa16.54■□□□□ 0.24
ATN1-201ENST00000356654 ATP6V1AP38606 617 aa16.54■□□□□ 0.24
ATN1-201ENST00000356654 OLFM4Q6UX06 510 aa16.54■□□□□ 0.24
ATN1-201ENST00000356654 HOMER1Q86YM7 354 aa16.54■□□□□ 0.24
ATN1-201ENST00000356654 SPC24Q8NBT2 197 aa16.54■□□□□ 0.24
ATN1-201ENST00000356654 C8orf37Q96NL8 207 aa16.54■□□□□ 0.24
ATN1-201ENST00000356654 BCL11BQ9C0K0 894 aaPredicted RBP16.54■□□□□ 0.24
ATN1-201ENST00000356654 USP19O94966 1318 aa16.54■□□□□ 0.24
ATN1-201ENST00000356654 PRR36Q9H6K5 1346 aa16.54■□□□□ 0.24
ATN1-201ENST00000356654 KCNQ3O43525 872 aa16.54■□□□□ 0.24
ATN1-201ENST00000356654 RBM5P52756 815 aaKnown RBP eCLIP16.54■□□□□ 0.24
ATN1-201ENST00000356654 PLEKHF1Q96S99 279 aa16.54■□□□□ 0.24
ATN1-201ENST00000356654 SH2B1Q9NRF2 756 aaPredicted RBP16.54■□□□□ 0.24
ATN1-201ENST00000356654 ROBO2Q9HCK4 1378 aa16.53■□□□□ 0.24
ATN1-201ENST00000356654 TOM1O60784 492 aa16.53■□□□□ 0.24
ATN1-201ENST00000356654 CCDC192P0DO97 292 aa16.53■□□□□ 0.24
ATN1-201ENST00000356654 TMX3Q96JJ7 454 aa16.53■□□□□ 0.24
ATN1-201ENST00000356654 IQSEC3Q9UPP2 1182 aaPredicted RBP16.53■□□□□ 0.24
ATN1-201ENST00000356654 JMYQ8N9B5 988 aa16.53■□□□□ 0.24
ATN1-201ENST00000356654 CFAP45Q9UL16 551 aa16.53■□□□□ 0.24
ATN1-201ENST00000356654 INSRP06213 1382 aa16.52■□□□□ 0.24
ATN1-201ENST00000356654 NBPF7P0C2Y1 421 aaPredicted RBP16.52■□□□□ 0.24
ATN1-201ENST00000356654 RAB11FIP4Q86YS3 637 aa16.52■□□□□ 0.24
ATN1-201ENST00000356654 KLHDC4Q8TBB5 520 aa16.52■□□□□ 0.24
ATN1-201ENST00000356654 TFIP11Q9UBB9 837 aaKnown RBP16.52■□□□□ 0.24
ATN1-201ENST00000356654 TCEAL9Q9UHQ7 104 aa16.52■□□□□ 0.24
ATN1-201ENST00000356654 CDC42BPAQ5VT25 1732 aa16.52■□□□□ 0.24
ATN1-201ENST00000356654 TPM2P07951 284 aa16.52■□□□□ 0.24
ATN1-201ENST00000356654 PDE4CQ08493 712 aa16.52■□□□□ 0.24
ATN1-201ENST00000356654 LRRC2Q9BYS8 371 aa16.52■□□□□ 0.24
ATN1-201ENST00000356654 BICC1Q9H694 974 aaKnown RBP16.52■□□□□ 0.24
ATN1-201ENST00000356654 NCBP3Q53F19 620 aaKnown RBP16.52■□□□□ 0.23
ATN1-201ENST00000356654 NECAB1Q8N987 351 aa16.52■□□□□ 0.23
ATN1-201ENST00000356654 SOS1Q07889 1333 aaPredicted RBP16.52■□□□□ 0.23
ATN1-201ENST00000356654 PNMA6EA0A0J9YXQ4 647 aa16.51■□□□□ 0.23
ATN1-201ENST00000356654 CDKL5O76039 1030 aa16.51■□□□□ 0.23
ATN1-201ENST00000356654 CAMK4Q16566 473 aa16.51■□□□□ 0.23
ATN1-201ENST00000356654 ZNF496Q96IT1 587 aaPredicted RBP16.51■□□□□ 0.23
ATN1-201ENST00000356654 ZSCAN29Q8IWY8 852 aaPredicted RBP16.51■□□□□ 0.23
ATN1-201ENST00000356654 A1BGP04217 495 aa16.51■□□□□ 0.23
ATN1-201ENST00000356654 HELBQ8NG08 1087 aaPredicted RBP16.51■□□□□ 0.23
ATN1-201ENST00000356654 SLAIN2Q9P270 581 aa16.51■□□□□ 0.23
ATN1-201ENST00000356654 RBM8AQ9Y5S9 174 aaKnown RBP16.51■□□□□ 0.23
ATN1-201ENST00000356654 SF3B2Q13435 895 aaKnown RBP16.5■□□□□ 0.23
ATN1-201ENST00000356654 ATP2B3Q16720 1220 aa16.5■□□□□ 0.23
ATN1-201ENST00000356654 CCDC39Q9UFE4 941 aa16.5■□□□□ 0.23
ATN1-201ENST00000356654 MYOM2P54296 1465 aa16.5■□□□□ 0.23
ATN1-201ENST00000356654 PDILTQ8N807 584 aa16.5■□□□□ 0.23
ATN1-201ENST00000356654 NEK1Q96PY6 1258 aa16.5■□□□□ 0.23
ATN1-201ENST00000356654 NUP62CLQ9H1M0 184 aa16.5■□□□□ 0.23
ATN1-201ENST00000356654 SMC2O95347 1197 aa16.5■□□□□ 0.23
ATN1-201ENST00000356654 BAG4O95429 457 aaKnown RBP16.5■□□□□ 0.23
ATN1-201ENST00000356654 TRMT2AQ8IZ69 625 aaKnown RBP16.5■□□□□ 0.23
ATN1-201ENST00000356654 RANBP6O60518 1105 aaKnown RBP16.49■□□□□ 0.23
ATN1-201ENST00000356654 IL15P40933 162 aaPredicted RBP16.49■□□□□ 0.23
ATN1-201ENST00000356654 GJB2P29033 226 aa16.49■□□□□ 0.23
ATN1-201ENST00000356654 EIF4A1P60842 406 aaKnown RBP16.49■□□□□ 0.23
ATN1-201ENST00000356654 CDC5LQ99459 802 aaKnown RBP16.49■□□□□ 0.23
ATN1-201ENST00000356654 ZNF521Q96K83 1311 aa16.49■□□□□ 0.23
ATN1-201ENST00000356654 USP5P45974 858 aa16.49■□□□□ 0.23
ATN1-201ENST00000356654 DZIP3Q86Y13 1208 aaKnown RBP16.49■□□□□ 0.23
ATN1-201ENST00000356654 BRF1Q92994 677 aa16.49■□□□□ 0.23
ATN1-201ENST00000356654 FAM89AQ96GI7 184 aa16.49■□□□□ 0.23
ATN1-201ENST00000356654 NIP7Q9Y221 180 aaKnown RBP eCLIP16.49■□□□□ 0.23
ATN1-201ENST00000356654 HMGB1P09429 215 aaKnown RBP16.48■□□□□ 0.23
ATN1-201ENST00000356654 TFCP2Q12800 502 aa16.48■□□□□ 0.23
ATN1-201ENST00000356654 DZIP1Q86YF9 867 aaKnown RBP16.48■□□□□ 0.23
ATN1-201ENST00000356654 EFCAB6Q5THR3 1501 aa16.48■□□□□ 0.23
ATN1-201ENST00000356654 IPO7O95373 1038 aaKnown RBP16.48■□□□□ 0.23
ATN1-201ENST00000356654 CCDC173Q0VFZ6 552 aa16.48■□□□□ 0.23
ATN1-201ENST00000356654 ANO8Q9HCE9 1232 aaPredicted RBP16.48■□□□□ 0.23
ATN1-201ENST00000356654 ZNF219Q9P2Y4 722 aaPredicted RBP16.48■□□□□ 0.23
ATN1-201ENST00000356654 IFIT3O14879 490 aaKnown RBP16.48■□□□□ 0.23
ATN1-201ENST00000356654 R3HCC1Q9Y3T6 440 aaKnown RBP16.48■□□□□ 0.23
ATN1-201ENST00000356654 STX6O43752 255 aa16.47■□□□□ 0.23
ATN1-201ENST00000356654 CHMLP26374 656 aa16.47■□□□□ 0.23
ATN1-201ENST00000356654 C8orf76Q96K31 380 aa16.47■□□□□ 0.23
ATN1-201ENST00000356654 BABAM1Q9NWV8 329 aa16.47■□□□□ 0.23
ATN1-201ENST00000356654 GOLGA8BA8MQT2 603 aa16.47■□□□□ 0.23
ATN1-201ENST00000356654 TIMM10P62072 90 aa16.47■□□□□ 0.23
ATN1-201ENST00000356654 NMIQ13287 307 aaPredicted RBP16.47■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms