RNA–Protein interactions for RNA: ENST00000356316.7

CAPN3-204, Transcript of calpain 3, humanhuman

TSL 5 BASIC

Gene CAPN3, Length 1,291 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-204ENST00000356316 CAMTA2O94983 1202 aa14.1□□□□□ -0.15
CAPN3-204ENST00000356316 PIP4K2AP48426 406 aaPredicted RBP14.1□□□□□ -0.15
CAPN3-204ENST00000356316 PRR5LQ6MZQ0 368 aa14.1□□□□□ -0.15
CAPN3-204ENST00000356316 CLEC4GQ6UXB4 293 aa14.1□□□□□ -0.15
CAPN3-204ENST00000356316 CCDC24Q8N4L8 307 aa14.1□□□□□ -0.15
CAPN3-204ENST00000356316 RRAGCQ9HB90 399 aa14.1□□□□□ -0.15
CAPN3-204ENST00000356316 MIS18AQ9NYP9 233 aa14.1□□□□□ -0.15
CAPN3-204ENST00000356316 MAPK8IP3Q9UPT6 1336 aa14.1□□□□□ -0.15
CAPN3-204ENST00000356316 DLEC1Q9Y238 1755 aa14.09□□□□□ -0.15
CAPN3-204ENST00000356316 PRAMEF22A3QJZ6 481 aa14.09□□□□□ -0.15
CAPN3-204ENST00000356316 APLP1P51693 650 aa14.09□□□□□ -0.15
CAPN3-204ENST00000356316 NBPF5PQ86XG9 351 aaPredicted RBP14.09□□□□□ -0.15
CAPN3-204ENST00000356316 ZC3H4Q9UPT8 1303 aaKnown RBP14.09□□□□□ -0.15
CAPN3-204ENST00000356316 SCN7AQ01118 1682 aa14.08□□□□□ -0.16
CAPN3-204ENST00000356316 DSG3P32926 999 aa14.08□□□□□ -0.16
CAPN3-204ENST00000356316 RASSF7Q02833 373 aa14.08□□□□□ -0.16
CAPN3-204ENST00000356316 TPTE2Q6XPS3 522 aa14.08□□□□□ -0.16
CAPN3-204ENST00000356316 RBM46Q8TBY0 533 aaKnown RBP14.08□□□□□ -0.16
CAPN3-204ENST00000356316 CNKSR1Q969H4 720 aa14.08□□□□□ -0.16
CAPN3-204ENST00000356316 C21orf2O43822 256 aa14.07□□□□□ -0.16
CAPN3-204ENST00000356316 GTF2E1P29083 439 aaPredicted RBP14.07□□□□□ -0.16
CAPN3-204ENST00000356316 NFE2L2Q16236 605 aa14.07□□□□□ -0.16
CAPN3-204ENST00000356316 DPY19L2Q6NUT2 758 aa14.07□□□□□ -0.16
CAPN3-204ENST00000356316 CCDC88AQ3V6T2 1871 aa14.07□□□□□ -0.16
CAPN3-204ENST00000356316 DLG5Q8TDM6 1919 aa14.06□□□□□ -0.16
CAPN3-204ENST00000356316 FSTL1Q12841 308 aa14.06□□□□□ -0.16
CAPN3-204ENST00000356316 RALBP1Q15311 655 aa14.06□□□□□ -0.16
CAPN3-204ENST00000356316 STYK1Q6J9G0 422 aa14.06□□□□□ -0.16
CAPN3-204ENST00000356316 MASTLQ96GX5 879 aa14.06□□□□□ -0.16
CAPN3-204ENST00000356316 PLEKHF1Q96S99 279 aa14.06□□□□□ -0.16
CAPN3-204ENST00000356316 NIP7Q9Y221 180 aaKnown RBP eCLIP14.06□□□□□ -0.16
CAPN3-204ENST00000356316 ANKRD31Q8N7Z5 1873 aa14.06□□□□□ -0.16
CAPN3-204ENST00000356316 GLTPD2A6NH11 291 aa14.05□□□□□ -0.16
CAPN3-204ENST00000356316 NBPF26B4DH59 902 aa14.05□□□□□ -0.16
CAPN3-204ENST00000356316 RGL2O15211 777 aa14.05□□□□□ -0.16
CAPN3-204ENST00000356316 SRGNP10124 158 aa14.05□□□□□ -0.16
CAPN3-204ENST00000356316 VEGFAP15692 232 aaPredicted RBP14.05□□□□□ -0.16
CAPN3-204ENST00000356316 SOGA3Q5TF21 947 aa14.05□□□□□ -0.16
CAPN3-204ENST00000356316 NBPF10Q6P3W6 841 aaKnown RBP14.05□□□□□ -0.16
CAPN3-204ENST00000356316 NGEFQ8N5V2 710 aa14.05□□□□□ -0.16
CAPN3-204ENST00000356316 NBPF15Q8N660 670 aa14.05□□□□□ -0.16
CAPN3-204ENST00000356316 FAM177BA6PVY3 158 aa14.04□□□□□ -0.16
CAPN3-204ENST00000356316 RRP7AQ9Y3A4 280 aaKnown RBP14.04□□□□□ -0.16
CAPN3-204ENST00000356316 TNRC6CQ9HCJ0 1690 aaKnown RBP14.04□□□□□ -0.16
CAPN3-204ENST00000356316 BCORQ6W2J9 1755 aa14.04□□□□□ -0.16
CAPN3-204ENST00000356316 NFKBIEO00221 500 aa14.03□□□□□ -0.16
CAPN3-204ENST00000356316 ERFEQ4G0M1 354 aa14.03□□□□□ -0.16
CAPN3-204ENST00000356316 KIF6Q6ZMV9 814 aa14.03□□□□□ -0.16
CAPN3-204ENST00000356316 NPR1P16066 1061 aa14.02□□□□□ -0.17
CAPN3-204ENST00000356316 RIPK4P57078 832 aa14.02□□□□□ -0.17
CAPN3-204ENST00000356316 EIF4A1P60842 406 aaKnown RBP14.02□□□□□ -0.17
CAPN3-204ENST00000356316 DDX10Q13206 875 aaKnown RBP14.02□□□□□ -0.17
CAPN3-204ENST00000356316 PRPF40BQ6NWY9 871 aaKnown RBP14.02□□□□□ -0.17
CAPN3-204ENST00000356316 SMC1BQ8NDV3 1235 aa14.02□□□□□ -0.17
CAPN3-204ENST00000356316 THUMPD2Q9BTF0 503 aaKnown RBP14.02□□□□□ -0.17
CAPN3-204ENST00000356316 NYXQ9GZU5 481 aa14.02□□□□□ -0.17
CAPN3-204ENST00000356316 TAOK3Q9H2K8 898 aa14.02□□□□□ -0.17
CAPN3-204ENST00000356316 CACNA1SQ13698 1873 aa14.01□□□□□ -0.17
CAPN3-204ENST00000356316 ERVV-1B6SEH8 477 aa14.01□□□□□ -0.17
CAPN3-204ENST00000356316 MYL6BP14649 208 aa14.01□□□□□ -0.17
CAPN3-204ENST00000356316 ALDH1B1P30837 517 aa14.01□□□□□ -0.17
CAPN3-204ENST00000356316 PRELPP51888 382 aa14.01□□□□□ -0.17
CAPN3-204ENST00000356316 LMOD3Q0VAK6 560 aa14.01□□□□□ -0.17
CAPN3-204ENST00000356316 HLFQ16534 295 aa14.01□□□□□ -0.17
CAPN3-204ENST00000356316 TSPYL4Q9UJ04 414 aa14.01□□□□□ -0.17
CAPN3-204ENST00000356316 SLX4Q8IY92 1834 aa14□□□□□ -0.17
CAPN3-204ENST00000356316 LAMB4A4D0S4 1761 aa14□□□□□ -0.17
CAPN3-204ENST00000356316 COL11A2P13942 1736 aaPredicted RBP14□□□□□ -0.17
CAPN3-204ENST00000356316 FER1L6Q2WGJ9 1857 aa13.99□□□□□ -0.17
CAPN3-204ENST00000356316 KDM3BQ7LBC6 1761 aa13.99□□□□□ -0.17
CAPN3-204ENST00000356316 TIAM2Q8IVF5 1701 aa13.99□□□□□ -0.17
CAPN3-204ENST00000356316 LTBP3Q9NS15 1303 aa13.99□□□□□ -0.17
CAPN3-204ENST00000356316 CCDC93Q567U6 631 aa13.99□□□□□ -0.17
CAPN3-204ENST00000356316 DICER1Q9UPY3 1922 aaKnown RBP13.99□□□□□ -0.17
CAPN3-204ENST00000356316 MAP3K15Q6ZN16 1313 aa13.98□□□□□ -0.17
CAPN3-204ENST00000356316 KLRG2A4D1S0 409 aaPredicted RBP13.98□□□□□ -0.17
CAPN3-204ENST00000356316 RTKN2Q8IZC4 609 aa13.98□□□□□ -0.17
CAPN3-204ENST00000356316 DNAJC5GQ8N7S2 189 aa13.98□□□□□ -0.17
CAPN3-204ENST00000356316 BABAM1Q9NWV8 329 aa13.98□□□□□ -0.17
CAPN3-204ENST00000356316 NUP98P52948 1817 aa13.97□□□□□ -0.17
CAPN3-204ENST00000356316 MYBBP1AQ9BQG0 1328 aaKnown RBP13.97□□□□□ -0.17
CAPN3-204ENST00000356316 EIF2S2P20042 333 aaKnown RBP13.97□□□□□ -0.17
CAPN3-204ENST00000356316 TMPOP42166 694 aaKnown RBP13.97□□□□□ -0.17
CAPN3-204ENST00000356316 WDR43Q15061 677 aaKnown RBP eCLIP13.97□□□□□ -0.17
CAPN3-204ENST00000356316 NEUROD2Q15784 382 aa13.97□□□□□ -0.17
CAPN3-204ENST00000356316 TTLL7Q6ZT98 887 aa13.97□□□□□ -0.17
CAPN3-204ENST00000356316 RPGRQ92834 1020 aaKnown RBP13.97□□□□□ -0.17
CAPN3-204ENST00000356316 ZBTB3Q9H5J0 574 aa13.97□□□□□ -0.17
CAPN3-204ENST00000356316 ARFGEF2Q9Y6D5 1785 aa13.96□□□□□ -0.17
CAPN3-204ENST00000356316 ERBB4Q15303 1308 aa13.96□□□□□ -0.17
CAPN3-204ENST00000356316 WDR90Q96KV7 1748 aa13.96□□□□□ -0.17
CAPN3-204ENST00000356316 ABCB7O75027 752 aa13.96□□□□□ -0.17
CAPN3-204ENST00000356316 GPTP24298 496 aa13.96□□□□□ -0.17
CAPN3-204ENST00000356316 PPP1R42Q7Z4L9 355 aa13.96□□□□□ -0.17
CAPN3-204ENST00000356316 FKBP4Q02790 459 aaKnown RBP eCLIP13.95□□□□□ -0.18
CAPN3-204ENST00000356316 NUTM1Q86Y26 1132 aa13.95□□□□□ -0.18
CAPN3-204ENST00000356316 C7orf43Q8WVR3 580 aa13.95□□□□□ -0.18
CAPN3-204ENST00000356316 TMX4Q9H1E5 349 aaPredicted RBP13.95□□□□□ -0.18
CAPN3-204ENST00000356316 DDNO94850 711 aaPredicted RBP13.94□□□□□ -0.18
CAPN3-204ENST00000356316 HTRA3P83110 453 aa13.94□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms