RNA–Protein interactions for RNA: ENST00000355765.10

PRPF39-201, Transcript of pre-mRNA processing factor 39, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRPF39, Length 2,868 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-201ENST00000355765 CLIP2Q9UDT6 1046 aa22.46■■□□□ 1.19
PRPF39-201ENST00000355765 NPHP1O15259 732 aa22.45■■□□□ 1.18
PRPF39-201ENST00000355765 HYPKQ9NX55 129 aa22.45■■□□□ 1.18
PRPF39-201ENST00000355765 NCKAP5LQ9HCH0 1330 aa22.45■■□□□ 1.18
PRPF39-201ENST00000355765 ADCK5Q3MIX3 580 aa22.44■■□□□ 1.18
PRPF39-201ENST00000355765 PLA2G4DQ86XP0 818 aa22.44■■□□□ 1.18
PRPF39-201ENST00000355765 JAKMIP1Q96N16 626 aaKnown RBP22.44■■□□□ 1.18
PRPF39-201ENST00000355765 PIK3C2BO00750 1634 aa22.44■■□□□ 1.18
PRPF39-201ENST00000355765 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP22.44■■□□□ 1.18
PRPF39-201ENST00000355765 ST3GAL1Q11201 340 aa22.44■■□□□ 1.18
PRPF39-201ENST00000355765 DNAJC25Q9H1X3 360 aa22.44■■□□□ 1.18
PRPF39-201ENST00000355765 TFIP11Q9UBB9 837 aaKnown RBP22.44■■□□□ 1.18
PRPF39-201ENST00000355765 TSPYL4Q9UJ04 414 aa22.44■■□□□ 1.18
PRPF39-201ENST00000355765 CDC37L1Q7L3B6 337 aa22.43■■□□□ 1.18
PRPF39-201ENST00000355765 ZNF397Q8NF99 534 aaPredicted RBP22.43■■□□□ 1.18
PRPF39-201ENST00000355765 PDRG1Q9NUG6 133 aa22.43■■□□□ 1.18
PRPF39-201ENST00000355765 FOXO3O43524 673 aa22.43■■□□□ 1.18
PRPF39-201ENST00000355765 ELF2Q15723 593 aa22.43■■□□□ 1.18
PRPF39-201ENST00000355765 KRT85P78386 507 aa22.42■■□□□ 1.18
PRPF39-201ENST00000355765 EIF4A2Q14240 407 aaKnown RBP22.42■■□□□ 1.18
PRPF39-201ENST00000355765 FBXO38Q6PIJ6 1188 aa22.42■■□□□ 1.18
PRPF39-201ENST00000355765 GNAI3P08754 354 aa22.42■■□□□ 1.18
PRPF39-201ENST00000355765 CCDC66A2RUB6 948 aa22.41■■□□□ 1.18
PRPF39-201ENST00000355765 GOLGA6L4A6NEF3 574 aa22.41■■□□□ 1.18
PRPF39-201ENST00000355765 LARP1BQ659C4 914 aaKnown RBP22.41■■□□□ 1.18
PRPF39-201ENST00000355765 TRERF1Q96PN7 1200 aa22.41■■□□□ 1.18
PRPF39-201ENST00000355765 TRMT1Q9NXH9 659 aaKnown RBP22.41■■□□□ 1.18
PRPF39-201ENST00000355765 ME3Q16798 604 aa22.41■■□□□ 1.18
PRPF39-201ENST00000355765 ZNF165P49910 485 aa22.4■■□□□ 1.18
PRPF39-201ENST00000355765 PRPF40BQ6NWY9 871 aaKnown RBP22.4■■□□□ 1.18
PRPF39-201ENST00000355765 PI4K2BQ8TCG2 481 aa22.4■■□□□ 1.18
PRPF39-201ENST00000355765 SURF6O75683 361 aaKnown RBP22.4■■□□□ 1.18
PRPF39-201ENST00000355765 PTH1RQ03431 593 aa22.39■■□□□ 1.18
PRPF39-201ENST00000355765 STK31Q9BXU1 1019 aa22.39■■□□□ 1.18
PRPF39-201ENST00000355765 MYO5BQ9ULV0 1848 aa22.39■■□□□ 1.17
PRPF39-201ENST00000355765 RBM6P78332 1123 aaKnown RBP22.39■■□□□ 1.17
PRPF39-201ENST00000355765 FLIIQ13045 1269 aa22.39■■□□□ 1.17
PRPF39-201ENST00000355765 TIGD1Q96MW7 591 aa22.39■■□□□ 1.17
PRPF39-201ENST00000355765 PLCD3Q8N3E9 789 aa22.38■■□□□ 1.17
PRPF39-201ENST00000355765 TDRD7Q8NHU6 1098 aaKnown RBP22.38■■□□□ 1.17
PRPF39-201ENST00000355765 SOX12O15370 315 aa22.38■■□□□ 1.17
PRPF39-201ENST00000355765 ATP7BP35670 1465 aa22.38■■□□□ 1.17
PRPF39-201ENST00000355765 COL9A3Q14050 684 aaPredicted RBP22.37■■□□□ 1.17
PRPF39-201ENST00000355765 PTPN14Q15678 1187 aa22.37■■□□□ 1.17
PRPF39-201ENST00000355765 NR1I2O75469 434 aa22.37■■□□□ 1.17
PRPF39-201ENST00000355765 EPB41L2O43491 1005 aaKnown RBP22.36■■□□□ 1.17
PRPF39-201ENST00000355765 ARHGAP30Q7Z6I6 1101 aaPredicted RBP22.36■■□□□ 1.17
PRPF39-201ENST00000355765 CNTROBQ8N137 903 aa22.36■■□□□ 1.17
PRPF39-201ENST00000355765 SPATA32Q96LK8 384 aa22.36■■□□□ 1.17
PRPF39-201ENST00000355765 EDC4Q6P2E9 1401 aaKnown RBP22.36■■□□□ 1.17
PRPF39-201ENST00000355765 AATKQ6ZMQ8 1374 aa22.36■■□□□ 1.17
PRPF39-201ENST00000355765 AOX1Q06278 1338 aa22.36■■□□□ 1.17
PRPF39-201ENST00000355765 SOS1Q07889 1333 aaPredicted RBP22.36■■□□□ 1.17
PRPF39-201ENST00000355765 LRRC8AQ8IWT6 810 aa22.36■■□□□ 1.17
PRPF39-201ENST00000355765 TCEANC2Q96MN5 208 aa22.36■■□□□ 1.17
PRPF39-201ENST00000355765 CYP46A1Q9Y6A2 500 aa22.36■■□□□ 1.17
PRPF39-201ENST00000355765 CRB1P82279 1406 aa22.36■■□□□ 1.17
PRPF39-201ENST00000355765 BICD2Q8TD16 824 aa22.35■■□□□ 1.17
PRPF39-201ENST00000355765 TPCN1Q9ULQ1 816 aa22.35■■□□□ 1.17
PRPF39-201ENST00000355765 UBTFL1P0CB47 393 aaPredicted RBP22.35■■□□□ 1.17
PRPF39-201ENST00000355765 VPS53Q5VIR6 699 aa22.35■■□□□ 1.17
PRPF39-201ENST00000355765 FILIP1Q7Z7B0 1213 aa22.35■■□□□ 1.17
PRPF39-201ENST00000355765 RHPN1Q8TCX5 695 aa22.35■■□□□ 1.17
PRPF39-201ENST00000355765 CLSTN2Q9H4D0 955 aa22.35■■□□□ 1.17
PRPF39-201ENST00000355765 SLC52A1Q9NWF4 448 aa22.35■■□□□ 1.17
PRPF39-201ENST00000355765 CPS1P31327 1500 aa22.34■■□□□ 1.17
PRPF39-201ENST00000355765 SKILP12757 684 aa22.34■■□□□ 1.17
PRPF39-201ENST00000355765 KLHL34Q8N239 644 aa22.34■■□□□ 1.17
PRPF39-201ENST00000355765 ZNF446Q9NWS9 450 aa22.34■■□□□ 1.17
PRPF39-201ENST00000355765 PREX1Q8TCU6 1659 aa22.34■■□□□ 1.17
PRPF39-201ENST00000355765 PPP1R42Q7Z4L9 355 aa22.34■■□□□ 1.17
PRPF39-201ENST00000355765 GTF3C6Q969F1 213 aa22.34■■□□□ 1.17
PRPF39-201ENST00000355765 USP44Q9H0E7 712 aa22.34■■□□□ 1.17
PRPF39-201ENST00000355765 SH2B1Q9NRF2 756 aaPredicted RBP22.34■■□□□ 1.17
PRPF39-201ENST00000355765 USP16Q9Y5T5 823 aa22.34■■□□□ 1.17
PRPF39-201ENST00000355765 A0A087WWV3 80 aa22.33■■□□□ 1.17
PRPF39-201ENST00000355765 SYTL4Q96C24 671 aaPredicted RBP22.33■■□□□ 1.17
PRPF39-201ENST00000355765 ZSCAN31Q96LW9 406 aaPredicted RBP22.33■■□□□ 1.17
PRPF39-201ENST00000355765 ERBB3P21860 1342 aa22.33■■□□□ 1.17
PRPF39-201ENST00000355765 HSP90AB2PQ58FF8 381 aa22.33■■□□□ 1.17
PRPF39-201ENST00000355765 STAG3Q9UJ98 1225 aa22.33■■□□□ 1.17
PRPF39-201ENST00000355765 DDX19AQ9NUU7 478 aaKnown RBP22.32■■□□□ 1.16
PRPF39-201ENST00000355765 CCDC171Q6TFL3 1326 aa22.32■■□□□ 1.16
PRPF39-201ENST00000355765 TTC21AQ8NDW8 1320 aa22.32■■□□□ 1.16
PRPF39-201ENST00000355765 LEO1Q8WVC0 666 aaPredicted RBP22.32■■□□□ 1.16
PRPF39-201ENST00000355765 NYAP1Q6ZVC0 841 aa22.32■■□□□ 1.16
PRPF39-201ENST00000355765 ERO1AQ96HE7 468 aa22.32■■□□□ 1.16
PRPF39-201ENST00000355765 ELP1O95163 1332 aa22.31■■□□□ 1.16
PRPF39-201ENST00000355765 GOLGA6L19H0YKK7 550 aa22.31■■□□□ 1.16
PRPF39-201ENST00000355765 CAPN2P17655 700 aa22.31■■□□□ 1.16
PRPF39-201ENST00000355765 ZSWIM6Q9HCJ5 1215 aa22.31■■□□□ 1.16
PRPF39-201ENST00000355765 FAM53CQ9NYF3 392 aa22.31■■□□□ 1.16
PRPF39-201ENST00000355765 TRHP20396 242 aaPredicted RBP22.31■■□□□ 1.16
PRPF39-201ENST00000355765 C11orf57Q6ZUT1 292 aaPredicted RBP22.31■■□□□ 1.16
PRPF39-201ENST00000355765 CCDC69A6NI79 296 aa22.3■■□□□ 1.16
PRPF39-201ENST00000355765 STK3Q13188 491 aa22.3■■□□□ 1.16
PRPF39-201ENST00000355765 LARP1Q6PKG0 1096 aaKnown RBP22.3■■□□□ 1.16
PRPF39-201ENST00000355765 PGBD1Q96JS3 809 aa22.3■■□□□ 1.16
PRPF39-201ENST00000355765 RAB11FIP3O75154 756 aa22.3■■□□□ 1.16
PRPF39-201ENST00000355765 MTHFSDQ2M296 383 aaKnown RBP22.3■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms