RNA–Protein interactions for RNA: ENST00000355628.9

FAM208A-201, Transcript of family with sequence similarity 208 member A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene FAM208A, Length 5,239 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM208A-201ENST00000355628 PTPRCP08575 1304 aa18.36■□□□□ 0.53
FAM208A-201ENST00000355628 ZSCAN12O43309 604 aa18.36■□□□□ 0.53
FAM208A-201ENST00000355628 TRIM27P14373 513 aa18.36■□□□□ 0.53
FAM208A-201ENST00000355628 CCDC181Q5TID7 509 aa18.36■□□□□ 0.53
FAM208A-201ENST00000355628 NLRP1Q9C000 1473 aa18.35■□□□□ 0.53
FAM208A-201ENST00000355628 LIMCH1Q9UPQ0 1083 aa18.35■□□□□ 0.53
FAM208A-201ENST00000355628 SFPQP23246 707 aaKnown RBP eCLIP18.35■□□□□ 0.53
FAM208A-201ENST00000355628 CALRP27797 417 aaKnown RBP18.35■□□□□ 0.53
FAM208A-201ENST00000355628 NBPF6Q5VWK0 638 aa18.35■□□□□ 0.53
FAM208A-201ENST00000355628 PPP1R42Q7Z4L9 355 aa18.35■□□□□ 0.53
FAM208A-201ENST00000355628 NBPF5PQ86XG9 351 aaPredicted RBP18.35■□□□□ 0.53
FAM208A-201ENST00000355628 NBPF4Q96M43 638 aa18.35■□□□□ 0.53
FAM208A-201ENST00000355628 BAG6P46379 1132 aa18.35■□□□□ 0.53
FAM208A-201ENST00000355628 CCDC83Q8IWF9 413 aa18.35■□□□□ 0.53
FAM208A-201ENST00000355628 KIF18AQ8NI77 898 aa18.35■□□□□ 0.53
FAM208A-201ENST00000355628 AKAP4Q5JQC9 854 aa18.34■□□□□ 0.53
FAM208A-201ENST00000355628 NUTM1Q86Y26 1132 aa18.34■□□□□ 0.53
FAM208A-201ENST00000355628 ZSCAN29Q8IWY8 852 aaPredicted RBP18.34■□□□□ 0.53
FAM208A-201ENST00000355628 CEP131Q9UPN4 1083 aa18.34■□□□□ 0.53
FAM208A-201ENST00000355628 PLEKHG1Q9ULL1 1385 aa18.34■□□□□ 0.53
FAM208A-201ENST00000355628 METTL24Q5JXM2 366 aa18.34■□□□□ 0.53
FAM208A-201ENST00000355628 DEF6Q9H4E7 631 aa18.34■□□□□ 0.53
FAM208A-201ENST00000355628 EIF2AK4Q9P2K8 1649 aaKnown RBP18.34■□□□□ 0.53
FAM208A-201ENST00000355628 TMCO3Q6UWJ1 677 aa18.34■□□□□ 0.53
FAM208A-201ENST00000355628 HMGB1P09429 215 aaKnown RBP18.34■□□□□ 0.53
FAM208A-201ENST00000355628 HDAC1Q13547 482 aaPredicted RBP18.34■□□□□ 0.53
FAM208A-201ENST00000355628 EIF4A2Q14240 407 aaKnown RBP18.34■□□□□ 0.53
FAM208A-201ENST00000355628 CGNQ9P2M7 1197 aaKnown RBP18.33■□□□□ 0.53
FAM208A-201ENST00000355628 RTCBQ9Y3I0 505 aaKnown RBP18.33■□□□□ 0.53
FAM208A-201ENST00000355628 PCDH11XQ9BZA7 1347 aa18.33■□□□□ 0.53
FAM208A-201ENST00000355628 PCDH11YQ9BZA8 1340 aa18.33■□□□□ 0.53
FAM208A-201ENST00000355628 CFAP65Q6ZU64 1925 aaKnown RBP18.33■□□□□ 0.53
FAM208A-201ENST00000355628 USP8P40818 1118 aa18.33■□□□□ 0.52
FAM208A-201ENST00000355628 SKAP1Q86WV1 359 aa18.33■□□□□ 0.52
FAM208A-201ENST00000355628 DDX19AQ9NUU7 478 aaKnown RBP18.33■□□□□ 0.52
FAM208A-201ENST00000355628 RIMBP3CA6NJZ7 1639 aa18.33■□□□□ 0.52
FAM208A-201ENST00000355628 RIMBP3BA6NNM3 1639 aa18.33■□□□□ 0.52
FAM208A-201ENST00000355628 RIMBP3Q9UFD9 1639 aa18.33■□□□□ 0.52
FAM208A-201ENST00000355628 IMMTQ16891 758 aaKnown RBP18.33■□□□□ 0.52
FAM208A-201ENST00000355628 U3KPZ7 1027 aaPredicted RBP18.33■□□□□ 0.52
FAM208A-201ENST00000355628 PZPP20742 1482 aa18.33■□□□□ 0.52
FAM208A-201ENST00000355628 KAT6BQ8WYB5 2073 aa18.32■□□□□ 0.52
FAM208A-201ENST00000355628 BAG4O95429 457 aaKnown RBP18.32■□□□□ 0.52
FAM208A-201ENST00000355628 DDX46Q7L014 1031 aaKnown RBP18.32■□□□□ 0.52
FAM208A-201ENST00000355628 MTMR7Q9Y216 660 aa18.32■□□□□ 0.52
FAM208A-201ENST00000355628 C6orf229H3BNL8 230 aa18.32■□□□□ 0.52
FAM208A-201ENST00000355628 EPB41L2O43491 1005 aaKnown RBP18.32■□□□□ 0.52
FAM208A-201ENST00000355628 IFIT5Q13325 482 aaKnown RBP18.32■□□□□ 0.52
FAM208A-201ENST00000355628 PRPF40BQ6NWY9 871 aaKnown RBP18.32■□□□□ 0.52
FAM208A-201ENST00000355628 HOXC9P31274 260 aa18.32■□□□□ 0.52
FAM208A-201ENST00000355628 TBC1D9Q6ZT07 1266 aa18.32■□□□□ 0.52
FAM208A-201ENST00000355628 CAVIN2O95810 425 aa18.31■□□□□ 0.52
FAM208A-201ENST00000355628 MAP3K19Q56UN5 1328 aa18.31■□□□□ 0.52
FAM208A-201ENST00000355628 IFIT1P09914 478 aaKnown RBP18.31■□□□□ 0.52
FAM208A-201ENST00000355628 CFAP100Q494V2 611 aa18.31■□□□□ 0.52
FAM208A-201ENST00000355628 CAVIN4Q5BKX8 364 aa18.31■□□□□ 0.52
FAM208A-201ENST00000355628 SETDB2Q96T68 719 aa18.31■□□□□ 0.52
FAM208A-201ENST00000355628 KRT18P05783 430 aaKnown RBP18.31■□□□□ 0.52
FAM208A-201ENST00000355628 SMARCA5O60264 1052 aaPredicted RBP18.31■□□□□ 0.52
FAM208A-201ENST00000355628 ZNF772Q68DY9 489 aaPredicted RBP18.31■□□□□ 0.52
FAM208A-201ENST00000355628 FAM177A1Q8N128 213 aaPredicted RBP18.31■□□□□ 0.52
FAM208A-201ENST00000355628 RAI14Q9P0K7 980 aa18.31■□□□□ 0.52
FAM208A-201ENST00000355628 POLKQ9UBT6 870 aa18.31■□□□□ 0.52
FAM208A-201ENST00000355628 SIRT1Q96EB6 747 aa18.3■□□□□ 0.52
FAM208A-201ENST00000355628 SYCP1Q15431 976 aa18.3■□□□□ 0.52
FAM208A-201ENST00000355628 CAMK4Q16566 473 aa18.3■□□□□ 0.52
FAM208A-201ENST00000355628 ARHGAP29Q52LW3 1261 aa18.3■□□□□ 0.52
FAM208A-201ENST00000355628 DCAF5Q96JK2 942 aa18.3■□□□□ 0.52
FAM208A-201ENST00000355628 SLC39A6Q13433 755 aa18.3■□□□□ 0.52
FAM208A-201ENST00000355628 IGHDP01880 384 aa18.3■□□□□ 0.52
FAM208A-201ENST00000355628 TRPC5Q9UL62 973 aaPredicted RBP18.3■□□□□ 0.52
FAM208A-201ENST00000355628 FKBP4Q02790 459 aaKnown RBP eCLIP18.29■□□□□ 0.52
FAM208A-201ENST00000355628 CCDC148Q8NFR7 591 aa18.29■□□□□ 0.52
FAM208A-201ENST00000355628 DNAAF4Q8WXU2 420 aa18.29■□□□□ 0.52
FAM208A-201ENST00000355628 DYNC1I1O14576 645 aa18.29■□□□□ 0.52
FAM208A-201ENST00000355628 ARHGAP45Q92619 1136 aa18.29■□□□□ 0.52
FAM208A-201ENST00000355628 CLASP1Q7Z460 1538 aa18.29■□□□□ 0.52
FAM208A-201ENST00000355628 A0A1W2PP64 1363 aa18.29■□□□□ 0.52
FAM208A-201ENST00000355628 GSDMDP57764 484 aa18.29■□□□□ 0.52
FAM208A-201ENST00000355628 PRIMPOLQ96LW4 560 aa18.29■□□□□ 0.52
FAM208A-201ENST00000355628 CLIP2Q9UDT6 1046 aa18.29■□□□□ 0.52
FAM208A-201ENST00000355628 ATP2B2Q01814 1243 aa18.29■□□□□ 0.52
FAM208A-201ENST00000355628 UBAC1Q9BSL1 405 aa18.29■□□□□ 0.52
FAM208A-201ENST00000355628 LRP2BPQ9P2M1 347 aa18.29■□□□□ 0.52
FAM208A-201ENST00000355628 FERMT3Q86UX7 667 aa18.28■□□□□ 0.52
FAM208A-201ENST00000355628 CDC5LQ99459 802 aaKnown RBP18.28■□□□□ 0.52
FAM208A-201ENST00000355628 GOLGA6L7A0A1B0GV03 622 aa18.28■□□□□ 0.52
FAM208A-201ENST00000355628 CLCN1P35523 988 aa18.28■□□□□ 0.52
FAM208A-201ENST00000355628 PAXIP1Q6ZW49 1069 aaPredicted RBP18.28■□□□□ 0.52
FAM208A-201ENST00000355628 PARP3Q9Y6F1 533 aa18.28■□□□□ 0.52
FAM208A-201ENST00000355628 QTRT2Q9H974 415 aaKnown RBP18.28■□□□□ 0.52
FAM208A-201ENST00000355628 ANKRD18BA2A2Z9 1011 aa18.28■□□□□ 0.52
FAM208A-201ENST00000355628 FAM83GA6ND36 823 aa18.28■□□□□ 0.52
FAM208A-201ENST00000355628 DDX11Q96FC9 970 aa18.28■□□□□ 0.52
FAM208A-201ENST00000355628 NUP133Q8WUM0 1156 aa18.27■□□□□ 0.52
FAM208A-201ENST00000355628 ABCF2Q9UG63 623 aa18.27■□□□□ 0.52
FAM208A-201ENST00000355628 CCNL1Q9UK58 526 aaPredicted RBP18.27■□□□□ 0.52
FAM208A-201ENST00000355628 MCM3P25205 808 aa18.27■□□□□ 0.52
FAM208A-201ENST00000355628 ZFYVE27Q5T4F4 411 aa18.27■□□□□ 0.52
FAM208A-201ENST00000355628 NUCB1Q02818 461 aa18.27■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 66.6 ms