RNA–Protein interactions for RNA: ENST00000355485.6

VANGL1-202, Transcript of VANGL planar cell polarity protein 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VANGL1, Length 8,691 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VANGL1-202ENST00000355485 OTUD6BQ8N6M0 293 aa9.07□□□□□ -0.96
VANGL1-202ENST00000355485 BANK1Q8NDB2 785 aa9.07□□□□□ -0.96
VANGL1-202ENST00000355485 NEK11Q8NG66 645 aa9.07□□□□□ -0.96
VANGL1-202ENST00000355485 DDX19AQ9NUU7 478 aaKnown RBP9.07□□□□□ -0.96
VANGL1-202ENST00000355485 ZEB2O60315 1214 aa9.07□□□□□ -0.96
VANGL1-202ENST00000355485 POLR3DP05423 398 aaPredicted RBP9.07□□□□□ -0.96
VANGL1-202ENST00000355485 ZSCAN22P10073 491 aaPredicted RBP9.07□□□□□ -0.96
VANGL1-202ENST00000355485 LRPPRCP42704 1394 aaKnown RBP9.06□□□□□ -0.96
VANGL1-202ENST00000355485 FRMD3A2A2Y4 597 aa9.06□□□□□ -0.96
VANGL1-202ENST00000355485 BIRC2Q13490 618 aa9.06□□□□□ -0.96
VANGL1-202ENST00000355485 HSPA4P34932 840 aa9.06□□□□□ -0.96
VANGL1-202ENST00000355485 PRXQ9BXM0 1461 aa9.06□□□□□ -0.96
VANGL1-202ENST00000355485 ATP2B2Q01814 1243 aa9.06□□□□□ -0.96
VANGL1-202ENST00000355485 LIMCH1Q9UPQ0 1083 aa9.06□□□□□ -0.96
VANGL1-202ENST00000355485 JADE2Q9NQC1 790 aa9.06□□□□□ -0.96
VANGL1-202ENST00000355485 F6X3S4 739 aa9.06□□□□□ -0.96
VANGL1-202ENST00000355485 SRGAP3O43295 1099 aa9.06□□□□□ -0.96
VANGL1-202ENST00000355485 MCM3P25205 808 aa9.06□□□□□ -0.96
VANGL1-202ENST00000355485 NKTRP30414 1462 aaKnown RBP9.05□□□□□ -0.96
VANGL1-202ENST00000355485 CCDC160A6NGH7 325 aa9.05□□□□□ -0.96
VANGL1-202ENST00000355485 FKBP15Q5T1M5 1219 aa9.05□□□□□ -0.96
VANGL1-202ENST00000355485 VIMP08670 466 aaKnown RBP9.05□□□□□ -0.96
VANGL1-202ENST00000355485 CLNS1AP54105 237 aaKnown RBP9.05□□□□□ -0.96
VANGL1-202ENST00000355485 CNNM3Q8NE01 707 aa9.05□□□□□ -0.96
VANGL1-202ENST00000355485 DACT1Q9NYF0 836 aa9.05□□□□□ -0.96
VANGL1-202ENST00000355485 STIM1Q13586 685 aa9.05□□□□□ -0.96
VANGL1-202ENST00000355485 SPECC1Q5M775 1068 aa9.05□□□□□ -0.96
VANGL1-202ENST00000355485 CCDC82Q8N4S0 544 aa9.05□□□□□ -0.96
VANGL1-202ENST00000355485 UBASH3AP57075 661 aa9.05□□□□□ -0.96
VANGL1-202ENST00000355485 FKBP4Q02790 459 aaKnown RBP eCLIP9.05□□□□□ -0.96
VANGL1-202ENST00000355485 GOLGA1Q92805 767 aa9.05□□□□□ -0.96
VANGL1-202ENST00000355485 ERBINQ96RT1 1412 aa9.05□□□□□ -0.96
VANGL1-202ENST00000355485 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP9.05□□□□□ -0.96
VANGL1-202ENST00000355485 BOLA2Q9H3K6 86 aa9.05□□□□□ -0.96
VANGL1-202ENST00000355485 TRIM27P14373 513 aa9.05□□□□□ -0.96
VANGL1-202ENST00000355485 FERP16591 822 aa9.05□□□□□ -0.96
VANGL1-202ENST00000355485 SSR1P43307 286 aaKnown RBP9.05□□□□□ -0.96
VANGL1-202ENST00000355485 CCDC144CPQ8IYA2 1237 aa9.05□□□□□ -0.96
VANGL1-202ENST00000355485 CTAGE15A4D2H0 777 aa9.04□□□□□ -0.96
VANGL1-202ENST00000355485 RAB11FIP3O75154 756 aa9.04□□□□□ -0.96
VANGL1-202ENST00000355485 CTAGE8P0CG41 777 aa9.04□□□□□ -0.96
VANGL1-202ENST00000355485 OAS2P29728 719 aaKnown RBP9.04□□□□□ -0.96
VANGL1-202ENST00000355485 CTAGE6Q86UF2 777 aa9.04□□□□□ -0.96
VANGL1-202ENST00000355485 CTAGE4Q8IX94 777 aa9.04□□□□□ -0.96
VANGL1-202ENST00000355485 SCAND2PQ9GZW5 306 aaPredicted RBP9.04□□□□□ -0.96
VANGL1-202ENST00000355485 CCT4P50991 539 aaKnown RBP9.04□□□□□ -0.96
VANGL1-202ENST00000355485 CCDC121Q6ZUS5 278 aa9.04□□□□□ -0.96
VANGL1-202ENST00000355485 CPSF2Q9P2I0 782 aaKnown RBP9.04□□□□□ -0.96
VANGL1-202ENST00000355485 GPRASP1Q5JY77 1395 aa9.04□□□□□ -0.96
VANGL1-202ENST00000355485 SELENOSQ9BQE4 189 aa9.04□□□□□ -0.96
VANGL1-202ENST00000355485 CCDC8Q9H0W5 538 aaPredicted RBP9.04□□□□□ -0.96
VANGL1-202ENST00000355485 SMIM23A6NLE4 172 aa9.04□□□□□ -0.96
VANGL1-202ENST00000355485 RAPGEF4Q8WZA2 1011 aa9.04□□□□□ -0.96
VANGL1-202ENST00000355485 CCDC114Q96M63 670 aa9.04□□□□□ -0.96
VANGL1-202ENST00000355485 TCEANC2Q96MN5 208 aa9.04□□□□□ -0.96
VANGL1-202ENST00000355485 LZTFL1Q9NQ48 299 aa9.04□□□□□ -0.96
VANGL1-202ENST00000355485 SYT1P21579 422 aa9.04□□□□□ -0.96
VANGL1-202ENST00000355485 TMPOP42166 694 aaKnown RBP9.04□□□□□ -0.96
VANGL1-202ENST00000355485 CCDC117Q8IWD4 279 aaPredicted RBP9.04□□□□□ -0.96
VANGL1-202ENST00000355485 TTC22Q5TAA0 569 aa9.04□□□□□ -0.96
VANGL1-202ENST00000355485 CARD6Q9BX69 1037 aa9.04□□□□□ -0.96
VANGL1-202ENST00000355485 IGF1RP08069 1367 aa9.04□□□□□ -0.96
VANGL1-202ENST00000355485 TMCO5BA8MYB1 307 aa9.04□□□□□ -0.96
VANGL1-202ENST00000355485 PAFAH1B1P43034 410 aa9.04□□□□□ -0.96
VANGL1-202ENST00000355485 EVCP57679 992 aa9.04□□□□□ -0.96
VANGL1-202ENST00000355485 EHBP1L1Q8N3D4 1523 aa9.04□□□□□ -0.96
VANGL1-202ENST00000355485 CEP63Q96MT8 703 aa9.03□□□□□ -0.96
VANGL1-202ENST00000355485 TYRO3Q06418 890 aa9.03□□□□□ -0.96
VANGL1-202ENST00000355485 ZNF569Q5MCW4 686 aa9.03□□□□□ -0.96
VANGL1-202ENST00000355485 PAIP2Q9BPZ3 127 aaKnown RBP9.03□□□□□ -0.96
VANGL1-202ENST00000355485 SRCIN1Q9C0H9 1055 aa9.03□□□□□ -0.96
VANGL1-202ENST00000355485 SULT6B1Q6IMI4 303 aa9.03□□□□□ -0.96
VANGL1-202ENST00000355485 RPAP2Q8IXW5 612 aaPredicted RBP9.03□□□□□ -0.96
VANGL1-202ENST00000355485 YEATS4O95619 227 aa9.03□□□□□ -0.96
VANGL1-202ENST00000355485 TDRD12Q587J7 1177 aaKnown RBP9.03□□□□□ -0.96
VANGL1-202ENST00000355485 JARID2Q92833 1246 aaPredicted RBP9.03□□□□□ -0.96
VANGL1-202ENST00000355485 EBAG9O00559 213 aa9.03□□□□□ -0.96
VANGL1-202ENST00000355485 PPP1R12BO60237 982 aaPredicted RBP9.03□□□□□ -0.96
VANGL1-202ENST00000355485 MYL6BP14649 208 aa9.03□□□□□ -0.96
VANGL1-202ENST00000355485 CHMP4BP1P59074 171 aa9.03□□□□□ -0.96
VANGL1-202ENST00000355485 CTAGE5O15320 804 aa9.02□□□□□ -0.96
VANGL1-202ENST00000355485 ZNF76P36508 570 aa9.02□□□□□ -0.96
VANGL1-202ENST00000355485 AQRO60306 1485 aaKnown RBP eCLIP9.02□□□□□ -0.966e-6■■■■□ 25.1
VANGL1-202ENST00000355485 GADD45BO75293 160 aaPredicted RBP9.02□□□□□ -0.97
VANGL1-202ENST00000355485 NUCB1Q02818 461 aa9.02□□□□□ -0.97
VANGL1-202ENST00000355485 HS1BP3Q53T59 392 aa9.02□□□□□ -0.97
VANGL1-202ENST00000355485 LRRC2Q9BYS8 371 aa9.02□□□□□ -0.97
VANGL1-202ENST00000355485 UTP14AQ9BVJ6 771 aaKnown RBP9.02□□□□□ -0.97
VANGL1-202ENST00000355485 PPP2R3AQ06190 1150 aa9.02□□□□□ -0.97
VANGL1-202ENST00000355485 GABPB1Q06547 395 aaPredicted RBP9.02□□□□□ -0.97
VANGL1-202ENST00000355485 CCDC6Q16204 474 aa9.02□□□□□ -0.97
VANGL1-202ENST00000355485 SNX21Q969T3 373 aa9.02□□□□□ -0.97
VANGL1-202ENST00000355485 PLEKHH1Q9ULM0 1364 aa9.02□□□□□ -0.97
VANGL1-202ENST00000355485 CCDC96Q2M329 555 aa9.02□□□□□ -0.97
VANGL1-202ENST00000355485 ZSCAN29Q8IWY8 852 aaPredicted RBP9.02□□□□□ -0.97
VANGL1-202ENST00000355485 SMC5Q8IY18 1101 aa9.02□□□□□ -0.97
VANGL1-202ENST00000355485 FAM200AQ8TCP9 573 aa9.02□□□□□ -0.97
VANGL1-202ENST00000355485 IFNKQ9P0W0 207 aa9.02□□□□□ -0.97
VANGL1-202ENST00000355485 SDSP20132 328 aa9.02□□□□□ -0.97
VANGL1-202ENST00000355485 PRPF4BQ13523 1007 aaKnown RBP9.02□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms