RNA–Protein interactions for RNA: ENST00000354880.9

CTSA-202, Transcript of cathepsin A, humanhuman

TSL 2 BASIC

Gene CTSA, Length 1,820 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-202ENST00000354880 ARFGEF2Q9Y6D5 1785 aa19.6■□□□□ 0.73
CTSA-202ENST00000354880 GNAI2P04899 355 aa19.58■□□□□ 0.73
CTSA-202ENST00000354880 IL6STP40189 918 aaPredicted RBP19.58■□□□□ 0.73
CTSA-202ENST00000354880 CRKLP46109 303 aaKnown RBP19.58■□□□□ 0.73
CTSA-202ENST00000354880 CWF19L2Q2TBE0 894 aaKnown RBP19.58■□□□□ 0.73
CTSA-202ENST00000354880 POTEAQ6S8J7 498 aa19.58■□□□□ 0.73
CTSA-202ENST00000354880 MYD88Q99836 296 aa19.58■□□□□ 0.73
CTSA-202ENST00000354880 CCDC87Q9NVE4 849 aa19.58■□□□□ 0.73
CTSA-202ENST00000354880 COL5A3P25940 1745 aaPredicted RBP19.57■□□□□ 0.72
CTSA-202ENST00000354880 NUP188Q5SRE5 1749 aa19.57■□□□□ 0.72
CTSA-202ENST00000354880 IGKV5-2P06315 115 aa19.57■□□□□ 0.72
CTSA-202ENST00000354880 UBTFL1P0CB47 393 aaPredicted RBP19.57■□□□□ 0.72
CTSA-202ENST00000354880 INTS5Q6P9B9 1019 aaKnown RBP19.57■□□□□ 0.72
CTSA-202ENST00000354880 RPAP2Q8IXW5 612 aaPredicted RBP19.57■□□□□ 0.72
CTSA-202ENST00000354880 KIF6Q6ZMV9 814 aa19.56■□□□□ 0.72
CTSA-202ENST00000354880 NPM2Q86SE8 214 aaKnown RBP19.56■□□□□ 0.72
CTSA-202ENST00000354880 ZBTB3Q9H5J0 574 aa19.56■□□□□ 0.72
CTSA-202ENST00000354880 LY75O60449 1722 aa19.56■□□□□ 0.72
CTSA-202ENST00000354880 RREB1Q92766 1687 aa19.56■□□□□ 0.72
CTSA-202ENST00000354880 IBTKQ9P2D0 1353 aaPredicted RBP19.56■□□□□ 0.72
CTSA-202ENST00000354880 MYH14Q7Z406 1995 aaKnown RBP19.56■□□□□ 0.72
CTSA-202ENST00000354880 NEURL1BA8MQ27 555 aa19.55■□□□□ 0.72
CTSA-202ENST00000354880 CEP85Q6P2H3 762 aa19.55■□□□□ 0.72
CTSA-202ENST00000354880 SIRT2Q8IXJ6 389 aa19.55■□□□□ 0.72
CTSA-202ENST00000354880 ANKRD44Q8N8A2 993 aa19.55■□□□□ 0.72
CTSA-202ENST00000354880 C9orf78Q9NZ63 289 aaPredicted RBP19.55■□□□□ 0.72
CTSA-202ENST00000354880 TRIM37O94972 964 aa19.55■□□□□ 0.72
CTSA-202ENST00000354880 NBPF7P0C2Y1 421 aaPredicted RBP19.55■□□□□ 0.72
CTSA-202ENST00000354880 EIF5P55010 431 aaKnown RBP19.54■□□□□ 0.72
CTSA-202ENST00000354880 LINC00116Q8NCU8 138 aa19.54■□□□□ 0.72
CTSA-202ENST00000354880 CCNL1Q9UK58 526 aaPredicted RBP19.54■□□□□ 0.72
CTSA-202ENST00000354880 LRRFIP2Q9Y608 721 aaKnown RBP19.54■□□□□ 0.72
CTSA-202ENST00000354880 KCNQ4P56696 695 aa19.53■□□□□ 0.72
CTSA-202ENST00000354880 ARXQ96QS3 562 aa19.53■□□□□ 0.72
CTSA-202ENST00000354880 MAP3K15Q6ZN16 1313 aa19.53■□□□□ 0.72
CTSA-202ENST00000354880 GRM8O00222 908 aa19.53■□□□□ 0.72
CTSA-202ENST00000354880 GCKRQ14397 625 aa19.53■□□□□ 0.72
CTSA-202ENST00000354880 AFDNP55196 1824 aaKnown RBP19.52■□□□□ 0.72
CTSA-202ENST00000354880 ATP5J2-PTCD1G3V325 749 aa19.52■□□□□ 0.72
CTSA-202ENST00000354880 HDAC5Q9UQL6 1122 aa19.52■□□□□ 0.72
CTSA-202ENST00000354880 UTYO14607 1347 aa19.52■□□□□ 0.71
CTSA-202ENST00000354880 CNTNAP4Q9C0A0 1308 aa19.52■□□□□ 0.71
CTSA-202ENST00000354880 DZIP3Q86Y13 1208 aaKnown RBP19.51■□□□□ 0.71
CTSA-202ENST00000354880 SMC5Q8IY18 1101 aa19.51■□□□□ 0.71
CTSA-202ENST00000354880 HMMRO75330 724 aa19.5■□□□□ 0.71
CTSA-202ENST00000354880 TCIRG1Q13488 830 aa19.5■□□□□ 0.71
CTSA-202ENST00000354880 RC3H1Q5TC82 1133 aaKnown RBP19.5■□□□□ 0.71
CTSA-202ENST00000354880 GIGYF2Q6Y7W6 1299 aaKnown RBP19.5■□□□□ 0.71
CTSA-202ENST00000354880 ERVV-1B6SEH8 477 aa19.49■□□□□ 0.71
CTSA-202ENST00000354880 GCC1Q96CN9 775 aa19.49■□□□□ 0.71
CTSA-202ENST00000354880 TBC1D2BQ9UPU7 963 aa19.49■□□□□ 0.71
CTSA-202ENST00000354880 TAF1LQ8IZX4 1826 aa19.49■□□□□ 0.71
CTSA-202ENST00000354880 ATP8B2P98198 1209 aa19.48■□□□□ 0.71
CTSA-202ENST00000354880 CCDC191Q8NCU4 936 aa19.48■□□□□ 0.71
CTSA-202ENST00000354880 CWC25Q9NXE8 425 aaPredicted RBP19.48■□□□□ 0.71
CTSA-202ENST00000354880 COL15A1P39059 1388 aa19.48■□□□□ 0.71
CTSA-202ENST00000354880 HSP90AB3PQ58FF7 597 aa19.48■□□□□ 0.71
CTSA-202ENST00000354880 ISCA1Q9BUE6 129 aa19.48■□□□□ 0.71
CTSA-202ENST00000354880 A0A087WZG4 1122 aa19.47■□□□□ 0.71
CTSA-202ENST00000354880 TRIM28Q13263 835 aaKnown RBP19.47■□□□□ 0.71
CTSA-202ENST00000354880 HLFQ16534 295 aa19.47■□□□□ 0.71
CTSA-202ENST00000354880 SKAP1Q86WV1 359 aa19.47■□□□□ 0.71
CTSA-202ENST00000354880 NUP98P52948 1817 aa19.46■□□□□ 0.71
CTSA-202ENST00000354880 DCTPP1Q9H773 170 aa19.46■□□□□ 0.71
CTSA-202ENST00000354880 PDZRN3Q9UPQ7 1066 aa19.46■□□□□ 0.71
CTSA-202ENST00000354880 PNMA6EA0A0J9YXQ4 647 aa19.46■□□□□ 0.71
CTSA-202ENST00000354880 SLC27A3Q5K4L6 730 aa19.46■□□□□ 0.71
CTSA-202ENST00000354880 SUCLG2Q96I99 432 aa19.46■□□□□ 0.71
CTSA-202ENST00000354880 LRRC4BQ9NT99 713 aa19.46■□□□□ 0.71
CTSA-202ENST00000354880 RPS6KA4O75676 772 aa19.45■□□□□ 0.7
CTSA-202ENST00000354880 ANKRD36CQ5JPF3 1778 aa19.45■□□□□ 0.7
CTSA-202ENST00000354880 UBE3BQ7Z3V4 1068 aa19.44■□□□□ 0.7
CTSA-202ENST00000354880 PPP1R42Q7Z4L9 355 aa19.44■□□□□ 0.7
CTSA-202ENST00000354880 KAZALD1Q96I82 304 aa19.44■□□□□ 0.7
CTSA-202ENST00000354880 C4BP0C0L5 1744 aa19.44■□□□□ 0.7
CTSA-202ENST00000354880 H7C1W4 665 aa19.44■□□□□ 0.7
CTSA-202ENST00000354880 CAMTA2O94983 1202 aa19.44■□□□□ 0.7
CTSA-202ENST00000354880 NUCB1Q02818 461 aa19.44■□□□□ 0.7
CTSA-202ENST00000354880 MTX1Q13505 466 aa19.44■□□□□ 0.7
CTSA-202ENST00000354880 SSH3Q8TE77 659 aa19.44■□□□□ 0.7
CTSA-202ENST00000354880 PLSCR1O15162 318 aa19.43■□□□□ 0.7
CTSA-202ENST00000354880 GNPATO15228 680 aa19.43■□□□□ 0.7
CTSA-202ENST00000354880 SRGAP3O43295 1099 aa19.43■□□□□ 0.7
CTSA-202ENST00000354880 CASP7P55210 303 aa19.43■□□□□ 0.7
CTSA-202ENST00000354880 BICC1Q9H694 974 aaKnown RBP19.43■□□□□ 0.7
CTSA-202ENST00000354880 RTCBQ9Y3I0 505 aaKnown RBP19.43■□□□□ 0.7
CTSA-202ENST00000354880 JARID2Q92833 1246 aaPredicted RBP19.42■□□□□ 0.7
CTSA-202ENST00000354880 APBA3O96018 575 aa19.41■□□□□ 0.7
CTSA-202ENST00000354880 GPTP24298 496 aa19.41■□□□□ 0.7
CTSA-202ENST00000354880 RGS3P49796 1198 aa19.41■□□□□ 0.7
CTSA-202ENST00000354880 POLA2Q14181 598 aa19.41■□□□□ 0.7
CTSA-202ENST00000354880 AK7Q96M32 723 aa19.41■□□□□ 0.7
CTSA-202ENST00000354880 HMGB2P26583 209 aaKnown RBP19.41■□□□□ 0.7
CTSA-202ENST00000354880 TXNRD1Q16881 649 aa19.41■□□□□ 0.7
CTSA-202ENST00000354880 ANKRD45Q5TZF3 282 aa19.41■□□□□ 0.7
CTSA-202ENST00000354880 NLRP10Q86W26 655 aa19.41■□□□□ 0.7
CTSA-202ENST00000354880 CHD1LQ86WJ1 897 aa19.41■□□□□ 0.7
CTSA-202ENST00000354880 ZNF34Q8IZ26 560 aa19.4■□□□□ 0.7
CTSA-202ENST00000354880 ZNF652Q9Y2D9 606 aa19.4■□□□□ 0.7
CTSA-202ENST00000354880 BCORQ6W2J9 1755 aa19.4■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms