RNA–Protein interactions for RNA: ENST00000354822.6

NKX2-1-201, Transcript of NK2 homeobox 1, humanhuman

TSL 1 (best) BASIC

Gene NKX2-1, Length 2,191 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-1-201ENST00000354822 CSB-PGBD3P0DP91 1061 aa27.02■■□□□ 1.92
NKX2-1-201ENST00000354822 PDIA6Q15084 440 aa27.02■■□□□ 1.92
NKX2-1-201ENST00000354822 LARP1Q6PKG0 1096 aaKnown RBP27.02■■□□□ 1.92
NKX2-1-201ENST00000354822 AK9Q5TCS8 1911 aa27.01■■□□□ 1.91
NKX2-1-201ENST00000354822 CWF19L2Q2TBE0 894 aaKnown RBP27.01■■□□□ 1.91
NKX2-1-201ENST00000354822 DDX49Q9Y6V7 483 aaKnown RBP27.01■■□□□ 1.91
NKX2-1-201ENST00000354822 SCN11AQ9UI33 1791 aa27■■□□□ 1.91
NKX2-1-201ENST00000354822 CHRNA2Q15822 529 aa26.99■■□□□ 1.91
NKX2-1-201ENST00000354822 MCTP1Q6DN14 999 aa26.99■■□□□ 1.91
NKX2-1-201ENST00000354822 ECHDC1Q9NTX5 307 aa26.99■■□□□ 1.91
NKX2-1-201ENST00000354822 RAD50Q92878 1312 aa26.99■■□□□ 1.91
NKX2-1-201ENST00000354822 KDM6AO15550 1401 aaPredicted RBP26.99■■□□□ 1.91
NKX2-1-201ENST00000354822 MEGF6O75095 1541 aa26.99■■□□□ 1.91
NKX2-1-201ENST00000354822 NEXNQ0ZGT2 675 aa26.98■■□□□ 1.91
NKX2-1-201ENST00000354822 KIAA1211Q6ZU35 1233 aa26.98■■□□□ 1.91
NKX2-1-201ENST00000354822 RIC3Q7Z5B4 369 aa26.98■■□□□ 1.91
NKX2-1-201ENST00000354822 NFATC2IPQ8NCF5 419 aa26.98■■□□□ 1.91
NKX2-1-201ENST00000354822 RUFY2Q8WXA3 655 aa26.98■■□□□ 1.91
NKX2-1-201ENST00000354822 ARXQ96QS3 562 aa26.98■■□□□ 1.91
NKX2-1-201ENST00000354822 MAP4K4O95819 1239 aaPredicted RBP26.98■■□□□ 1.91
NKX2-1-201ENST00000354822 IFIT2P09913 472 aaKnown RBP26.98■■□□□ 1.91
NKX2-1-201ENST00000354822 DCAF5Q96JK2 942 aa26.98■■□□□ 1.91
NKX2-1-201ENST00000354822 ZNF335Q9H4Z2 1342 aaPredicted RBP26.97■■□□□ 1.91
NKX2-1-201ENST00000354822 AIMP1Q12904 312 aaKnown RBP26.97■■□□□ 1.91
NKX2-1-201ENST00000354822 PKP1Q13835 747 aa26.97■■□□□ 1.91
NKX2-1-201ENST00000354822 SLC39A6Q13433 755 aa26.96■■□□□ 1.91
NKX2-1-201ENST00000354822 SLAIN2Q9P270 581 aa26.96■■□□□ 1.91
NKX2-1-201ENST00000354822 ZDHHC9Q9Y397 364 aa26.96■■□□□ 1.91
NKX2-1-201ENST00000354822 G3BP1Q13283 466 aaKnown RBP eCLIP26.95■■□□□ 1.91
NKX2-1-201ENST00000354822 SUCLG2Q96I99 432 aa26.95■■□□□ 1.91
NKX2-1-201ENST00000354822 IL25Q9H293 177 aa26.95■■□□□ 1.91
NKX2-1-201ENST00000354822 LMBRD1Q9NUN5 540 aa26.95■■□□□ 1.91
NKX2-1-201ENST00000354822 SOS2Q07890 1332 aaPredicted RBP26.95■■□□□ 1.91
NKX2-1-201ENST00000354822 LSG1Q9H089 658 aaKnown RBP26.95■■□□□ 1.9
NKX2-1-201ENST00000354822 SNRPA1P09661 255 aaKnown RBP26.94■■□□□ 1.9
NKX2-1-201ENST00000354822 PKD1L3Q7Z443 1732 aa26.94■■□□□ 1.9
NKX2-1-201ENST00000354822 TTC5Q8N0Z6 440 aa26.94■■□□□ 1.9
NKX2-1-201ENST00000354822 KAZALD1Q96I82 304 aa26.93■■□□□ 1.9
NKX2-1-201ENST00000354822 BICC1Q9H694 974 aaKnown RBP26.93■■□□□ 1.9
NKX2-1-201ENST00000354822 DIAPH3Q9NSV4 1193 aa26.93■■□□□ 1.9
NKX2-1-201ENST00000354822 PA2G4Q9UQ80 394 aaKnown RBP26.93■■□□□ 1.9
NKX2-1-201ENST00000354822 IGKV5-2P06315 115 aa26.92■■□□□ 1.9
NKX2-1-201ENST00000354822 EVI5LQ96CN4 794 aa26.92■■□□□ 1.9
NKX2-1-201ENST00000354822 METTL22Q9BUU2 404 aaPredicted RBP26.92■■□□□ 1.9
NKX2-1-201ENST00000354822 PANK2Q9BZ23 570 aa26.92■■□□□ 1.9
NKX2-1-201ENST00000354822 NEURL1BA8MQ27 555 aa26.91■■□□□ 1.9
NKX2-1-201ENST00000354822 CWC27Q6UX04 472 aaKnown RBP26.91■■□□□ 1.9
NKX2-1-201ENST00000354822 XAGE3Q8WTP9 111 aa26.91■■□□□ 1.9
NKX2-1-201ENST00000354822 ZNF496Q96IT1 587 aaPredicted RBP26.91■■□□□ 1.9
NKX2-1-201ENST00000354822 MRC1P22897 1456 aa26.91■■□□□ 1.9
NKX2-1-201ENST00000354822 BRD1O95696 1058 aa26.91■■□□□ 1.9
NKX2-1-201ENST00000354822 COPS6Q7L5N1 327 aa26.91■■□□□ 1.9
NKX2-1-201ENST00000354822 AACSQ86V21 672 aa26.91■■□□□ 1.9
NKX2-1-201ENST00000354822 GAS2L3Q86XJ1 694 aa26.91■■□□□ 1.9
NKX2-1-201ENST00000354822 FMNL2Q96PY5 1086 aa26.91■■□□□ 1.9
NKX2-1-201ENST00000354822 UPF3BQ9BZI7 483 aaKnown RBP26.91■■□□□ 1.9
NKX2-1-201ENST00000354822 MYL6BP14649 208 aa26.9■■□□□ 1.9
NKX2-1-201ENST00000354822 SNX14Q9Y5W7 946 aa26.9■■□□□ 1.9
NKX2-1-201ENST00000354822 HIP1O00291 1037 aa26.9■■□□□ 1.9
NKX2-1-201ENST00000354822 GCKRQ14397 625 aa26.9■■□□□ 1.9
NKX2-1-201ENST00000354822 ANKRD13DQ6ZTN6 518 aa26.9■■□□□ 1.9
NKX2-1-201ENST00000354822 SASH1O94885 1247 aa26.88■■□□□ 1.89
NKX2-1-201ENST00000354822 CYP27B1O15528 508 aa26.88■■□□□ 1.89
NKX2-1-201ENST00000354822 C5P01031 1676 aa26.88■■□□□ 1.89
NKX2-1-201ENST00000354822 ZNF445P59923 1031 aa26.87■■□□□ 1.89
NKX2-1-201ENST00000354822 PRDM11Q9NQV5 511 aa26.87■■□□□ 1.89
NKX2-1-201ENST00000354822 PRPF40AO75400 957 aaKnown RBP26.87■■□□□ 1.89
NKX2-1-201ENST00000354822 CABP4P57796 275 aa26.86■■□□□ 1.89
NKX2-1-201ENST00000354822 MYD88Q99836 296 aa26.86■■□□□ 1.89
NKX2-1-201ENST00000354822 LRP10Q7Z4F1 713 aa26.85■■□□□ 1.89
NKX2-1-201ENST00000354822 USP16Q9Y5T5 823 aa26.85■■□□□ 1.89
NKX2-1-201ENST00000354822 ABCA3Q99758 1704 aa26.85■■□□□ 1.89
NKX2-1-201ENST00000354822 EAF2Q96CJ1 260 aaPredicted RBP26.85■■□□□ 1.89
NKX2-1-201ENST00000354822 TTC14Q96N46 770 aa26.85■■□□□ 1.89
NKX2-1-201ENST00000354822 WDR17Q8IZU2 1322 aa26.84■■□□□ 1.89
NKX2-1-201ENST00000354822 NCLP19338 710 aaKnown RBP26.84■■□□□ 1.89
NKX2-1-201ENST00000354822 PARP4Q9UKK3 1724 aaKnown RBP26.84■■□□□ 1.89
NKX2-1-201ENST00000354822 NOL8Q76FK4 1167 aaKnown RBP26.84■■□□□ 1.89
NKX2-1-201ENST00000354822 COL15A1P39059 1388 aa26.83■■□□□ 1.89
NKX2-1-201ENST00000354822 KCNB2Q92953 911 aa26.83■■□□□ 1.89
NKX2-1-201ENST00000354822 RASEFQ8IZ41 740 aa26.82■■□□□ 1.88
NKX2-1-201ENST00000354822 LIMCH1Q9UPQ0 1083 aa26.82■■□□□ 1.88
NKX2-1-201ENST00000354822 NHSL1Q5SYE7 1610 aa26.82■■□□□ 1.88
NKX2-1-201ENST00000354822 CAVIN1Q6NZI2 390 aaKnown RBP26.82■■□□□ 1.88
NKX2-1-201ENST00000354822 TM6SF1Q9BZW5 370 aa26.82■■□□□ 1.88
NKX2-1-201ENST00000354822 COPRSQ9NQ92 184 aa26.82■■□□□ 1.88
NKX2-1-201ENST00000354822 WDR33Q9C0J8 1336 aaKnown RBP26.82■■□□□ 1.88
NKX2-1-201ENST00000354822 MBD3O95983 291 aa26.81■■□□□ 1.88
NKX2-1-201ENST00000354822 ZSCAN23Q3MJ62 389 aa26.8■■□□□ 1.88
NKX2-1-201ENST00000354822 CCDC8Q9H0W5 538 aaPredicted RBP26.8■■□□□ 1.88
NKX2-1-201ENST00000354822 COL5A2P05997 1499 aaPredicted RBP26.8■■□□□ 1.88
NKX2-1-201ENST00000354822 ERBB4Q15303 1308 aa26.8■■□□□ 1.88
NKX2-1-201ENST00000354822 SNRKQ9NRH2 765 aa26.8■■□□□ 1.88
NKX2-1-201ENST00000354822 ZSCAN21Q9Y5A6 473 aaPredicted RBP26.8■■□□□ 1.88
NKX2-1-201ENST00000354822 AK2P54819 239 aa26.79■■□□□ 1.88
NKX2-1-201ENST00000354822 TOM1L2Q6ZVM7 507 aa26.79■■□□□ 1.88
NKX2-1-201ENST00000354822 PLBD2Q8NHP8 589 aa26.78■■□□□ 1.88
NKX2-1-201ENST00000354822 GPT2Q8TD30 523 aa26.78■■□□□ 1.88
NKX2-1-201ENST00000354822 ZKSCAN1P17029 563 aaPredicted RBP26.78■■□□□ 1.88
NKX2-1-201ENST00000354822 RABL6Q3YEC7 729 aaPredicted RBP26.78■■□□□ 1.88
Retrieved 100 of 20,778 RNA–protein pairs in 9.7 ms