RNA–Protein interactions for RNA: ENST00000354412.7

LRP8-203, Transcript of LDL receptor related protein 8, humanhuman

TSL 1 (best) BASIC

Gene LRP8, Length 2,553 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRP8-203ENST00000354412 SOS1Q07889 1333 aaPredicted RBP16.56■□□□□ 0.24
LRP8-203ENST00000354412 FAM177BA6PVY3 158 aa16.55■□□□□ 0.24
LRP8-203ENST00000354412 SPC24Q8NBT2 197 aa16.55■□□□□ 0.24
LRP8-203ENST00000354412 LRRFIP2Q9Y608 721 aaKnown RBP16.55■□□□□ 0.24
LRP8-203ENST00000354412 UBTFL1P0CB47 393 aaPredicted RBP16.55■□□□□ 0.24
LRP8-203ENST00000354412 DNM1Q05193 864 aaKnown RBP16.55■□□□□ 0.24
LRP8-203ENST00000354412 SSH3Q8TE77 659 aa16.55■□□□□ 0.24
LRP8-203ENST00000354412 LSG1Q9H089 658 aaKnown RBP16.55■□□□□ 0.24
LRP8-203ENST00000354412 RUFY2Q8WXA3 655 aa16.54■□□□□ 0.24
LRP8-203ENST00000354412 IL25Q9H293 177 aa16.54■□□□□ 0.24
LRP8-203ENST00000354412 ADAMTSL3P82987 1691 aa16.54■□□□□ 0.24
LRP8-203ENST00000354412 AP5Z1O43299 807 aa16.54■□□□□ 0.24
LRP8-203ENST00000354412 GJB2P29033 226 aa16.54■□□□□ 0.24
LRP8-203ENST00000354412 MAP3K11Q16584 847 aa16.54■□□□□ 0.24
LRP8-203ENST00000354412 VPS53Q5VIR6 699 aa16.54■□□□□ 0.24
LRP8-203ENST00000354412 ANKLE2Q86XL3 938 aa16.54■□□□□ 0.24
LRP8-203ENST00000354412 IL1RAPL2Q9NP60 686 aa16.54■□□□□ 0.24
LRP8-203ENST00000354412 OGFRQ9NZT2 677 aa16.54■□□□□ 0.24
LRP8-203ENST00000354412 MTMR6Q9Y217 621 aa16.54■□□□□ 0.24
LRP8-203ENST00000354412 SBNO1A3KN83 1393 aa16.53■□□□□ 0.24
LRP8-203ENST00000354412 TAF3Q5VWG9 929 aa16.53■□□□□ 0.24
LRP8-203ENST00000354412 HYPKQ9NX55 129 aa16.53■□□□□ 0.24
LRP8-203ENST00000354412 SPDYE4A6NLX3 237 aa16.53■□□□□ 0.24
LRP8-203ENST00000354412 CASTP20810 708 aaKnown RBP16.53■□□□□ 0.24
LRP8-203ENST00000354412 NUTM1Q86Y26 1132 aa16.53■□□□□ 0.24
LRP8-203ENST00000354412 NGDNQ8NEJ9 315 aaKnown RBP16.53■□□□□ 0.24
LRP8-203ENST00000354412 PAXBP1Q9Y5B6 917 aa16.53■□□□□ 0.24
LRP8-203ENST00000354412 MARF1Q9Y4F3 1742 aaKnown RBP16.53■□□□□ 0.24
LRP8-203ENST00000354412 KRT85P78386 507 aa16.52■□□□□ 0.24
LRP8-203ENST00000354412 RASEFQ8IZ41 740 aa16.52■□□□□ 0.24
LRP8-203ENST00000354412 KIF1BPQ96EK5 621 aa16.52■□□□□ 0.24
LRP8-203ENST00000354412 TM6SF1Q9BZW5 370 aa16.52■□□□□ 0.24
LRP8-203ENST00000354412 FLT4P35916 1363 aa16.52■□□□□ 0.24
LRP8-203ENST00000354412 SMTNL1A8MU46 457 aa16.52■□□□□ 0.23
LRP8-203ENST00000354412 HTATSF1O43719 755 aaKnown RBP16.52■□□□□ 0.23
LRP8-203ENST00000354412 SURF6O75683 361 aaKnown RBP16.52■□□□□ 0.23
LRP8-203ENST00000354412 PI4K2BQ8TCG2 481 aa16.52■□□□□ 0.23
LRP8-203ENST00000354412 NUP62CLQ9H1M0 184 aa16.52■□□□□ 0.23
LRP8-203ENST00000354412 U2AF2P26368 475 aaKnown RBP eCLIP16.51■□□□□ 0.23
LRP8-203ENST00000354412 HSP90AB2PQ58FF8 381 aa16.51■□□□□ 0.23
LRP8-203ENST00000354412 ARHGAP30Q7Z6I6 1101 aaPredicted RBP16.51■□□□□ 0.23
LRP8-203ENST00000354412 RHPN1Q8TCX5 695 aa16.51■□□□□ 0.23
LRP8-203ENST00000354412 USP44Q9H0E7 712 aa16.51■□□□□ 0.23
LRP8-203ENST00000354412 PDRG1Q9NUG6 133 aa16.51■□□□□ 0.23
LRP8-203ENST00000354412 SETD1BQ9UPS6 1966 aaKnown RBP16.51■□□□□ 0.23
LRP8-203ENST00000354412 ELP1O95163 1332 aa16.51■□□□□ 0.23
LRP8-203ENST00000354412 MTHFSDQ2M296 383 aaKnown RBP16.51■□□□□ 0.23
LRP8-203ENST00000354412 HSP90AB4PQ58FF6 505 aa16.51■□□□□ 0.23
LRP8-203ENST00000354412 CCDC83Q8IWF9 413 aa16.51■□□□□ 0.23
LRP8-203ENST00000354412 CYP46A1Q9Y6A2 500 aa16.51■□□□□ 0.23
LRP8-203ENST00000354412 PDCP20941 246 aa16.5■□□□□ 0.23
LRP8-203ENST00000354412 DRC7Q8IY82 874 aa16.5■□□□□ 0.23
LRP8-203ENST00000354412 VPS37CA5D8V6 355 aaPredicted RBP16.5■□□□□ 0.23
LRP8-203ENST00000354412 PTGS1P23219 599 aa16.5■□□□□ 0.23
LRP8-203ENST00000354412 TYRO3Q06418 890 aa16.5■□□□□ 0.23
LRP8-203ENST00000354412 CGNQ9P2M7 1197 aaKnown RBP16.5■□□□□ 0.23
LRP8-203ENST00000354412 CCDC171Q6TFL3 1326 aa16.5■□□□□ 0.23
LRP8-203ENST00000354412 CWC27Q6UX04 472 aaKnown RBP16.49■□□□□ 0.23
LRP8-203ENST00000354412 PXDNLA1KZ92 1463 aa16.49■□□□□ 0.23
LRP8-203ENST00000354412 GOLGA6L4A6NEF3 574 aa16.49■□□□□ 0.23
LRP8-203ENST00000354412 MAP4K4O95819 1239 aaPredicted RBP16.49■□□□□ 0.23
LRP8-203ENST00000354412 POLA2Q14181 598 aa16.49■□□□□ 0.23
LRP8-203ENST00000354412 CCDC186Q7Z3E2 898 aa16.49■□□□□ 0.23
LRP8-203ENST00000354412 LARP6Q9BRS8 491 aaKnown RBP16.49■□□□□ 0.23
LRP8-203ENST00000354412 SCAND2PQ9GZW5 306 aaPredicted RBP16.49■□□□□ 0.23
LRP8-203ENST00000354412 ZSWIM6Q9HCJ5 1215 aa16.49■□□□□ 0.23
LRP8-203ENST00000354412 GLRX3O76003 335 aaKnown RBP16.48■□□□□ 0.23
LRP8-203ENST00000354412 ZKSCAN1P17029 563 aaPredicted RBP16.48■□□□□ 0.23
LRP8-203ENST00000354412 PPP1R42Q7Z4L9 355 aa16.48■□□□□ 0.23
LRP8-203ENST00000354412 C14orf37Q86TY3 774 aa16.48■□□□□ 0.23
LRP8-203ENST00000354412 TNMDQ9H2S6 317 aa16.48■□□□□ 0.23
LRP8-203ENST00000354412 MAP3K5Q99683 1374 aa16.48■□□□□ 0.23
LRP8-203ENST00000354412 TTC41PQ6P2S7 1318 aa16.48■□□□□ 0.23
LRP8-203ENST00000354412 FOXO3O43524 673 aa16.48■□□□□ 0.23
LRP8-203ENST00000354412 CAVIN2O95810 425 aa16.48■□□□□ 0.23
LRP8-203ENST00000354412 GABPB1Q06547 395 aaPredicted RBP16.48■□□□□ 0.23
LRP8-203ENST00000354412 NCBP1Q09161 790 aaKnown RBP16.48■□□□□ 0.23
LRP8-203ENST00000354412 LARP1BQ659C4 914 aaKnown RBP16.48■□□□□ 0.23
LRP8-203ENST00000354412 JAKMIP1Q96N16 626 aaKnown RBP16.48■□□□□ 0.23
LRP8-203ENST00000354412 MRVI1Q9Y6F6 885 aa16.48■□□□□ 0.23
LRP8-203ENST00000354412 KDRP35968 1356 aa16.47■□□□□ 0.23
LRP8-203ENST00000354412 CCDC112Q8NEF3 446 aa16.47■□□□□ 0.23
LRP8-203ENST00000354412 TRIM5Q9C035 493 aa16.47■□□□□ 0.23
LRP8-203ENST00000354412 DDX19AQ9NUU7 478 aaKnown RBP16.47■□□□□ 0.23
LRP8-203ENST00000354412 BABAM1Q9NWV8 329 aa16.47■□□□□ 0.23
LRP8-203ENST00000354412 SPG7Q9UQ90 795 aa16.47■□□□□ 0.23
LRP8-203ENST00000354412 MAP3K19Q56UN5 1328 aa16.47■□□□□ 0.23
LRP8-203ENST00000354412 TNNT1P13805 278 aa16.47■□□□□ 0.23
LRP8-203ENST00000354412 LARGE1O95461 756 aa16.46■□□□□ 0.23
LRP8-203ENST00000354412 LUZP1Q86V48 1076 aa16.46■□□□□ 0.23
LRP8-203ENST00000354412 KCNB2Q92953 911 aa16.46■□□□□ 0.23
LRP8-203ENST00000354412 C16orf45Q96MC5 204 aaPredicted RBP16.46■□□□□ 0.23
LRP8-203ENST00000354412 NPHP3Q7Z494 1330 aa16.46■□□□□ 0.23
LRP8-203ENST00000354412 USP42Q9H9J4 1324 aaKnown RBP16.46■□□□□ 0.23
LRP8-203ENST00000354412 SRGAP3O43295 1099 aa16.45■□□□□ 0.22
LRP8-203ENST00000354412 TTC6Q86TZ1 520 aa16.45■□□□□ 0.22
LRP8-203ENST00000354412 CTNNA3Q9UI47 895 aa16.45■□□□□ 0.22
LRP8-203ENST00000354412 LRRC37A3O60309 1634 aa16.45■□□□□ 0.22
LRP8-203ENST00000354412 ZNF75DP51815 510 aa16.45■□□□□ 0.22
LRP8-203ENST00000354412 CAMK4Q16566 473 aa16.45■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms