RNA–Protein interactions for RNA: ENST00000353739.8

RNF38-203, Transcript of ring finger protein 38, humanhuman

TSL 1 (best) BASIC

Gene RNF38, Length 4,945 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF38-203ENST00000353739 FBXO3Q9UK99 471 aa4.5□□□□□ -1.69
RNF38-203ENST00000353739 LRP6O75581 1613 aa4.5□□□□□ -1.69
RNF38-203ENST00000353739 SPATA31A3Q5VYP0 1347 aa4.5□□□□□ -1.69
RNF38-203ENST00000353739 UBR2Q8IWV8 1755 aa4.5□□□□□ -1.69
RNF38-203ENST00000353739 ARFGEF2Q9Y6D5 1785 aa4.5□□□□□ -1.69
RNF38-203ENST00000353739 CABP4P57796 275 aa4.5□□□□□ -1.69
RNF38-203ENST00000353739 SPRYD3Q8NCJ5 442 aa4.5□□□□□ -1.69
RNF38-203ENST00000353739 ORAI2Q96SN7 254 aa4.5□□□□□ -1.69
RNF38-203ENST00000353739 METTL22Q9BUU2 404 aaPredicted RBP4.5□□□□□ -1.69
RNF38-203ENST00000353739 TEX13AQ9BXU3 409 aaPredicted RBP4.5□□□□□ -1.69
RNF38-203ENST00000353739 ANO2Q9NQ90 1003 aa4.5□□□□□ -1.69
RNF38-203ENST00000353739 HMG20BQ9P0W2 317 aa4.5□□□□□ -1.69
RNF38-203ENST00000353739 WDR33Q9C0J8 1336 aaKnown RBP4.5□□□□□ -1.69
RNF38-203ENST00000353739 SPEF2Q9C093 1822 aa4.5□□□□□ -1.69
RNF38-203ENST00000353739 NHSL1Q5SYE7 1610 aa4.5□□□□□ -1.69
RNF38-203ENST00000353739 RGPD5Q99666 1765 aa4.49□□□□□ -1.69
RNF38-203ENST00000353739 PNMA6EA0A0J9YXQ4 647 aa4.49□□□□□ -1.69
RNF38-203ENST00000353739 FSD2A1L4K1 749 aa4.49□□□□□ -1.69
RNF38-203ENST00000353739 ZKSCAN1P17029 563 aaPredicted RBP4.49□□□□□ -1.69
RNF38-203ENST00000353739 HSPA4P34932 840 aa4.49□□□□□ -1.69
RNF38-203ENST00000353739 ZNF790Q6PG37 636 aa4.49□□□□□ -1.69
RNF38-203ENST00000353739 C16orf71Q8IYS4 520 aaPredicted RBP4.49□□□□□ -1.69
RNF38-203ENST00000353739 LRRC59Q96AG4 307 aaKnown RBP4.49□□□□□ -1.69
RNF38-203ENST00000353739 LGR6Q9HBX8 967 aa4.49□□□□□ -1.69
RNF38-203ENST00000353739 KDM6AO15550 1401 aaPredicted RBP4.49□□□□□ -1.69
RNF38-203ENST00000353739 AFDNP55196 1824 aaKnown RBP4.49□□□□□ -1.69
RNF38-203ENST00000353739 NECTIN2Q92692 538 aa4.49□□□□□ -1.69
RNF38-203ENST00000353739 TM6SF1Q9BZW5 370 aa4.49□□□□□ -1.69
RNF38-203ENST00000353739 PHAXQ9H814 394 aaKnown RBP4.49□□□□□ -1.69
RNF38-203ENST00000353739 STRCP1A6NGW2 1772 aa4.49□□□□□ -1.69
RNF38-203ENST00000353739 CUL4AQ13619 759 aa4.49□□□□□ -1.69
RNF38-203ENST00000353739 KRT32Q14532 448 aa4.49□□□□□ -1.69
RNF38-203ENST00000353739 DNAJC5Q9H3Z4 198 aa4.49□□□□□ -1.69
RNF38-203ENST00000353739 COL14A1Q05707 1796 aaKnown RBP4.49□□□□□ -1.69
RNF38-203ENST00000353739 BAG4O95429 457 aaKnown RBP4.49□□□□□ -1.69
RNF38-203ENST00000353739 CCDC173Q0VFZ6 552 aa4.49□□□□□ -1.69
RNF38-203ENST00000353739 ALDH8A1Q9H2A2 487 aaPredicted RBP4.49□□□□□ -1.69
RNF38-203ENST00000353739 NUP188Q5SRE5 1749 aa4.49□□□□□ -1.69
RNF38-203ENST00000353739 MEGF6O75095 1541 aa4.48□□□□□ -1.69
RNF38-203ENST00000353739 SGSM2O43147 1006 aa4.48□□□□□ -1.69
RNF38-203ENST00000353739 PLBD2Q8NHP8 589 aa4.48□□□□□ -1.69
RNF38-203ENST00000353739 PI4K2BQ8TCG2 481 aa4.48□□□□□ -1.69
RNF38-203ENST00000353739 GPR108Q9NPR9 543 aa4.48□□□□□ -1.69
RNF38-203ENST00000353739 WDR17Q8IZU2 1322 aa4.48□□□□□ -1.69
RNF38-203ENST00000353739 NEK4P51957 841 aa4.48□□□□□ -1.69
RNF38-203ENST00000353739 OTUD7AQ8TE49 926 aaPredicted RBP4.48□□□□□ -1.69
RNF38-203ENST00000353739 TRIM44Q96DX7 344 aaPredicted RBP4.48□□□□□ -1.69
RNF38-203ENST00000353739 GRPEL1Q9HAV7 217 aa4.48□□□□□ -1.69
RNF38-203ENST00000353739 CYP2E1P05181 493 aaPredicted RBP4.48□□□□□ -1.69
RNF38-203ENST00000353739 VPS53Q5VIR6 699 aa4.48□□□□□ -1.69
RNF38-203ENST00000353739 AEBP2Q6ZN18 517 aaPredicted RBP4.48□□□□□ -1.69
RNF38-203ENST00000353739 SNRKQ9NRH2 765 aa4.48□□□□□ -1.69
RNF38-203ENST00000353739 ATG3Q9NT62 314 aa4.48□□□□□ -1.69
RNF38-203ENST00000353739 DDX49Q9Y6V7 483 aaKnown RBP4.48□□□□□ -1.69
RNF38-203ENST00000353739 PLEKHG5O94827 1062 aa4.48□□□□□ -1.69
RNF38-203ENST00000353739 AACSQ86V21 672 aa4.48□□□□□ -1.69
RNF38-203ENST00000353739 ABCC12Q96J65 1359 aa4.47□□□□□ -1.69
RNF38-203ENST00000353739 NEURL1BA8MQ27 555 aa4.47□□□□□ -1.69
RNF38-203ENST00000353739 ZNF445P59923 1031 aa4.47□□□□□ -1.69
RNF38-203ENST00000353739 NUTM1Q86Y26 1132 aa4.47□□□□□ -1.69
RNF38-203ENST00000353739 KCNB2Q92953 911 aa4.47□□□□□ -1.69
RNF38-203ENST00000353739 TMX3Q96JJ7 454 aa4.47□□□□□ -1.69
RNF38-203ENST00000353739 LIMCH1Q9UPQ0 1083 aa4.47□□□□□ -1.69
RNF38-203ENST00000353739 KIF3AQ9Y496 699 aa4.47□□□□□ -1.69
RNF38-203ENST00000353739 CYP46A1Q9Y6A2 500 aa4.47□□□□□ -1.69
RNF38-203ENST00000353739 XIRP1Q702N8 1843 aaKnown RBP4.47□□□□□ -1.69
RNF38-203ENST00000353739 HMGB1P09429 215 aaKnown RBP4.47□□□□□ -1.69
RNF38-203ENST00000353739 NKX1-1Q15270 411 aaPredicted RBP4.47□□□□□ -1.69
RNF38-203ENST00000353739 HSP90AB3PQ58FF7 597 aa4.47□□□□□ -1.69
RNF38-203ENST00000353739 ANKRD13DQ6ZTN6 518 aa4.47□□□□□ -1.69
RNF38-203ENST00000353739 ZCRB1Q8TBF4 217 aaKnown RBP4.47□□□□□ -1.69
RNF38-203ENST00000353739 PPIL4Q8WUA2 492 aaKnown RBP eCLIP4.47□□□□□ -1.69
RNF38-203ENST00000353739 COPRSQ9NQ92 184 aa4.47□□□□□ -1.69
RNF38-203ENST00000353739 COL22A1Q8NFW1 1626 aaPredicted RBP4.47□□□□□ -1.69
RNF38-203ENST00000353739 TNS2Q63HR2 1409 aa4.47□□□□□ -1.69
RNF38-203ENST00000353739 WNK3Q9BYP7 1800 aa4.47□□□□□ -1.69
RNF38-203ENST00000353739 COL5A2P05997 1499 aaPredicted RBP4.47□□□□□ -1.69
RNF38-203ENST00000353739 PDCP20941 246 aa4.47□□□□□ -1.69
RNF38-203ENST00000353739 SSFA2P28290 1259 aa4.47□□□□□ -1.69
RNF38-203ENST00000353739 GCKRQ14397 625 aa4.47□□□□□ -1.69
RNF38-203ENST00000353739 MCTP1Q6DN14 999 aa4.47□□□□□ -1.69
RNF38-203ENST00000353739 CARD10Q9BWT7 1032 aa4.47□□□□□ -1.69
RNF38-203ENST00000353739 LSG1Q9H089 658 aaKnown RBP4.47□□□□□ -1.69
RNF38-203ENST00000353739 CIAO1O76071 339 aa4.47□□□□□ -1.69
RNF38-203ENST00000353739 NBPF7P0C2Y1 421 aaPredicted RBP4.47□□□□□ -1.69
RNF38-203ENST00000353739 HSP90B1P14625 803 aaKnown RBP4.47□□□□□ -1.69
RNF38-203ENST00000353739 IL2RBP14784 551 aa4.47□□□□□ -1.69
RNF38-203ENST00000353739 KCNJ4P48050 445 aa4.47□□□□□ -1.69
RNF38-203ENST00000353739 KIF6Q6ZMV9 814 aa4.47□□□□□ -1.69
RNF38-203ENST00000353739 MYD88Q99836 296 aa4.47□□□□□ -1.69
RNF38-203ENST00000353739 U3KPZ7 1027 aaPredicted RBP4.47□□□□□ -1.69
RNF38-203ENST00000353739 SOS2Q07890 1332 aaPredicted RBP4.46□□□□□ -1.69
RNF38-203ENST00000353739 GLI3P10071 1580 aa4.46□□□□□ -1.69
RNF38-203ENST00000353739 HS1BP3Q53T59 392 aa4.46□□□□□ -1.69
RNF38-203ENST00000353739 VSIG10Q8N0Z9 540 aa4.46□□□□□ -1.69
RNF38-203ENST00000353739 TMEM87AQ8NBN3 555 aa4.46□□□□□ -1.69
RNF38-203ENST00000353739 CDCA7Q9BWT1 371 aaPredicted RBP4.46□□□□□ -1.69
RNF38-203ENST00000353739 BICC1Q9H694 974 aaKnown RBP4.46□□□□□ -1.69
RNF38-203ENST00000353739 IL1RAPL2Q9NP60 686 aa4.46□□□□□ -1.69
RNF38-203ENST00000353739 PDRG1Q9NUG6 133 aa4.46□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms