RNA–Protein interactions for RNA: ENST00000352845.3

PKP1-202, Transcript of plakophilin 1, humanhuman

TSL 5 BASIC

Gene PKP1, Length 2,244 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP1-202ENST00000352845 CDC25BP30305 580 aa12.54□□□□□ -0.4
PKP1-202ENST00000352845 PRKAR2BP31323 418 aa12.54□□□□□ -0.4
PKP1-202ENST00000352845 FILIP1Q7Z7B0 1213 aa12.54□□□□□ -0.4
PKP1-202ENST00000352845 SUGP1Q8IWZ8 645 aaKnown RBP12.54□□□□□ -0.4
PKP1-202ENST00000352845 PHACTR3Q96KR7 559 aa12.54□□□□□ -0.4
PKP1-202ENST00000352845 ATP6V1DQ9Y5K8 247 aa12.54□□□□□ -0.4
PKP1-202ENST00000352845 SRPK2P78362 688 aaKnown RBP12.54□□□□□ -0.4
PKP1-202ENST00000352845 ZNF592Q92610 1267 aa12.54□□□□□ -0.4
PKP1-202ENST00000352845 TMX1Q9H3N1 280 aa12.54□□□□□ -0.4
PKP1-202ENST00000352845 STK26Q9P289 416 aa12.54□□□□□ -0.4
PKP1-202ENST00000352845 SMARCA5O60264 1052 aaPredicted RBP12.53□□□□□ -0.4
PKP1-202ENST00000352845 GRIPAP1Q4V328 841 aa12.53□□□□□ -0.4
PKP1-202ENST00000352845 RPAINQ86UA6 219 aa12.53□□□□□ -0.4
PKP1-202ENST00000352845 DRC7Q8IY82 874 aa12.53□□□□□ -0.4
PKP1-202ENST00000352845 UBXN6Q9BZV1 441 aa12.53□□□□□ -0.4
PKP1-202ENST00000352845 MED4Q9NPJ6 270 aa12.53□□□□□ -0.4
PKP1-202ENST00000352845 ERC2O15083 957 aa12.53□□□□□ -0.4
PKP1-202ENST00000352845 ZRANB2O95218 330 aaKnown RBP eCLIP12.53□□□□□ -0.4
PKP1-202ENST00000352845 GSCP56915 257 aaPredicted RBP12.53□□□□□ -0.4
PKP1-202ENST00000352845 TMCO3Q6UWJ1 677 aa12.53□□□□□ -0.4
PKP1-202ENST00000352845 PLA2G4DQ86XP0 818 aa12.53□□□□□ -0.4
PKP1-202ENST00000352845 C16orf71Q8IYS4 520 aaPredicted RBP12.53□□□□□ -0.4
PKP1-202ENST00000352845 EXOC4Q96A65 974 aa12.53□□□□□ -0.4
PKP1-202ENST00000352845 DCTPP1Q9H773 170 aa12.53□□□□□ -0.4
PKP1-202ENST00000352845 ALKQ9UM73 1620 aa12.53□□□□□ -0.4
PKP1-202ENST00000352845 RTL1A6NKG5 1358 aa12.52□□□□□ -0.4
PKP1-202ENST00000352845 TPM1P09493 284 aa12.52□□□□□ -0.41
PKP1-202ENST00000352845 NEK4P51957 841 aa12.52□□□□□ -0.41
PKP1-202ENST00000352845 GYS2P54840 703 aa12.52□□□□□ -0.41
PKP1-202ENST00000352845 ANAPC15P60006 121 aa12.52□□□□□ -0.41
PKP1-202ENST00000352845 LRMPQ12912 555 aa12.52□□□□□ -0.41
PKP1-202ENST00000352845 NFE2L2Q16236 605 aa12.52□□□□□ -0.41
PKP1-202ENST00000352845 OTUD7AQ8TE49 926 aaPredicted RBP12.52□□□□□ -0.41
PKP1-202ENST00000352845 PPM1EQ8WY54 764 aa12.52□□□□□ -0.41
PKP1-202ENST00000352845 L2HGDHQ9H9P8 463 aa12.52□□□□□ -0.41
PKP1-202ENST00000352845 MBIPQ9NS73 344 aa12.52□□□□□ -0.41
PKP1-202ENST00000352845 ERBB3P21860 1342 aa12.52□□□□□ -0.41
PKP1-202ENST00000352845 RIMS2Q9UQ26 1411 aa12.52□□□□□ -0.41
PKP1-202ENST00000352845 PRR29P0C7W0 189 aa12.52□□□□□ -0.41
PKP1-202ENST00000352845 FBLN1P23142 703 aa12.52□□□□□ -0.41
PKP1-202ENST00000352845 MCCP23508 829 aa12.52□□□□□ -0.41
PKP1-202ENST00000352845 CLCN6P51797 869 aa12.52□□□□□ -0.41
PKP1-202ENST00000352845 ZNF75DP51815 510 aa12.52□□□□□ -0.41
PKP1-202ENST00000352845 HSP90AB3PQ58FF7 597 aa12.52□□□□□ -0.41
PKP1-202ENST00000352845 GDPD2Q9HCC8 539 aa12.52□□□□□ -0.41
PKP1-202ENST00000352845 TERF2IPQ9NYB0 399 aa12.52□□□□□ -0.41
PKP1-202ENST00000352845 ATP10DQ9P241 1426 aa12.51□□□□□ -0.41
PKP1-202ENST00000352845 ELL2O00472 640 aaPredicted RBP12.51□□□□□ -0.41
PKP1-202ENST00000352845 GIMAP6Q6P9H5 292 aa12.51□□□□□ -0.41
PKP1-202ENST00000352845 GPATCH11Q8N954 259 aa12.51□□□□□ -0.41
PKP1-202ENST00000352845 ABCF1Q8NE71 845 aaKnown RBP eCLIP12.51□□□□□ -0.41
PKP1-202ENST00000352845 SMARCE1Q969G3 411 aa12.51□□□□□ -0.41
PKP1-202ENST00000352845 CXorf56Q9H5V9 222 aa12.51□□□□□ -0.41
PKP1-202ENST00000352845 LCMT1Q9UIC8 334 aa12.51□□□□□ -0.41
PKP1-202ENST00000352845 YTHDC2Q9H6S0 1430 aaKnown RBP12.51□□□□□ -0.41
PKP1-202ENST00000352845 C8orf58Q8NAV2 365 aa12.5□□□□□ -0.41
PKP1-202ENST00000352845 CEP89Q96ST8 783 aa12.5□□□□□ -0.41
PKP1-202ENST00000352845 DLG5Q8TDM6 1919 aa12.5□□□□□ -0.41
PKP1-202ENST00000352845 RGS12O14924 1447 aa12.5□□□□□ -0.41
PKP1-202ENST00000352845 IL17RAQ96F46 866 aa12.5□□□□□ -0.41
PKP1-202ENST00000352845 DRC1Q96MC2 740 aa12.5□□□□□ -0.41
PKP1-202ENST00000352845 SRCIN1Q9C0H9 1055 aa12.5□□□□□ -0.41
PKP1-202ENST00000352845 NOL12Q9UGY1 213 aaKnown RBP eCLIP12.5□□□□□ -0.41
PKP1-202ENST00000352845 KIF24Q5T7B8 1368 aa12.5□□□□□ -0.41
PKP1-202ENST00000352845 MINK1Q8N4C8 1332 aaPredicted RBP12.49□□□□□ -0.41
PKP1-202ENST00000352845 SETD1AO15047 1707 aaKnown RBP12.49□□□□□ -0.41
PKP1-202ENST00000352845 PATL2C9JE40 543 aaKnown RBP12.49□□□□□ -0.41
PKP1-202ENST00000352845 CAVIN2O95810 425 aa12.49□□□□□ -0.41
PKP1-202ENST00000352845 ACTN2P35609 894 aa12.49□□□□□ -0.41
PKP1-202ENST00000352845 GNAI1P63096 354 aa12.49□□□□□ -0.41
PKP1-202ENST00000352845 MCTP2Q6DN12 878 aa12.49□□□□□ -0.41
PKP1-202ENST00000352845 EGFL6Q8IUX8 553 aa12.49□□□□□ -0.41
PKP1-202ENST00000352845 CNKSR2Q8WXI2 1034 aa12.49□□□□□ -0.41
PKP1-202ENST00000352845 TNRQ92752 1358 aa12.49□□□□□ -0.41
PKP1-202ENST00000352845 MAP2P11137 1827 aaKnown RBP12.49□□□□□ -0.41
PKP1-202ENST00000352845 POLR3GO15318 223 aaPredicted RBP12.49□□□□□ -0.41
PKP1-202ENST00000352845 HMOX1P09601 288 aa12.49□□□□□ -0.41
PKP1-202ENST00000352845 TWISTNBQ3B726 338 aaPredicted RBP12.49□□□□□ -0.41
PKP1-202ENST00000352845 NBPF20Q3BBV1 942 aa12.49□□□□□ -0.41
PKP1-202ENST00000352845 TDRD7Q8NHU6 1098 aaKnown RBP12.49□□□□□ -0.41
PKP1-202ENST00000352845 CACTINQ8WUQ7 758 aaKnown RBP12.49□□□□□ -0.41
PKP1-202ENST00000352845 TRIM5Q9C035 493 aa12.49□□□□□ -0.41
PKP1-202ENST00000352845 AATKQ6ZMQ8 1374 aa12.48□□□□□ -0.41
PKP1-202ENST00000352845 NRXN3Q9Y4C0 1643 aa12.48□□□□□ -0.41
PKP1-202ENST00000352845 CCDC196A0A1B0GTZ2 297 aa12.48□□□□□ -0.41
PKP1-202ENST00000352845 RPS6KA5O75582 802 aa12.48□□□□□ -0.41
PKP1-202ENST00000352845 CPP00450 1065 aa12.48□□□□□ -0.41
PKP1-202ENST00000352845 ZSCAN22P10073 491 aaPredicted RBP12.48□□□□□ -0.41
PKP1-202ENST00000352845 SDSP20132 328 aa12.48□□□□□ -0.41
PKP1-202ENST00000352845 TRDNQ13061 729 aa12.48□□□□□ -0.41
PKP1-202ENST00000352845 LEKR1Q6ZMV7 388 aa12.48□□□□□ -0.41
PKP1-202ENST00000352845 API5Q9BZZ5 524 aaKnown RBP12.48□□□□□ -0.41
PKP1-202ENST00000352845 TOMM22Q9NS69 142 aa12.48□□□□□ -0.41
PKP1-202ENST00000352845 CLIP2Q9UDT6 1046 aa12.48□□□□□ -0.41
PKP1-202ENST00000352845 ATP6V1AP38606 617 aa12.47□□□□□ -0.41
PKP1-202ENST00000352845 CEBPAP49715 358 aaPredicted RBP12.47□□□□□ -0.41
PKP1-202ENST00000352845 TSGA10IPQ3SY00 556 aa12.47□□□□□ -0.41
PKP1-202ENST00000352845 PACS2Q86VP3 889 aa12.47□□□□□ -0.41
PKP1-202ENST00000352845 LRRC8AQ8IWT6 810 aa12.47□□□□□ -0.41
PKP1-202ENST00000352845 ANKRD44Q8N8A2 993 aa12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms