RNA–Protein interactions for RNA: ENST00000351691.9

TRAF3-202, Transcript of TNF receptor associated factor 3, humanhuman

TSL 1 (best) BASIC

Gene TRAF3, Length 2,239 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3-202ENST00000351691 FAM200AQ8TCP9 573 aa17.81■□□□□ 0.44
TRAF3-202ENST00000351691 EYA1Q99502 592 aa17.81■□□□□ 0.44
TRAF3-202ENST00000351691 STAP2Q9UGK3 403 aa17.81■□□□□ 0.44
TRAF3-202ENST00000351691 ANO2Q9NQ90 1003 aa17.8■□□□□ 0.44
TRAF3-202ENST00000351691 GIMAP6Q6P9H5 292 aa17.8■□□□□ 0.44
TRAF3-202ENST00000351691 KDM4FA0A1W2PPD8 638 aa17.79■□□□□ 0.44
TRAF3-202ENST00000351691 KCNA6P17658 529 aa17.79■□□□□ 0.44
TRAF3-202ENST00000351691 CCDC112Q8NEF3 446 aa17.79■□□□□ 0.44
TRAF3-202ENST00000351691 NPHP4O75161 1426 aaPredicted RBP17.79■□□□□ 0.44
TRAF3-202ENST00000351691 CACNA1FO60840 1977 aa17.79■□□□□ 0.44
TRAF3-202ENST00000351691 PDIA4P13667 645 aaKnown RBP17.79■□□□□ 0.44
TRAF3-202ENST00000351691 ZNF397Q8NF99 534 aaPredicted RBP17.79■□□□□ 0.44
TRAF3-202ENST00000351691 MEIS3Q99687 375 aa17.79■□□□□ 0.44
TRAF3-202ENST00000351691 IGSF3O75054 1194 aa17.78■□□□□ 0.44
TRAF3-202ENST00000351691 TNNT1P13805 278 aa17.78■□□□□ 0.44
TRAF3-202ENST00000351691 SYT1P21579 422 aa17.78■□□□□ 0.44
TRAF3-202ENST00000351691 PTGS1P23219 599 aa17.78■□□□□ 0.44
TRAF3-202ENST00000351691 PLCB2Q00722 1185 aa17.78■□□□□ 0.44
TRAF3-202ENST00000351691 FOXD4L6Q3SYB3 417 aaPredicted RBP17.78■□□□□ 0.44
TRAF3-202ENST00000351691 FOXD4L3Q6VB84 417 aaPredicted RBP17.78■□□□□ 0.44
TRAF3-202ENST00000351691 SPC24Q8NBT2 197 aa17.78■□□□□ 0.44
TRAF3-202ENST00000351691 STK31Q9BXU1 1019 aa17.78■□□□□ 0.44
TRAF3-202ENST00000351691 NAP1L2Q9ULW6 460 aaPredicted RBP17.78■□□□□ 0.44
TRAF3-202ENST00000351691 MARF1Q9Y4F3 1742 aaKnown RBP17.78■□□□□ 0.44
TRAF3-202ENST00000351691 APBB1O00213 710 aa17.78■□□□□ 0.44
TRAF3-202ENST00000351691 SLFNL1Q499Z3 407 aa17.78■□□□□ 0.44
TRAF3-202ENST00000351691 RBM33Q96EV2 1170 aaKnown RBP17.78■□□□□ 0.44
TRAF3-202ENST00000351691 TIGD1Q96MW7 591 aa17.78■□□□□ 0.44
TRAF3-202ENST00000351691 TTC14Q96N46 770 aa17.78■□□□□ 0.44
TRAF3-202ENST00000351691 CALCOCO1Q9P1Z2 691 aa17.78■□□□□ 0.44
TRAF3-202ENST00000351691 CCDC30Q5VVM6 783 aa17.77■□□□□ 0.44
TRAF3-202ENST00000351691 NOL8Q76FK4 1167 aaKnown RBP17.77■□□□□ 0.44
TRAF3-202ENST00000351691 N4BP2Q86UW6 1770 aaPredicted RBP17.77■□□□□ 0.44
TRAF3-202ENST00000351691 GNAT3A8MTJ3 354 aa17.76■□□□□ 0.43
TRAF3-202ENST00000351691 FOXO3O43524 673 aa17.76■□□□□ 0.43
TRAF3-202ENST00000351691 LIMCH1Q9UPQ0 1083 aa17.76■□□□□ 0.43
TRAF3-202ENST00000351691 FAM208AQ9UK61 1670 aaKnown RBP17.76■□□□□ 0.43
TRAF3-202ENST00000351691 SOX12O15370 315 aa17.76■□□□□ 0.43
TRAF3-202ENST00000351691 NLRP6P59044 892 aa17.76■□□□□ 0.43
TRAF3-202ENST00000351691 UPF3BQ9BZI7 483 aaKnown RBP17.76■□□□□ 0.43
TRAF3-202ENST00000351691 NWD1Q149M9 1564 aa17.76■□□□□ 0.43
TRAF3-202ENST00000351691 GNAI2P04899 355 aa17.75■□□□□ 0.43
TRAF3-202ENST00000351691 CDC25BP30305 580 aa17.75■□□□□ 0.43
TRAF3-202ENST00000351691 HOXC9P31274 260 aa17.75■□□□□ 0.43
TRAF3-202ENST00000351691 HSPA2P54652 639 aa17.75■□□□□ 0.43
TRAF3-202ENST00000351691 PLA2G4DQ86XP0 818 aa17.75■□□□□ 0.43
TRAF3-202ENST00000351691 LRRCC1Q9C099 1032 aa17.75■□□□□ 0.43
TRAF3-202ENST00000351691 CCDC171Q6TFL3 1326 aa17.75■□□□□ 0.43
TRAF3-202ENST00000351691 FIBPO43427 364 aa17.75■□□□□ 0.43
TRAF3-202ENST00000351691 GNAI3P08754 354 aa17.75■□□□□ 0.43
TRAF3-202ENST00000351691 CDK11BP21127 795 aaKnown RBP17.75■□□□□ 0.43
TRAF3-202ENST00000351691 IRX5P78411 483 aaPredicted RBP17.75■□□□□ 0.43
TRAF3-202ENST00000351691 CCDC186Q7Z3E2 898 aa17.75■□□□□ 0.43
TRAF3-202ENST00000351691 DNAJC2Q99543 621 aaKnown RBP17.75■□□□□ 0.43
TRAF3-202ENST00000351691 SMC3Q9UQE7 1217 aa17.75■□□□□ 0.43
TRAF3-202ENST00000351691 PXDNLA1KZ92 1463 aa17.74■□□□□ 0.43
TRAF3-202ENST00000351691 MAP3K11Q16584 847 aa17.74■□□□□ 0.43
TRAF3-202ENST00000351691 RNF20Q5VTR2 975 aa17.74■□□□□ 0.43
TRAF3-202ENST00000351691 ZSCAN25Q6NSZ9 544 aa17.74■□□□□ 0.43
TRAF3-202ENST00000351691 G2E3Q7L622 706 aa17.74■□□□□ 0.43
TRAF3-202ENST00000351691 ELP1O95163 1332 aa17.74■□□□□ 0.43
TRAF3-202ENST00000351691 MAP3K5Q99683 1374 aa17.74■□□□□ 0.43
TRAF3-202ENST00000351691 NEMFO60524 1076 aa17.74■□□□□ 0.43
TRAF3-202ENST00000351691 TSPYL1Q9H0U9 437 aa17.74■□□□□ 0.43
TRAF3-202ENST00000351691 MIS18AQ9NYP9 233 aa17.74■□□□□ 0.43
TRAF3-202ENST00000351691 MRVI1Q9Y6F6 885 aa17.74■□□□□ 0.43
TRAF3-202ENST00000351691 TULP2O00295 520 aa17.73■□□□□ 0.43
TRAF3-202ENST00000351691 ZNF75DP51815 510 aa17.73■□□□□ 0.43
TRAF3-202ENST00000351691 TDRD7Q8NHU6 1098 aaKnown RBP17.73■□□□□ 0.43
TRAF3-202ENST00000351691 C16orf45Q96MC5 204 aaPredicted RBP17.73■□□□□ 0.43
TRAF3-202ENST00000351691 KCNJ4P48050 445 aa17.72■□□□□ 0.43
TRAF3-202ENST00000351691 TYRO3Q06418 890 aa17.72■□□□□ 0.43
TRAF3-202ENST00000351691 RAD50Q92878 1312 aa17.72■□□□□ 0.43
TRAF3-202ENST00000351691 TAF7Q15545 349 aaPredicted RBP17.72■□□□□ 0.43
TRAF3-202ENST00000351691 CEP135Q66GS9 1140 aa17.72■□□□□ 0.43
TRAF3-202ENST00000351691 CHMP4AQ9BY43 222 aa17.72■□□□□ 0.43
TRAF3-202ENST00000351691 MTMR6Q9Y217 621 aa17.72■□□□□ 0.43
TRAF3-202ENST00000351691 STRCP1A6NGW2 1772 aa17.72■□□□□ 0.43
TRAF3-202ENST00000351691 TRIM6-TRIM34B2RNG4 842 aa17.71■□□□□ 0.43
TRAF3-202ENST00000351691 CAVIN2O95810 425 aa17.71■□□□□ 0.43
TRAF3-202ENST00000351691 RBM43Q6ZSC3 357 aaKnown RBP17.71■□□□□ 0.43
TRAF3-202ENST00000351691 RILPL2Q969X0 211 aa17.71■□□□□ 0.43
TRAF3-202ENST00000351691 ERO1AQ96HE7 468 aa17.71■□□□□ 0.43
TRAF3-202ENST00000351691 ZSCAN31Q96LW9 406 aaPredicted RBP17.71■□□□□ 0.43
TRAF3-202ENST00000351691 FLIIQ13045 1269 aa17.71■□□□□ 0.43
TRAF3-202ENST00000351691 SLC4A10Q6U841 1118 aa17.71■□□□□ 0.43
TRAF3-202ENST00000351691 NUP62CLQ9H1M0 184 aa17.71■□□□□ 0.43
TRAF3-202ENST00000351691 AK2P54819 239 aa17.7■□□□□ 0.42
TRAF3-202ENST00000351691 ATP8B2P98198 1209 aa17.7■□□□□ 0.42
TRAF3-202ENST00000351691 TPD52L1Q16890 204 aaPredicted RBP17.7■□□□□ 0.42
TRAF3-202ENST00000351691 RUFY3Q7L099 469 aa17.7■□□□□ 0.42
TRAF3-202ENST00000351691 SH2B1Q9NRF2 756 aaPredicted RBP17.7■□□□□ 0.42
TRAF3-202ENST00000351691 KCND1Q9NSA2 647 aa17.7■□□□□ 0.42
TRAF3-202ENST00000351691 SNX14Q9Y5W7 946 aa17.7■□□□□ 0.42
TRAF3-202ENST00000351691 RBM6P78332 1123 aaKnown RBP17.7■□□□□ 0.42
TRAF3-202ENST00000351691 DNM1Q05193 864 aaKnown RBP17.7■□□□□ 0.42
TRAF3-202ENST00000351691 KMT5BQ4FZB7 885 aa17.7■□□□□ 0.42
TRAF3-202ENST00000351691 F6X3S4 739 aa17.69■□□□□ 0.42
TRAF3-202ENST00000351691 CBX8Q9HC52 389 aa17.69■□□□□ 0.42
TRAF3-202ENST00000351691 LRMPQ12912 555 aa17.68■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms