RNA–Protein interactions for RNA: ENST00000350498.7

PDAP1-201, Transcript of PDGFA associated protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDAP1, Length 2,546 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDAP1-201ENST00000350498 TPRNQ4KMQ1 711 aa20.12■□□□□ 0.81
PDAP1-201ENST00000350498 ZNF790Q6PG37 636 aa20.12■□□□□ 0.81
PDAP1-201ENST00000350498 UBE2Q2Q8WVN8 375 aa20.12■□□□□ 0.81
PDAP1-201ENST00000350498 TLR7Q9NYK1 1049 aaKnown RBP20.12■□□□□ 0.81
PDAP1-201ENST00000350498 USP16Q9Y5T5 823 aa20.12■□□□□ 0.81
PDAP1-201ENST00000350498 PHRF1Q9P1Y6 1649 aaKnown RBP20.12■□□□□ 0.81
PDAP1-201ENST00000350498 SYCE3A1L190 88 aa20.12■□□□□ 0.81
PDAP1-201ENST00000350498 ZNF496Q96IT1 587 aaPredicted RBP20.12■□□□□ 0.81
PDAP1-201ENST00000350498 CCDC8Q9H0W5 538 aaPredicted RBP20.12■□□□□ 0.81
PDAP1-201ENST00000350498 NCAPD2Q15021 1401 aa20.11■□□□□ 0.81
PDAP1-201ENST00000350498 SGSM2O43147 1006 aa20.11■□□□□ 0.81
PDAP1-201ENST00000350498 CSB-PGBD3P0DP91 1061 aa20.11■□□□□ 0.81
PDAP1-201ENST00000350498 EPHA10Q5JZY3 1008 aa20.11■□□□□ 0.81
PDAP1-201ENST00000350498 KDM6AO15550 1401 aaPredicted RBP20.11■□□□□ 0.81
PDAP1-201ENST00000350498 RAPGEF4Q8WZA2 1011 aa20.11■□□□□ 0.81
PDAP1-201ENST00000350498 GDPD2Q9HCC8 539 aa20.11■□□□□ 0.81
PDAP1-201ENST00000350498 CWC22Q9HCG8 908 aaKnown RBP20.11■□□□□ 0.81
PDAP1-201ENST00000350498 SASH1O94885 1247 aa20.1■□□□□ 0.81
PDAP1-201ENST00000350498 HSPA4P34932 840 aa20.1■□□□□ 0.81
PDAP1-201ENST00000350498 PTH1RQ03431 593 aa20.1■□□□□ 0.81
PDAP1-201ENST00000350498 LSG1Q9H089 658 aaKnown RBP20.1■□□□□ 0.81
PDAP1-201ENST00000350498 MCCP23508 829 aa20.1■□□□□ 0.81
PDAP1-201ENST00000350498 RNF214Q8ND24 703 aa20.1■□□□□ 0.81
PDAP1-201ENST00000350498 XAGE3Q8WTP9 111 aa20.1■□□□□ 0.81
PDAP1-201ENST00000350498 SNX14Q9Y5W7 946 aa20.1■□□□□ 0.81
PDAP1-201ENST00000350498 MEGF6O75095 1541 aa20.1■□□□□ 0.81
PDAP1-201ENST00000350498 GRM8O00222 908 aa20.09■□□□□ 0.81
PDAP1-201ENST00000350498 COPS6Q7L5N1 327 aa20.09■□□□□ 0.81
PDAP1-201ENST00000350498 RIC3Q7Z5B4 369 aa20.09■□□□□ 0.81
PDAP1-201ENST00000350498 AACSQ86V21 672 aa20.09■□□□□ 0.81
PDAP1-201ENST00000350498 PHKG2P15735 406 aa20.09■□□□□ 0.81
PDAP1-201ENST00000350498 TMEM94Q12767 1356 aa20.09■□□□□ 0.81
PDAP1-201ENST00000350498 NPHP3Q7Z494 1330 aa20.09■□□□□ 0.81
PDAP1-201ENST00000350498 EAF2Q96CJ1 260 aaPredicted RBP20.09■□□□□ 0.81
PDAP1-201ENST00000350498 SLC52A2Q9HAB3 445 aa20.09■□□□□ 0.81
PDAP1-201ENST00000350498 DDX21Q9NR30 783 aaKnown RBP eCLIP20.09■□□□□ 0.81
PDAP1-201ENST00000350498 AOX1Q06278 1338 aa20.08■□□□□ 0.81
PDAP1-201ENST00000350498 CYP27B1O15528 508 aa20.08■□□□□ 0.81
PDAP1-201ENST00000350498 HSPA2P54652 639 aa20.08■□□□□ 0.81
PDAP1-201ENST00000350498 CNTROBQ8N137 903 aa20.08■□□□□ 0.8
PDAP1-201ENST00000350498 CLASRPQ8N2M8 674 aaKnown RBP20.08■□□□□ 0.8
PDAP1-201ENST00000350498 ANP32BQ92688 251 aaKnown RBP20.08■□□□□ 0.8
PDAP1-201ENST00000350498 HYPKQ9NX55 129 aa20.08■□□□□ 0.8
PDAP1-201ENST00000350498 ATF3P18847 181 aa20.07■□□□□ 0.8
PDAP1-201ENST00000350498 MTX1Q13505 466 aa20.07■□□□□ 0.8
PDAP1-201ENST00000350498 CUL4AQ13619 759 aa20.07■□□□□ 0.8
PDAP1-201ENST00000350498 MYD88Q99836 296 aa20.07■□□□□ 0.8
PDAP1-201ENST00000350498 ADCK5Q3MIX3 580 aa20.07■□□□□ 0.8
PDAP1-201ENST00000350498 ZSCAN30Q86W11 494 aa20.07■□□□□ 0.8
PDAP1-201ENST00000350498 LINS1Q8NG48 757 aa20.07■□□□□ 0.8
PDAP1-201ENST00000350498 NDUFB9Q9Y6M9 179 aa20.07■□□□□ 0.8
PDAP1-201ENST00000350498 ALDH1L1O75891 902 aa20.06■□□□□ 0.8
PDAP1-201ENST00000350498 EDC3Q96F86 508 aaKnown RBP20.06■□□□□ 0.8
PDAP1-201ENST00000350498 SIPA1L3O60292 1781 aaPredicted RBP20.06■□□□□ 0.8
PDAP1-201ENST00000350498 C5P01031 1676 aa20.06■□□□□ 0.8
PDAP1-201ENST00000350498 RAD50Q92878 1312 aa20.06■□□□□ 0.8
PDAP1-201ENST00000350498 CHGBP05060 677 aa20.06■□□□□ 0.8
PDAP1-201ENST00000350498 FAM227BQ96M60 508 aa20.06■□□□□ 0.8
PDAP1-201ENST00000350498 ATP5J2-PTCD1G3V325 749 aa20.05■□□□□ 0.8
PDAP1-201ENST00000350498 PTCD1O75127 700 aaKnown RBP20.05■□□□□ 0.8
PDAP1-201ENST00000350498 IFIT2P09913 472 aaKnown RBP20.05■□□□□ 0.8
PDAP1-201ENST00000350498 TATP17735 454 aaPredicted RBP20.05■□□□□ 0.8
PDAP1-201ENST00000350498 ANAPC15P60006 121 aa20.05■□□□□ 0.8
PDAP1-201ENST00000350498 LARGE1O95461 756 aa20.05■□□□□ 0.8
PDAP1-201ENST00000350498 KIAA1211Q6ZU35 1233 aa20.05■□□□□ 0.8
PDAP1-201ENST00000350498 EIF2AK3Q9NZJ5 1116 aaKnown RBP20.05■□□□□ 0.8
PDAP1-201ENST00000350498 AK2P54819 239 aa20.04■□□□□ 0.8
PDAP1-201ENST00000350498 BOLA2Q9H3K6 86 aa20.04■□□□□ 0.8
PDAP1-201ENST00000350498 ECHDC1Q9NTX5 307 aa20.04■□□□□ 0.8
PDAP1-201ENST00000350498 MST1RQ04912 1400 aa20.04■□□□□ 0.8
PDAP1-201ENST00000350498 GADD45BO75293 160 aaPredicted RBP20.04■□□□□ 0.8
PDAP1-201ENST00000350498 STRCP1A6NGW2 1772 aa20.03■□□□□ 0.8
PDAP1-201ENST00000350498 NEURL1BA8MQ27 555 aa20.03■□□□□ 0.8
PDAP1-201ENST00000350498 GLRX3O76003 335 aaKnown RBP20.03■□□□□ 0.8
PDAP1-201ENST00000350498 BRD1O95696 1058 aa20.03■□□□□ 0.8
PDAP1-201ENST00000350498 MPNDQ8N594 471 aa20.03■□□□□ 0.8
PDAP1-201ENST00000350498 TCHHQ07283 1943 aa20.03■□□□□ 0.8
PDAP1-201ENST00000350498 PRPF40BQ6NWY9 871 aaKnown RBP20.03■□□□□ 0.8
PDAP1-201ENST00000350498 RUFY3Q7L099 469 aa20.03■□□□□ 0.8
PDAP1-201ENST00000350498 DIAPH3Q9NSV4 1193 aa20.03■□□□□ 0.8
PDAP1-201ENST00000350498 CCDC9Q9Y3X0 531 aaKnown RBP20.03■□□□□ 0.8
PDAP1-201ENST00000350498 ALS2Q96Q42 1657 aa20.02■□□□□ 0.8
PDAP1-201ENST00000350498 CAMTA1Q9Y6Y1 1673 aa20.02■□□□□ 0.8
PDAP1-201ENST00000350498 MSNP26038 577 aaKnown RBP20.02■□□□□ 0.8
PDAP1-201ENST00000350498 HSP90AA2PQ14568 343 aaPredicted RBP20.02■□□□□ 0.8
PDAP1-201ENST00000350498 HSP90AB4PQ58FF6 505 aa20.02■□□□□ 0.8
PDAP1-201ENST00000350498 TAF6LQ9Y6J9 622 aa20.02■□□□□ 0.8
PDAP1-201ENST00000350498 LRP10Q7Z4F1 713 aa20.02■□□□□ 0.79
PDAP1-201ENST00000350498 CASTP20810 708 aaKnown RBP20.01■□□□□ 0.79
PDAP1-201ENST00000350498 GCKRQ14397 625 aa20.01■□□□□ 0.79
PDAP1-201ENST00000350498 TTC14Q96N46 770 aa20.01■□□□□ 0.79
PDAP1-201ENST00000350498 USP42Q9H9J4 1324 aaKnown RBP20.01■□□□□ 0.79
PDAP1-201ENST00000350498 G3BP1Q13283 466 aaKnown RBP eCLIP20.01■□□□□ 0.79
PDAP1-201ENST00000350498 LRSAM1Q6UWE0 723 aa20.01■□□□□ 0.79
PDAP1-201ENST00000350498 TTC41PQ6P2S7 1318 aa20■□□□□ 0.79
PDAP1-201ENST00000350498 DDX58O95786 925 aaKnown RBP20■□□□□ 0.79
PDAP1-201ENST00000350498 IFNL2Q8IZJ0 200 aa20■□□□□ 0.79
PDAP1-201ENST00000350498 TCEANC2Q96MN5 208 aa20■□□□□ 0.79
PDAP1-201ENST00000350498 MCM2P49736 904 aa19.99■□□□□ 0.79
PDAP1-201ENST00000350498 NMIQ13287 307 aaPredicted RBP19.99■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 60.5 ms