RNA–Protein interactions for RNA: ENST00000350028.4

SAMM50-201, Transcript of SAMM50 sorting and assembly machinery component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SAMM50, Length 1,717 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SAMM50-201ENST00000350028 OS9Q13438 667 aaPredicted RBP20.44■□□□□ 0.86
SAMM50-201ENST00000350028 RILPL2Q969X0 211 aa20.44■□□□□ 0.86
SAMM50-201ENST00000350028 SUCLG2Q96I99 432 aa20.44■□□□□ 0.86
SAMM50-201ENST00000350028 ESYT1Q9BSJ8 1104 aa20.44■□□□□ 0.86
SAMM50-201ENST00000350028 NEURL1BA8MQ27 555 aa20.43■□□□□ 0.86
SAMM50-201ENST00000350028 CHMLP26374 656 aa20.43■□□□□ 0.86
SAMM50-201ENST00000350028 RBM42Q9BTD8 480 aaKnown RBP20.43■□□□□ 0.86
SAMM50-201ENST00000350028 CIZ1Q9ULV3 898 aaPredicted RBP20.43■□□□□ 0.86
SAMM50-201ENST00000350028 USP42Q9H9J4 1324 aaKnown RBP20.43■□□□□ 0.86
SAMM50-201ENST00000350028 DDIT3P35638 169 aa20.42■□□□□ 0.86
SAMM50-201ENST00000350028 STRN4Q9NRL3 753 aa20.42■□□□□ 0.86
SAMM50-201ENST00000350028 GLI3P10071 1580 aa20.42■□□□□ 0.86
SAMM50-201ENST00000350028 GCKRQ14397 625 aa20.41■□□□□ 0.86
SAMM50-201ENST00000350028 CLASRPQ8N2M8 674 aaKnown RBP20.41■□□□□ 0.86
SAMM50-201ENST00000350028 KAZALD1Q96I82 304 aa20.41■□□□□ 0.86
SAMM50-201ENST00000350028 MYD88Q99836 296 aa20.41■□□□□ 0.86
SAMM50-201ENST00000350028 TTC41PQ6P2S7 1318 aa20.41■□□□□ 0.86
SAMM50-201ENST00000350028 PI4K2BQ8TCG2 481 aa20.41■□□□□ 0.86
SAMM50-201ENST00000350028 UBR2Q8IWV8 1755 aa20.4■□□□□ 0.86
SAMM50-201ENST00000350028 EPB41L2O43491 1005 aaKnown RBP20.4■□□□□ 0.86
SAMM50-201ENST00000350028 CD2BP2O95400 341 aaKnown RBP20.4■□□□□ 0.86
SAMM50-201ENST00000350028 BICC1Q9H694 974 aaKnown RBP20.4■□□□□ 0.86
SAMM50-201ENST00000350028 SHANK3Q9BYB0 1731 aa20.4■□□□□ 0.86
SAMM50-201ENST00000350028 PLBD2Q8NHP8 589 aa20.39■□□□□ 0.86
SAMM50-201ENST00000350028 MCCP23508 829 aa20.39■□□□□ 0.85
SAMM50-201ENST00000350028 PAPPAQ13219 1627 aa20.38■□□□□ 0.85
SAMM50-201ENST00000350028 GLRX3O76003 335 aaKnown RBP20.38■□□□□ 0.85
SAMM50-201ENST00000350028 HSP90AA1P07900 732 aaKnown RBP20.38■□□□□ 0.85
SAMM50-201ENST00000350028 HSPA1LP34931 641 aa20.38■□□□□ 0.85
SAMM50-201ENST00000350028 G3BP1Q13283 466 aaKnown RBP eCLIP20.38■□□□□ 0.85
SAMM50-201ENST00000350028 GSE1Q14687 1217 aa20.38■□□□□ 0.85
SAMM50-201ENST00000350028 UNC5CLQ8IV45 518 aa20.38■□□□□ 0.85
SAMM50-201ENST00000350028 DDX54Q8TDD1 881 aaKnown RBP20.38■□□□□ 0.85
SAMM50-201ENST00000350028 COL15A1P39059 1388 aa20.38■□□□□ 0.85
SAMM50-201ENST00000350028 AK9Q5TCS8 1911 aa20.38■□□□□ 0.85
SAMM50-201ENST00000350028 CNTROBQ8N137 903 aa20.37■□□□□ 0.85
SAMM50-201ENST00000350028 GPATCH3Q96I76 525 aa20.37■□□□□ 0.85
SAMM50-201ENST00000350028 PA2G4Q9UQ80 394 aaKnown RBP20.37■□□□□ 0.85
SAMM50-201ENST00000350028 ARFGEF2Q9Y6D5 1785 aa20.37■□□□□ 0.85
SAMM50-201ENST00000350028 ST18O60284 1047 aa20.36■□□□□ 0.85
SAMM50-201ENST00000350028 KCPQ6ZWJ8 1503 aa20.36■□□□□ 0.85
SAMM50-201ENST00000350028 AFDNP55196 1824 aaKnown RBP20.36■□□□□ 0.85
SAMM50-201ENST00000350028 TNS2Q63HR2 1409 aa20.35■□□□□ 0.85
SAMM50-201ENST00000350028 IFIT2P09913 472 aaKnown RBP20.35■□□□□ 0.85
SAMM50-201ENST00000350028 PIP4K2AP48426 406 aaPredicted RBP20.35■□□□□ 0.85
SAMM50-201ENST00000350028 ANAPC15P60006 121 aa20.35■□□□□ 0.85
SAMM50-201ENST00000350028 ECHDC1Q9NTX5 307 aa20.35■□□□□ 0.85
SAMM50-201ENST00000350028 NBPF26B4DH59 902 aa20.34■□□□□ 0.85
SAMM50-201ENST00000350028 MCM4P33991 863 aa20.34■□□□□ 0.85
SAMM50-201ENST00000350028 NBPF14Q5TI25 921 aa20.34■□□□□ 0.85
SAMM50-201ENST00000350028 NBPF10Q6P3W6 841 aaKnown RBP20.34■□□□□ 0.85
SAMM50-201ENST00000350028 NBPF15Q8N660 670 aa20.34■□□□□ 0.85
SAMM50-201ENST00000350028 COL14A1Q05707 1796 aaKnown RBP20.33■□□□□ 0.85
SAMM50-201ENST00000350028 IL27Q8NEV9 243 aa20.33■□□□□ 0.85
SAMM50-201ENST00000350028 SASH1O94885 1247 aa20.33■□□□□ 0.84
SAMM50-201ENST00000350028 IL17RAQ96F46 866 aa20.33■□□□□ 0.84
SAMM50-201ENST00000350028 ANO2Q9NQ90 1003 aa20.33■□□□□ 0.84
SAMM50-201ENST00000350028 BTG4Q9NY30 223 aa20.33■□□□□ 0.84
SAMM50-201ENST00000350028 RABL6Q3YEC7 729 aaPredicted RBP20.31■□□□□ 0.84
SAMM50-201ENST00000350028 EPHA10Q5JZY3 1008 aa20.31■□□□□ 0.84
SAMM50-201ENST00000350028 AACSQ86V21 672 aa20.31■□□□□ 0.84
SAMM50-201ENST00000350028 COPRSQ9NQ92 184 aa20.31■□□□□ 0.84
SAMM50-201ENST00000350028 TMOD3Q9NYL9 352 aa20.31■□□□□ 0.84
SAMM50-201ENST00000350028 JCADQ9P266 1359 aa20.31■□□□□ 0.84
SAMM50-201ENST00000350028 A0A087WZG4 1122 aa20.3■□□□□ 0.84
SAMM50-201ENST00000350028 MAP4K4O95819 1239 aaPredicted RBP20.3■□□□□ 0.84
SAMM50-201ENST00000350028 RAB3GAP1Q15042 981 aa20.3■□□□□ 0.84
SAMM50-201ENST00000350028 SGSM2O43147 1006 aa20.3■□□□□ 0.84
SAMM50-201ENST00000350028 MCM2P49736 904 aa20.3■□□□□ 0.84
SAMM50-201ENST00000350028 TOGARAM1Q9Y4F4 1720 aa20.3■□□□□ 0.84
SAMM50-201ENST00000350028 ATP5J2-PTCD1G3V325 749 aa20.29■□□□□ 0.84
SAMM50-201ENST00000350028 PTCD1O75127 700 aaKnown RBP20.29■□□□□ 0.84
SAMM50-201ENST00000350028 A1BGP04217 495 aa20.29■□□□□ 0.84
SAMM50-201ENST00000350028 CASP7P55210 303 aa20.29■□□□□ 0.84
SAMM50-201ENST00000350028 UBE3BQ7Z3V4 1068 aa20.29■□□□□ 0.84
SAMM50-201ENST00000350028 TEX13AQ9BXU3 409 aaPredicted RBP20.29■□□□□ 0.84
SAMM50-201ENST00000350028 NUP188Q5SRE5 1749 aa20.28■□□□□ 0.84
SAMM50-201ENST00000350028 H7C1W4 665 aa20.28■□□□□ 0.84
SAMM50-201ENST00000350028 RFX5P48382 616 aaPredicted RBP20.28■□□□□ 0.84
SAMM50-201ENST00000350028 RUFY2Q8WXA3 655 aa20.28■□□□□ 0.84
SAMM50-201ENST00000350028 EAF2Q96CJ1 260 aaPredicted RBP20.28■□□□□ 0.84
SAMM50-201ENST00000350028 DISP2A7MBM2 1401 aa20.28■□□□□ 0.84
SAMM50-201ENST00000350028 LRP6O75581 1613 aa20.27■□□□□ 0.84
SAMM50-201ENST00000350028 TTLL7Q6ZT98 887 aa20.27■□□□□ 0.84
SAMM50-201ENST00000350028 VSIG10Q8N0Z9 540 aa20.27■□□□□ 0.84
SAMM50-201ENST00000350028 EVI5LQ96CN4 794 aa20.27■□□□□ 0.84
SAMM50-201ENST00000350028 CWC22Q9HCG8 908 aaKnown RBP20.27■□□□□ 0.84
SAMM50-201ENST00000350028 FOXD4L1Q9NU39 408 aa20.27■□□□□ 0.84
SAMM50-201ENST00000350028 NUTM2BA6NNL0 878 aaPredicted RBP20.27■□□□□ 0.83
SAMM50-201ENST00000350028 DDX11L8A8MPP1 907 aa20.27■□□□□ 0.83
SAMM50-201ENST00000350028 NUTM2EB1AL46 878 aaPredicted RBP20.27■□□□□ 0.83
SAMM50-201ENST00000350028 ADAMTS2O95450 1211 aa20.27■□□□□ 0.83
SAMM50-201ENST00000350028 NUTM2AQ8IVF1 878 aaPredicted RBP20.27■□□□□ 0.83
SAMM50-201ENST00000350028 CWC25Q9NXE8 425 aaPredicted RBP20.27■□□□□ 0.83
SAMM50-201ENST00000350028 HSPA4P34932 840 aa20.26■□□□□ 0.83
SAMM50-201ENST00000350028 NEK4P51957 841 aa20.26■□□□□ 0.83
SAMM50-201ENST00000350028 TNPO1Q92973 898 aaKnown RBP20.26■□□□□ 0.83
SAMM50-201ENST00000350028 GBP4Q96PP9 640 aa20.26■□□□□ 0.83
SAMM50-201ENST00000350028 SIL1Q9H173 461 aa20.26■□□□□ 0.83
SAMM50-201ENST00000350028 DIAPH3Q9NSV4 1193 aa20.26■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms