RNA–Protein interactions for RNA: ENST00000349496.9

CTNNB1-201, Transcript of catenin beta 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTNNB1, Length 3,737 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNB1-201ENST00000349496 ERO1AQ96HE7 468 aa14.33□□□□□ -0.12
CTNNB1-201ENST00000349496 CHAMP1Q96JM3 812 aa14.33□□□□□ -0.12
CTNNB1-201ENST00000349496 C1orf115Q9H7X2 142 aa14.33□□□□□ -0.12
CTNNB1-201ENST00000349496 ACTN2P35609 894 aa14.32□□□□□ -0.12
CTNNB1-201ENST00000349496 NFXL1Q6ZNB6 911 aa14.32□□□□□ -0.12
CTNNB1-201ENST00000349496 SNX21Q969T3 373 aa14.32□□□□□ -0.12
CTNNB1-201ENST00000349496 THOC1Q96FV9 657 aaKnown RBP14.32□□□□□ -0.12
CTNNB1-201ENST00000349496 TRIM5Q9C035 493 aa14.32□□□□□ -0.12
CTNNB1-201ENST00000349496 RTEL1-TNFRSF6BF6WH68 1400 aa14.32□□□□□ -0.12
CTNNB1-201ENST00000349496 ABCA6Q8N139 1617 aa14.32□□□□□ -0.12
CTNNB1-201ENST00000349496 ERLIN2O94905 339 aa14.32□□□□□ -0.12
CTNNB1-201ENST00000349496 FAM69CQ0P6D2 419 aa14.32□□□□□ -0.12
CTNNB1-201ENST00000349496 NAA25Q14CX7 972 aa14.32□□□□□ -0.12
CTNNB1-201ENST00000349496 MEX3CQ5U5Q3 659 aaKnown RBP14.32□□□□□ -0.12
CTNNB1-201ENST00000349496 CCDC186Q7Z3E2 898 aa14.32□□□□□ -0.12
CTNNB1-201ENST00000349496 KLHL33A6NCF5 533 aa14.32□□□□□ -0.12
CTNNB1-201ENST00000349496 ERCC6LQ2NKX8 1250 aa14.32□□□□□ -0.12
CTNNB1-201ENST00000349496 NKTRP30414 1462 aaKnown RBP14.31□□□□□ -0.12
CTNNB1-201ENST00000349496 SPHKAPQ2M3C7 1700 aa14.31□□□□□ -0.12
CTNNB1-201ENST00000349496 MRFAP1Q9Y605 127 aa14.31□□□□□ -0.12
CTNNB1-201ENST00000349496 MAFGO15525 162 aa14.31□□□□□ -0.12
CTNNB1-201ENST00000349496 PNMA6AP0CW24 399 aaPredicted RBP14.31□□□□□ -0.12
CTNNB1-201ENST00000349496 LIG3P49916 1009 aa14.31□□□□□ -0.12
CTNNB1-201ENST00000349496 FILIP1Q7Z7B0 1213 aa14.31□□□□□ -0.12
CTNNB1-201ENST00000349496 ITPRIPQ8IWB1 547 aa14.31□□□□□ -0.12
CTNNB1-201ENST00000349496 ACBD3Q9H3P7 528 aa14.31□□□□□ -0.12
CTNNB1-201ENST00000349496 CLNS1AP54105 237 aaKnown RBP14.31□□□□□ -0.12
CTNNB1-201ENST00000349496 ZSCAN21Q9Y5A6 473 aaPredicted RBP14.31□□□□□ -0.12
CTNNB1-201ENST00000349496 DCTN1Q14203 1278 aa14.3□□□□□ -0.12
CTNNB1-201ENST00000349496 NOL8Q76FK4 1167 aaKnown RBP14.3□□□□□ -0.12
CTNNB1-201ENST00000349496 HOMER1Q86YM7 354 aa14.3□□□□□ -0.12
CTNNB1-201ENST00000349496 CTCFLQ8NI51 663 aaPredicted RBP14.3□□□□□ -0.12
CTNNB1-201ENST00000349496 ETAA1Q9NY74 926 aa14.3□□□□□ -0.12
CTNNB1-201ENST00000349496 MROH2AA6NES4 1674 aa14.3□□□□□ -0.12
CTNNB1-201ENST00000349496 EVC2Q86UK5 1308 aa14.3□□□□□ -0.12
CTNNB1-201ENST00000349496 FYB1O15117 783 aa14.3□□□□□ -0.12
CTNNB1-201ENST00000349496 CASTP20810 708 aaKnown RBP14.3□□□□□ -0.12
CTNNB1-201ENST00000349496 RRS1Q15050 365 aaKnown RBP14.3□□□□□ -0.12
CTNNB1-201ENST00000349496 HSP90B2PQ58FF3 399 aa14.3□□□□□ -0.12
CTNNB1-201ENST00000349496 TXNDC2Q86VQ3 553 aa14.3□□□□□ -0.12
CTNNB1-201ENST00000349496 RMI1Q9H9A7 625 aa14.3□□□□□ -0.12
CTNNB1-201ENST00000349496 GDPD2Q9HCC8 539 aa14.3□□□□□ -0.12
CTNNB1-201ENST00000349496 HDAC1Q13547 482 aaPredicted RBP14.29□□□□□ -0.12
CTNNB1-201ENST00000349496 NEDD9Q14511 834 aa14.29□□□□□ -0.12
CTNNB1-201ENST00000349496 DDX11Q96FC9 970 aa14.29□□□□□ -0.12
CTNNB1-201ENST00000349496 CFAP53Q96M91 514 aa14.29□□□□□ -0.12
CTNNB1-201ENST00000349496 SH3GL3Q99963 347 aa14.29□□□□□ -0.12
CTNNB1-201ENST00000349496 CDK19Q9BWU1 502 aa14.29□□□□□ -0.12
CTNNB1-201ENST00000349496 UHRF1BP1LA0JNW5 1464 aa14.29□□□□□ -0.12
CTNNB1-201ENST00000349496 PPRC1Q5VV67 1664 aaKnown RBP14.29□□□□□ -0.12
CTNNB1-201ENST00000349496 A0A1B0GUA9 196 aa14.29□□□□□ -0.12
CTNNB1-201ENST00000349496 GSCP56915 257 aaPredicted RBP14.29□□□□□ -0.12
CTNNB1-201ENST00000349496 SWT1Q5T5J6 900 aaKnown RBP14.29□□□□□ -0.12
CTNNB1-201ENST00000349496 KIF1BPQ96EK5 621 aa14.29□□□□□ -0.12
CTNNB1-201ENST00000349496 VPS18Q9P253 973 aa14.29□□□□□ -0.12
CTNNB1-201ENST00000349496 EMILIN1Q9Y6C2 1016 aa14.29□□□□□ -0.12
CTNNB1-201ENST00000349496 PIK3C2GO75747 1445 aa14.29□□□□□ -0.12
CTNNB1-201ENST00000349496 CEP152O94986 1710 aa14.28□□□□□ -0.12
CTNNB1-201ENST00000349496 AP1G2O75843 785 aa14.28□□□□□ -0.12
CTNNB1-201ENST00000349496 SMC1AQ14683 1233 aaKnown RBP14.28□□□□□ -0.12
CTNNB1-201ENST00000349496 ZC3H12AQ5D1E8 599 aaKnown RBP14.28□□□□□ -0.12
CTNNB1-201ENST00000349496 CEP57Q86XR8 500 aa14.28□□□□□ -0.12
CTNNB1-201ENST00000349496 TMTC2Q8N394 836 aa14.28□□□□□ -0.12
CTNNB1-201ENST00000349496 SSH1Q8WYL5 1049 aa14.28□□□□□ -0.12
CTNNB1-201ENST00000349496 ANAPC4Q9UJX5 808 aa14.28□□□□□ -0.12
CTNNB1-201ENST00000349496 A0A1W2PP64 1363 aa14.28□□□□□ -0.12
CTNNB1-201ENST00000349496 ZNF518AQ6AHZ1 1483 aa14.28□□□□□ -0.12
CTNNB1-201ENST00000349496 IQGAP1P46940 1657 aa14.28□□□□□ -0.12
CTNNB1-201ENST00000349496 SUGP1Q8IWZ8 645 aaKnown RBP14.28□□□□□ -0.12
CTNNB1-201ENST00000349496 MROH1Q8NDA8 1641 aa14.28□□□□□ -0.12
CTNNB1-201ENST00000349496 RNF17Q9BXT8 1623 aaKnown RBP14.28□□□□□ -0.12
CTNNB1-201ENST00000349496 FAM83GA6ND36 823 aa14.28□□□□□ -0.12
CTNNB1-201ENST00000349496 KDM4AO75164 1064 aa14.28□□□□□ -0.12
CTNNB1-201ENST00000349496 ECEL1O95672 775 aa14.28□□□□□ -0.12
CTNNB1-201ENST00000349496 ERCC3P19447 782 aa14.28□□□□□ -0.12
CTNNB1-201ENST00000349496 LRMPQ12912 555 aa14.28□□□□□ -0.12
CTNNB1-201ENST00000349496 TBC1D22AQ8WUA7 517 aa14.28□□□□□ -0.12
CTNNB1-201ENST00000349496 PHACTR3Q96KR7 559 aa14.28□□□□□ -0.12
CTNNB1-201ENST00000349496 GNL3LQ9NVN8 582 aaKnown RBP14.28□□□□□ -0.12
CTNNB1-201ENST00000349496 PLEKHA4Q9H4M7 779 aa14.27□□□□□ -0.12
CTNNB1-201ENST00000349496 NSFL1CQ9UNZ2 370 aaKnown RBP14.27□□□□□ -0.12
CTNNB1-201ENST00000349496 INSRP06213 1382 aa14.27□□□□□ -0.12
CTNNB1-201ENST00000349496 MYOM1P52179 1685 aa14.27□□□□□ -0.13
CTNNB1-201ENST00000349496 ELF1P32519 619 aa14.27□□□□□ -0.13
CTNNB1-201ENST00000349496 CLCN6P51797 869 aa14.27□□□□□ -0.13
CTNNB1-201ENST00000349496 ANKRD45Q5TZF3 282 aa14.27□□□□□ -0.13
CTNNB1-201ENST00000349496 RINLQ6ZS11 566 aa14.27□□□□□ -0.13
CTNNB1-201ENST00000349496 ATP2B2Q01814 1243 aa14.27□□□□□ -0.13
CTNNB1-201ENST00000349496 PKP1Q13835 747 aa14.27□□□□□ -0.13
CTNNB1-201ENST00000349496 ZRSR2Q15696 482 aaKnown RBP14.27□□□□□ -0.13
CTNNB1-201ENST00000349496 CCDC27Q2M243 656 aa14.27□□□□□ -0.13
CTNNB1-201ENST00000349496 TADA2BQ86TJ2 420 aa14.27□□□□□ -0.13
CTNNB1-201ENST00000349496 ARMC2Q8NEN0 867 aa14.27□□□□□ -0.13
CTNNB1-201ENST00000349496 NOB1Q9ULX3 412 aaKnown RBP14.27□□□□□ -0.13
CTNNB1-201ENST00000349496 EXOC6BQ9Y2D4 811 aa14.27□□□□□ -0.13
CTNNB1-201ENST00000349496 NME9Q86XW9 330 aa14.26□□□□□ -0.13
CTNNB1-201ENST00000349496 KDM4CQ9H3R0 1056 aa14.26□□□□□ -0.13
CTNNB1-201ENST00000349496 ABCD1P33897 745 aa14.26□□□□□ -0.13
CTNNB1-201ENST00000349496 EFCAB13Q8IY85 973 aa14.26□□□□□ -0.13
CTNNB1-201ENST00000349496 ARL10Q8N8L6 244 aa14.26□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms