RNA–Protein interactions for RNA: ENST00000349004.5

NDRG3-201, Transcript of NDRG family member 3, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene NDRG3, Length 2,964 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDRG3-201ENST00000349004 RPS6KA4O75676 772 aa7.34□□□□□ -1.23
NDRG3-201ENST00000349004 NFE2L2Q16236 605 aa7.34□□□□□ -1.23
NDRG3-201ENST00000349004 TBC1D9BQ66K14 1250 aa7.34□□□□□ -1.23
NDRG3-201ENST00000349004 IL27Q8NEV9 243 aa7.34□□□□□ -1.23
NDRG3-201ENST00000349004 JARID2Q92833 1246 aaPredicted RBP7.34□□□□□ -1.23
NDRG3-201ENST00000349004 NPC1L1Q9UHC9 1359 aa7.34□□□□□ -1.24
NDRG3-201ENST00000349004 NBPF26B4DH59 902 aa7.33□□□□□ -1.24
NDRG3-201ENST00000349004 MS4A1P11836 297 aa7.33□□□□□ -1.24
NDRG3-201ENST00000349004 DPEP1P16444 411 aa7.33□□□□□ -1.24
NDRG3-201ENST00000349004 SSFA2P28290 1259 aa7.33□□□□□ -1.24
NDRG3-201ENST00000349004 NFIXQ14938 502 aa7.33□□□□□ -1.24
NDRG3-201ENST00000349004 HLFQ16534 295 aa7.33□□□□□ -1.24
NDRG3-201ENST00000349004 NBPF10Q6P3W6 841 aaKnown RBP7.33□□□□□ -1.24
NDRG3-201ENST00000349004 TTLL7Q6ZT98 887 aa7.33□□□□□ -1.24
NDRG3-201ENST00000349004 NUTM1Q86Y26 1132 aa7.33□□□□□ -1.24
NDRG3-201ENST00000349004 NBPF15Q8N660 670 aa7.33□□□□□ -1.24
NDRG3-201ENST00000349004 FMNL2Q96PY5 1086 aa7.33□□□□□ -1.24
NDRG3-201ENST00000349004 COG6Q9Y2V7 657 aa7.33□□□□□ -1.24
NDRG3-201ENST00000349004 VIRMAQ69YN4 1812 aaKnown RBP7.33□□□□□ -1.24
NDRG3-201ENST00000349004 DCAF8L1A6NGE4 600 aa7.33□□□□□ -1.24
NDRG3-201ENST00000349004 SEC24BO95487 1268 aa7.33□□□□□ -1.24
NDRG3-201ENST00000349004 TAF7Q15545 349 aaPredicted RBP7.33□□□□□ -1.24
NDRG3-201ENST00000349004 BCL2L12Q9HB09 334 aa7.33□□□□□ -1.24
NDRG3-201ENST00000349004 PARP3Q9Y6F1 533 aa7.33□□□□□ -1.24
NDRG3-201ENST00000349004 STARD3NLO95772 234 aa7.32□□□□□ -1.24
NDRG3-201ENST00000349004 RLBP1P12271 317 aa7.32□□□□□ -1.24
NDRG3-201ENST00000349004 SYNE4Q8N205 404 aa7.32□□□□□ -1.24
NDRG3-201ENST00000349004 FRAT1Q92837 279 aaPredicted RBP7.32□□□□□ -1.24
NDRG3-201ENST00000349004 CARMIL3Q8ND23 1372 aa7.32□□□□□ -1.24
NDRG3-201ENST00000349004 UBR3Q6ZT12 1888 aa7.32□□□□□ -1.24
NDRG3-201ENST00000349004 SCN11AQ9UI33 1791 aa7.32□□□□□ -1.24
NDRG3-201ENST00000349004 COL15A1P39059 1388 aa7.32□□□□□ -1.24
NDRG3-201ENST00000349004 DZIP3Q86Y13 1208 aaKnown RBP7.32□□□□□ -1.24
NDRG3-201ENST00000349004 WWC1Q8IX03 1113 aa7.32□□□□□ -1.24
NDRG3-201ENST00000349004 HEG1Q9ULI3 1381 aa7.32□□□□□ -1.24
NDRG3-201ENST00000349004 USP42Q9H9J4 1324 aaKnown RBP7.32□□□□□ -1.24
NDRG3-201ENST00000349004 ARHGAP27Q6ZUM4 889 aa7.32□□□□□ -1.24
NDRG3-201ENST00000349004 ZNF622Q969S3 477 aaKnown RBP eCLIP7.32□□□□□ -1.24
NDRG3-201ENST00000349004 TRIM35Q9UPQ4 493 aa7.32□□□□□ -1.24
NDRG3-201ENST00000349004 CENPQQ7L2Z9 268 aaPredicted RBP7.31□□□□□ -1.24
NDRG3-201ENST00000349004 CLUAP1Q96AJ1 413 aa7.31□□□□□ -1.24
NDRG3-201ENST00000349004 SOS1Q07889 1333 aaPredicted RBP7.31□□□□□ -1.24
NDRG3-201ENST00000349004 SLC16A10Q8TF71 515 aa7.31□□□□□ -1.24
NDRG3-201ENST00000349004 CCDC85AQ96PX6 553 aaPredicted RBP7.31□□□□□ -1.24
NDRG3-201ENST00000349004 DLG5Q8TDM6 1919 aa7.31□□□□□ -1.24
NDRG3-201ENST00000349004 KCPQ6ZWJ8 1503 aa7.31□□□□□ -1.24
NDRG3-201ENST00000349004 BRCA2P51587 3418 aa7.3□□□□□ -1.24
NDRG3-201ENST00000349004 SERPINB2P05120 415 aa7.3□□□□□ -1.24
NDRG3-201ENST00000349004 CEMIPQ8WUJ3 1361 aa7.3□□□□□ -1.24
NDRG3-201ENST00000349004 N4BP2Q86UW6 1770 aaPredicted RBP7.3□□□□□ -1.24
NDRG3-201ENST00000349004 SNRPA1P09661 255 aaKnown RBP7.3□□□□□ -1.24
NDRG3-201ENST00000349004 GTF2E1P29083 439 aaPredicted RBP7.3□□□□□ -1.24
NDRG3-201ENST00000349004 EIF4A1P60842 406 aaKnown RBP7.3□□□□□ -1.24
NDRG3-201ENST00000349004 NLGN1Q8N2Q7 840 aa7.3□□□□□ -1.24
NDRG3-201ENST00000349004 TSPYL6Q8N831 410 aa7.3□□□□□ -1.24
NDRG3-201ENST00000349004 RUNDC1Q96C34 613 aa7.3□□□□□ -1.24
NDRG3-201ENST00000349004 NIP7Q9Y221 180 aaKnown RBP eCLIP7.3□□□□□ -1.24
NDRG3-201ENST00000349004 CICQ96RK0 1608 aaPredicted RBP7.3□□□□□ -1.24
NDRG3-201ENST00000349004 CNTNAP4Q9C0A0 1308 aa7.3□□□□□ -1.24
NDRG3-201ENST00000349004 ATP5J2-PTCD1G3V325 749 aa7.29□□□□□ -1.24
NDRG3-201ENST00000349004 POLRMTO00411 1230 aaKnown RBP7.29□□□□□ -1.24
NDRG3-201ENST00000349004 GIGYF1O75420 1035 aaPredicted RBP7.29□□□□□ -1.24
NDRG3-201ENST00000349004 EIF5P55010 431 aaKnown RBP7.29□□□□□ -1.24
NDRG3-201ENST00000349004 RASSF7Q02833 373 aa7.29□□□□□ -1.24
NDRG3-201ENST00000349004 ZNF784Q8NCA9 323 aaPredicted RBP7.29□□□□□ -1.24
NDRG3-201ENST00000349004 LRP5O75197 1615 aa7.29□□□□□ -1.24
NDRG3-201ENST00000349004 CDK11BP21127 795 aaKnown RBP7.29□□□□□ -1.24
NDRG3-201ENST00000349004 FLAD1Q8NFF5 587 aa7.29□□□□□ -1.24
NDRG3-201ENST00000349004 CHPF2Q9P2E5 772 aa7.29□□□□□ -1.24
NDRG3-201ENST00000349004 RGPD3A6NKT7 1758 aaPredicted RBP7.29□□□□□ -1.24
NDRG3-201ENST00000349004 RGPD4Q7Z3J3 1758 aa7.29□□□□□ -1.24
NDRG3-201ENST00000349004 E9PSI1 815 aa7.29□□□□□ -1.24
NDRG3-201ENST00000349004 FAM161AQ3B820 660 aa7.29□□□□□ -1.24
NDRG3-201ENST00000349004 MBIPQ9NS73 344 aa7.29□□□□□ -1.24
NDRG3-201ENST00000349004 TJP1Q07157 1748 aa7.28□□□□□ -1.24
NDRG3-201ENST00000349004 C21orf2O43822 256 aa7.28□□□□□ -1.24
NDRG3-201ENST00000349004 SAMD1Q6SPF0 538 aaPredicted RBP7.28□□□□□ -1.24
NDRG3-201ENST00000349004 PHAXQ9H814 394 aaKnown RBP7.28□□□□□ -1.24
NDRG3-201ENST00000349004 NARFQ9UHQ1 456 aa7.28□□□□□ -1.24
NDRG3-201ENST00000349004 PCDHB15Q9Y5E8 787 aa7.28□□□□□ -1.24
NDRG3-201ENST00000349004 CAMTA2O94983 1202 aa7.28□□□□□ -1.24
NDRG3-201ENST00000349004 NFKBIBQ15653 356 aa7.28□□□□□ -1.24
NDRG3-201ENST00000349004 RC3H1Q5TC82 1133 aaKnown RBP7.28□□□□□ -1.24
NDRG3-201ENST00000349004 COPS6Q7L5N1 327 aa7.28□□□□□ -1.24
NDRG3-201ENST00000349004 NBPF5PQ86XG9 351 aaPredicted RBP7.28□□□□□ -1.24
NDRG3-201ENST00000349004 C8orf58Q8NAV2 365 aa7.28□□□□□ -1.24
NDRG3-201ENST00000349004 SETDB2Q96T68 719 aa7.28□□□□□ -1.24
NDRG3-201ENST00000349004 MKI67P46013 3256 aaKnown RBP7.28□□□□□ -1.24
NDRG3-201ENST00000349004 KCNA3P22001 575 aa7.27□□□□□ -1.25
NDRG3-201ENST00000349004 DHX37Q8IY37 1157 aaKnown RBP7.27□□□□□ -1.25
NDRG3-201ENST00000349004 IGSF3O75054 1194 aa7.27□□□□□ -1.25
NDRG3-201ENST00000349004 HCLS1P14317 486 aaPredicted RBP7.27□□□□□ -1.25
NDRG3-201ENST00000349004 RARSP54136 660 aaKnown RBP7.27□□□□□ -1.25
NDRG3-201ENST00000349004 HDGFL1Q5TGJ6 251 aa7.27□□□□□ -1.25
NDRG3-201ENST00000349004 PRR5LQ6MZQ0 368 aa7.27□□□□□ -1.25
NDRG3-201ENST00000349004 C3orf67Q6ZVT6 689 aa7.27□□□□□ -1.25
NDRG3-201ENST00000349004 C2CD5Q86YS7 1000 aa7.27□□□□□ -1.25
NDRG3-201ENST00000349004 XAGE3Q8WTP9 111 aa7.27□□□□□ -1.25
NDRG3-201ENST00000349004 C4AP0C0L4 1744 aa7.27□□□□□ -1.25
NDRG3-201ENST00000349004 FRAT2O75474 233 aaPredicted RBP7.26□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms