RNA–Protein interactions for RNA: ENST00000348513.10

SMARCE1-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMARCE1, Length 5,840 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-202ENST00000348513 ABCC5O15440 1437 aa12.83□□□□□ -0.36
SMARCE1-202ENST00000348513 WASLO00401 505 aaPredicted RBP12.83□□□□□ -0.36
SMARCE1-202ENST00000348513 C16orf45Q96MC5 204 aaPredicted RBP12.83□□□□□ -0.36
SMARCE1-202ENST00000348513 KRT85P78386 507 aa12.83□□□□□ -0.36
SMARCE1-202ENST00000348513 ZBTB9Q96C00 473 aa12.83□□□□□ -0.36
SMARCE1-202ENST00000348513 SPATA32Q96LK8 384 aa12.83□□□□□ -0.36
SMARCE1-202ENST00000348513 CTNNA3Q9UI47 895 aa12.83□□□□□ -0.36
SMARCE1-202ENST00000348513 FBLN1P23142 703 aa12.82□□□□□ -0.36
SMARCE1-202ENST00000348513 ZNF76P36508 570 aa12.82□□□□□ -0.36
SMARCE1-202ENST00000348513 NUCKS1Q9H1E3 243 aaKnown RBP12.82□□□□□ -0.36
SMARCE1-202ENST00000348513 HSPA4P34932 840 aa12.82□□□□□ -0.36
SMARCE1-202ENST00000348513 IMMTQ16891 758 aaKnown RBP12.82□□□□□ -0.36
SMARCE1-202ENST00000348513 PRPF40BQ6NWY9 871 aaKnown RBP12.82□□□□□ -0.36
SMARCE1-202ENST00000348513 NGLY1Q96IV0 654 aa12.82□□□□□ -0.36
SMARCE1-202ENST00000348513 TRMT112Q9UI30 125 aaKnown RBP12.82□□□□□ -0.36
SMARCE1-202ENST00000348513 NOL7Q9UMY1 257 aaKnown RBP12.82□□□□□ -0.36
SMARCE1-202ENST00000348513 MX1P20591 662 aa12.82□□□□□ -0.36
SMARCE1-202ENST00000348513 LARP1Q6PKG0 1096 aaKnown RBP12.82□□□□□ -0.36
SMARCE1-202ENST00000348513 ZBTB3Q9H5J0 574 aa12.82□□□□□ -0.36
SMARCE1-202ENST00000348513 ZNF652Q9Y2D9 606 aa12.82□□□□□ -0.36
SMARCE1-202ENST00000348513 SPATA24Q86W54 205 aa12.82□□□□□ -0.36
SMARCE1-202ENST00000348513 FAM135AQ9P2D6 1515 aa12.81□□□□□ -0.36
SMARCE1-202ENST00000348513 CCDC196A0A1B0GTZ2 297 aa12.81□□□□□ -0.36
SMARCE1-202ENST00000348513 FAM177A1Q8N128 213 aaPredicted RBP12.81□□□□□ -0.36
SMARCE1-202ENST00000348513 POLR3DP05423 398 aaPredicted RBP12.81□□□□□ -0.36
SMARCE1-202ENST00000348513 KIF1BPQ96EK5 621 aa12.81□□□□□ -0.36
SMARCE1-202ENST00000348513 CHRNA2Q15822 529 aa12.81□□□□□ -0.36
SMARCE1-202ENST00000348513 JAKMIP3Q5VZ66 844 aa12.81□□□□□ -0.36
SMARCE1-202ENST00000348513 KRT28Q7Z3Y7 464 aa12.81□□□□□ -0.36
SMARCE1-202ENST00000348513 FAM114A1Q8IWE2 563 aa12.81□□□□□ -0.36
SMARCE1-202ENST00000348513 JARID2Q92833 1246 aaPredicted RBP12.81□□□□□ -0.36
SMARCE1-202ENST00000348513 CDKL5O76039 1030 aa12.8□□□□□ -0.36
SMARCE1-202ENST00000348513 IFIT1P09914 478 aaKnown RBP12.8□□□□□ -0.36
SMARCE1-202ENST00000348513 CAVIN4Q5BKX8 364 aa12.8□□□□□ -0.36
SMARCE1-202ENST00000348513 FERMT3Q86UX7 667 aa12.8□□□□□ -0.36
SMARCE1-202ENST00000348513 POTEDQ86YR6 584 aa12.8□□□□□ -0.36
SMARCE1-202ENST00000348513 NOS1P29475 1434 aa12.8□□□□□ -0.36
SMARCE1-202ENST00000348513 UVSSAQ2YD98 709 aa12.8□□□□□ -0.36
SMARCE1-202ENST00000348513 NBPF6Q5VWK0 638 aa12.8□□□□□ -0.36
SMARCE1-202ENST00000348513 NBPF11Q86T75 865 aa12.8□□□□□ -0.36
SMARCE1-202ENST00000348513 NBPF5PQ86XG9 351 aaPredicted RBP12.8□□□□□ -0.36
SMARCE1-202ENST00000348513 CCDC83Q8IWF9 413 aa12.8□□□□□ -0.36
SMARCE1-202ENST00000348513 NBPF4Q96M43 638 aa12.8□□□□□ -0.36
SMARCE1-202ENST00000348513 CHMP4BP1P59074 171 aa12.8□□□□□ -0.36
SMARCE1-202ENST00000348513 IQCEQ6IPM2 695 aa12.8□□□□□ -0.36
SMARCE1-202ENST00000348513 CCDC82Q8N4S0 544 aa12.8□□□□□ -0.36
SMARCE1-202ENST00000348513 UPF3BQ9BZI7 483 aaKnown RBP12.8□□□□□ -0.36
SMARCE1-202ENST00000348513 FAM83GA6ND36 823 aa12.8□□□□□ -0.36
SMARCE1-202ENST00000348513 CASQ1P31415 396 aa12.8□□□□□ -0.36
SMARCE1-202ENST00000348513 MATR3P43243 847 aaKnown RBP eCLIP12.8□□□□□ -0.36
SMARCE1-202ENST00000348513 RARSP54136 660 aaKnown RBP12.8□□□□□ -0.36
SMARCE1-202ENST00000348513 ABCA10Q8WWZ4 1543 aa12.8□□□□□ -0.36
SMARCE1-202ENST00000348513 KIF5BP33176 963 aa12.8□□□□□ -0.36
SMARCE1-202ENST00000348513 SATB1Q01826 763 aa12.8□□□□□ -0.36
SMARCE1-202ENST00000348513 MRFAP1L1Q96HT8 127 aa12.8□□□□□ -0.36
SMARCE1-202ENST00000348513 STIM1Q13586 685 aa12.79□□□□□ -0.36
SMARCE1-202ENST00000348513 LARP6Q9BRS8 491 aaKnown RBP12.79□□□□□ -0.36
SMARCE1-202ENST00000348513 SEPT11Q9NVA2 429 aaKnown RBP12.79□□□□□ -0.36
SMARCE1-202ENST00000348513 IFIT5Q13325 482 aaKnown RBP12.79□□□□□ -0.36
SMARCE1-202ENST00000348513 SLC4A8Q2Y0W8 1093 aa12.79□□□□□ -0.36
SMARCE1-202ENST00000348513 AMOTQ4VCS5 1084 aa12.79□□□□□ -0.36
SMARCE1-202ENST00000348513 PPFIBP1Q86W92 1011 aa12.79□□□□□ -0.36
SMARCE1-202ENST00000348513 CCDC50Q8IVM0 306 aa12.79□□□□□ -0.36
SMARCE1-202ENST00000348513 MSL1Q68DK7 614 aa12.79□□□□□ -0.36
SMARCE1-202ENST00000348513 CRACR2BQ8N4Y2 399 aaPredicted RBP12.79□□□□□ -0.36
SMARCE1-202ENST00000348513 AKAP2Q9Y2D5 859 aa12.79□□□□□ -0.36
SMARCE1-202ENST00000348513 CAMK4Q16566 473 aa12.79□□□□□ -0.36
SMARCE1-202ENST00000348513 CEP112Q8N8E3 955 aa12.79□□□□□ -0.36
SMARCE1-202ENST00000348513 SCLT1Q96NL6 688 aa12.79□□□□□ -0.36
SMARCE1-202ENST00000348513 TMOD2Q9NZR1 351 aa12.79□□□□□ -0.36
SMARCE1-202ENST00000348513 ATP5J2-PTCD1G3V325 749 aa12.79□□□□□ -0.36
SMARCE1-202ENST00000348513 MKNK2Q9HBH9 465 aa12.79□□□□□ -0.36
SMARCE1-202ENST00000348513 SMTNL1A8MU46 457 aa12.78□□□□□ -0.36
SMARCE1-202ENST00000348513 NEMFO60524 1076 aa12.78□□□□□ -0.36
SMARCE1-202ENST00000348513 GUCY1B3Q02153 619 aa12.78□□□□□ -0.36
SMARCE1-202ENST00000348513 ICE2Q659A1 982 aa12.78□□□□□ -0.36
SMARCE1-202ENST00000348513 GRIN2AQ12879 1464 aa12.78□□□□□ -0.36
SMARCE1-202ENST00000348513 CCDC171Q6TFL3 1326 aa12.78□□□□□ -0.36
SMARCE1-202ENST00000348513 KRT32Q14532 448 aa12.78□□□□□ -0.36
SMARCE1-202ENST00000348513 A0A087WZG4 1122 aa12.78□□□□□ -0.36
SMARCE1-202ENST00000348513 PIP4K2AP48426 406 aaPredicted RBP12.78□□□□□ -0.36
SMARCE1-202ENST00000348513 IRX5P78411 483 aaPredicted RBP12.78□□□□□ -0.36
SMARCE1-202ENST00000348513 EBAG9O00559 213 aa12.77□□□□□ -0.36
SMARCE1-202ENST00000348513 ERLIN2O94905 339 aa12.77□□□□□ -0.36
SMARCE1-202ENST00000348513 ZSCAN31Q96LW9 406 aaPredicted RBP12.77□□□□□ -0.36
SMARCE1-202ENST00000348513 EXOC5O00471 708 aa12.77□□□□□ -0.36
SMARCE1-202ENST00000348513 MAP3K2Q9Y2U5 619 aa12.77□□□□□ -0.36
SMARCE1-202ENST00000348513 RPGRQ92834 1020 aaKnown RBP12.77□□□□□ -0.37
SMARCE1-202ENST00000348513 YY1AP1Q9H869 796 aa12.77□□□□□ -0.37
SMARCE1-202ENST00000348513 RANBP6O60518 1105 aaKnown RBP12.77□□□□□ -0.37
SMARCE1-202ENST00000348513 GLRX3O76003 335 aaKnown RBP12.77□□□□□ -0.37
SMARCE1-202ENST00000348513 ANXA1P04083 346 aa12.77□□□□□ -0.37
SMARCE1-202ENST00000348513 ZNF830Q96NB3 372 aaPredicted RBP12.77□□□□□ -0.37
SMARCE1-202ENST00000348513 NAPBQ9H115 298 aa12.77□□□□□ -0.37
SMARCE1-202ENST00000348513 GEMIN8Q9NWZ8 242 aaKnown RBP12.77□□□□□ -0.37
SMARCE1-202ENST00000348513 DACH1Q9UI36 760 aa12.77□□□□□ -0.37
SMARCE1-202ENST00000348513 CFAP45Q9UL16 551 aa12.76□□□□□ -0.37
SMARCE1-202ENST00000348513 RAB11FIP3O75154 756 aa12.76□□□□□ -0.37
SMARCE1-202ENST00000348513 RLBP1P12271 317 aa12.76□□□□□ -0.37
SMARCE1-202ENST00000348513 KIF4AO95239 1232 aa12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms