RNA–Protein interactions for RNA: ENST00000348495.10

SSBP4-202, Transcript of single stranded DNA binding protein 4, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene SSBP4, Length 1,721 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-202ENST00000348495 RPS6KA4O75676 772 aa34.32■■■■□ 3.08
SSBP4-202ENST00000348495 EXOC6Q8TAG9 804 aa34.32■■■■□ 3.08
SSBP4-202ENST00000348495 ATP10DQ9P241 1426 aa34.32■■■■□ 3.08
SSBP4-202ENST00000348495 SF3B2Q13435 895 aaKnown RBP34.31■■■■□ 3.08
SSBP4-202ENST00000348495 SLC4A10Q6U841 1118 aa34.31■■■■□ 3.08
SSBP4-202ENST00000348495 RIC3Q7Z5B4 369 aa34.31■■■■□ 3.08
SSBP4-202ENST00000348495 CCDC125Q86Z20 511 aa34.31■■■■□ 3.08
SSBP4-202ENST00000348495 CCT4P50991 539 aaKnown RBP34.3■■■■□ 3.08
SSBP4-202ENST00000348495 COL15A1P39059 1388 aa34.3■■■■□ 3.08
SSBP4-202ENST00000348495 EN1Q05925 392 aaPredicted RBP34.3■■■■□ 3.08
SSBP4-202ENST00000348495 ITPRIPQ8IWB1 547 aa34.3■■■■□ 3.08
SSBP4-202ENST00000348495 GNPATO15228 680 aa34.29■■■■□ 3.08
SSBP4-202ENST00000348495 BEND3Q5T5X7 828 aa34.28■■■■□ 3.08
SSBP4-202ENST00000348495 ERICH6BQ5W0A0 696 aa34.28■■■■□ 3.08
SSBP4-202ENST00000348495 KIF6Q6ZMV9 814 aa34.28■■■■□ 3.08
SSBP4-202ENST00000348495 METTL22Q9BUU2 404 aaPredicted RBP34.28■■■■□ 3.08
SSBP4-202ENST00000348495 GTF3C3Q9Y5Q9 886 aa34.28■■■■□ 3.08
SSBP4-202ENST00000348495 MAP3K15Q6ZN16 1313 aa34.27■■■■□ 3.08
SSBP4-202ENST00000348495 BAG6P46379 1132 aa34.27■■■■□ 3.08
SSBP4-202ENST00000348495 EZH2Q15910 746 aaKnown RBP34.27■■■■□ 3.08
SSBP4-202ENST00000348495 NPM2Q86SE8 214 aaKnown RBP34.27■■■■□ 3.08
SSBP4-202ENST00000348495 AMIGO3Q86WK7 504 aa34.27■■■■□ 3.08
SSBP4-202ENST00000348495 DZIP3Q86Y13 1208 aaKnown RBP34.27■■■■□ 3.08
SSBP4-202ENST00000348495 AK7Q96M32 723 aa34.27■■■■□ 3.08
SSBP4-202ENST00000348495 DDX19BQ9UMR2 479 aa34.27■■■■□ 3.08
SSBP4-202ENST00000348495 UBR3Q6ZT12 1888 aa34.26■■■■□ 3.08
SSBP4-202ENST00000348495 ZBTB3Q9H5J0 574 aa34.26■■■■□ 3.07
SSBP4-202ENST00000348495 RTCBQ9Y3I0 505 aaKnown RBP34.26■■■■□ 3.07
SSBP4-202ENST00000348495 TBC1D2BQ9UPU7 963 aa34.25■■■■□ 3.07
SSBP4-202ENST00000348495 A0A087WZG4 1122 aa34.24■■■■□ 3.07
SSBP4-202ENST00000348495 ERVV-1B6SEH8 477 aa34.24■■■■□ 3.07
SSBP4-202ENST00000348495 SOCS7O14512 581 aa34.24■■■■□ 3.07
SSBP4-202ENST00000348495 SRCIN1Q9C0H9 1055 aa34.24■■■■□ 3.07
SSBP4-202ENST00000348495 DEFB132Q7Z7B7 95 aa34.23■■■■□ 3.07
SSBP4-202ENST00000348495 LINS1Q8NG48 757 aa34.23■■■■□ 3.07
SSBP4-202ENST00000348495 AKT1S1Q96B36 256 aa34.23■■■■□ 3.07
SSBP4-202ENST00000348495 ZBTB7BO15156 539 aaPredicted RBP34.22■■■■□ 3.07
SSBP4-202ENST00000348495 IBTKQ9P2D0 1353 aaPredicted RBP34.22■■■■□ 3.07
SSBP4-202ENST00000348495 CAMTA2O94983 1202 aa34.21■■■■□ 3.07
SSBP4-202ENST00000348495 IGKV5-2P06315 115 aa34.21■■■■□ 3.07
SSBP4-202ENST00000348495 SMIM5Q71RC9 77 aa34.21■■■■□ 3.07
SSBP4-202ENST00000348495 ALDH1L1O75891 902 aa34.21■■■■□ 3.07
SSBP4-202ENST00000348495 ARXQ96QS3 562 aa34.21■■■■□ 3.07
SSBP4-202ENST00000348495 BCORQ6W2J9 1755 aa34.2■■■■□ 3.07
SSBP4-202ENST00000348495 ADRA2BP18089 450 aa34.2■■■■□ 3.07
SSBP4-202ENST00000348495 NEXNQ0ZGT2 675 aa34.2■■■■□ 3.07
SSBP4-202ENST00000348495 ZNF827Q17R98 1081 aa34.2■■■■□ 3.07
SSBP4-202ENST00000348495 GIGYF2Q6Y7W6 1299 aaKnown RBP34.2■■■■□ 3.07
SSBP4-202ENST00000348495 MYD88Q99836 296 aa34.2■■■■□ 3.07
SSBP4-202ENST00000348495 HLFQ16534 295 aa34.19■■■■□ 3.06
SSBP4-202ENST00000348495 C4AP0C0L4 1744 aa34.18■■■■□ 3.06
SSBP4-202ENST00000348495 CWF19L2Q2TBE0 894 aaKnown RBP34.18■■■■□ 3.06
SSBP4-202ENST00000348495 ARHGEF1Q92888 912 aaKnown RBP34.18■■■■□ 3.06
SSBP4-202ENST00000348495 ZBTB40Q9NUA8 1239 aa34.18■■■■□ 3.06
SSBP4-202ENST00000348495 NUP98P52948 1817 aa34.17■■■■□ 3.06
SSBP4-202ENST00000348495 SCN7AQ01118 1682 aa34.17■■■■□ 3.06
SSBP4-202ENST00000348495 RGL2O15211 777 aa34.17■■■■□ 3.06
SSBP4-202ENST00000348495 SSFA2P28290 1259 aa34.17■■■■□ 3.06
SSBP4-202ENST00000348495 TCIRG1Q13488 830 aa34.17■■■■□ 3.06
SSBP4-202ENST00000348495 AAMPQ13685 434 aa34.17■■■■□ 3.06
SSBP4-202ENST00000348495 NEURL1BA8MQ27 555 aa34.16■■■■□ 3.06
SSBP4-202ENST00000348495 TRAPPC3LQ5T215 181 aa34.16■■■■□ 3.06
SSBP4-202ENST00000348495 UPF1Q92900 1129 aaKnown RBP eCLIP34.16■■■■□ 3.06
SSBP4-202ENST00000348495 ISCA1Q9BUE6 129 aa34.16■■■■□ 3.06
SSBP4-202ENST00000348495 CHMP4BQ9H444 224 aaKnown RBP34.16■■■■□ 3.06
SSBP4-202ENST00000348495 NARFQ9UHQ1 456 aa34.16■■■■□ 3.06
SSBP4-202ENST00000348495 ANKRD36CQ5JPF3 1778 aa34.15■■■■□ 3.06
SSBP4-202ENST00000348495 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP34.15■■■■□ 3.06
SSBP4-202ENST00000348495 USP44Q9H0E7 712 aa34.15■■■■□ 3.06
SSBP4-202ENST00000348495 HSP90AB3PQ58FF7 597 aa34.14■■■■□ 3.06
SSBP4-202ENST00000348495 MEIS3Q99687 375 aa34.14■■■■□ 3.06
SSBP4-202ENST00000348495 ATP5J2-PTCD1G3V325 749 aa34.13■■■■□ 3.05
SSBP4-202ENST00000348495 PHF14O94880 888 aa34.13■■■■□ 3.05
SSBP4-202ENST00000348495 TRIM28Q13263 835 aaKnown RBP34.13■■■■□ 3.05
SSBP4-202ENST00000348495 AFDNP55196 1824 aaKnown RBP34.13■■■■□ 3.05
SSBP4-202ENST00000348495 TUBGCP6Q96RT7 1819 aa34.13■■■■□ 3.05
SSBP4-202ENST00000348495 CLEC4GQ6UXB4 293 aa34.12■■■■□ 3.05
SSBP4-202ENST00000348495 USP42Q9H9J4 1324 aaKnown RBP34.11■■■■□ 3.05
SSBP4-202ENST00000348495 GCKRQ14397 625 aa34.11■■■■□ 3.05
SSBP4-202ENST00000348495 ANO8Q9HCE9 1232 aaPredicted RBP34.11■■■■□ 3.05
SSBP4-202ENST00000348495 BCL2L12Q9HB09 334 aa34.1■■■■□ 3.05
SSBP4-202ENST00000348495 TFCP2L1Q9NZI6 479 aa34.1■■■■□ 3.05
SSBP4-202ENST00000348495 RFC4P35249 363 aa34.1■■■■□ 3.05
SSBP4-202ENST00000348495 ZNF34Q8IZ26 560 aa34.1■■■■□ 3.05
SSBP4-202ENST00000348495 CCDC191Q8NCU4 936 aa34.1■■■■□ 3.05
SSBP4-202ENST00000348495 SRP68Q9UHB9 627 aaKnown RBP34.1■■■■□ 3.05
SSBP4-202ENST00000348495 UTYO14607 1347 aa34.09■■■■□ 3.05
SSBP4-202ENST00000348495 ZNF652Q9Y2D9 606 aa34.09■■■■□ 3.05
SSBP4-202ENST00000348495 ZPR1O75312 459 aa34.08■■■■□ 3.05
SSBP4-202ENST00000348495 USPL1Q5W0Q7 1092 aa34.08■■■■□ 3.05
SSBP4-202ENST00000348495 GNAI3P08754 354 aa34.07■■■■□ 3.05
SSBP4-202ENST00000348495 GRM8O00222 908 aa34.07■■■■□ 3.04
SSBP4-202ENST00000348495 CWC25Q9NXE8 425 aaPredicted RBP34.07■■■■□ 3.04
SSBP4-202ENST00000348495 NBPF7P0C2Y1 421 aaPredicted RBP34.06■■■■□ 3.04
SSBP4-202ENST00000348495 SLC15A2Q16348 729 aa34.06■■■■□ 3.04
SSBP4-202ENST00000348495 PPP4R2Q9NY27 417 aa34.06■■■■□ 3.04
SSBP4-202ENST00000348495 C9orf78Q9NZ63 289 aaPredicted RBP34.05■■■■□ 3.04
SSBP4-202ENST00000348495 QSER1Q2KHR3 1735 aa34.05■■■■□ 3.04
SSBP4-202ENST00000348495 NLRP10Q86W26 655 aa34.04■■■■□ 3.04
SSBP4-202ENST00000348495 FLAD1Q8NFF5 587 aa34.04■■■■□ 3.04
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms