RNA–Protein interactions for RNA: ENST00000348259.9

MRPL55-204, Transcript of mitochondrial ribosomal protein L55, humanhuman

APPRIS P1 TSL 2 BASIC

Gene MRPL55, Length 661 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-204ENST00000348259 DDNO94850 711 aaPredicted RBP12.97□□□□□ -0.33
MRPL55-204ENST00000348259 STARD3NLO95772 234 aa12.97□□□□□ -0.33
MRPL55-204ENST00000348259 ITGBL1O95965 494 aaPredicted RBP12.97□□□□□ -0.33
MRPL55-204ENST00000348259 ZNF790Q6PG37 636 aa12.97□□□□□ -0.33
MRPL55-204ENST00000348259 BICDL1Q6ZP65 573 aa12.97□□□□□ -0.33
MRPL55-204ENST00000348259 TAOK3Q9H2K8 898 aa12.97□□□□□ -0.33
MRPL55-204ENST00000348259 KNSTRNQ9Y448 316 aa12.97□□□□□ -0.33
MRPL55-204ENST00000348259 PRPF40BQ6NWY9 871 aaKnown RBP12.96□□□□□ -0.33
MRPL55-204ENST00000348259 CCDC24Q8N4L8 307 aa12.96□□□□□ -0.33
MRPL55-204ENST00000348259 ZNF622Q969S3 477 aaKnown RBP eCLIP12.96□□□□□ -0.33
MRPL55-204ENST00000348259 PRDM10Q9NQV6 1147 aa12.96□□□□□ -0.33
MRPL55-204ENST00000348259 MKRN1Q9UHC7 482 aaKnown RBP12.96□□□□□ -0.33
MRPL55-204ENST00000348259 NPC1L1Q9UHC9 1359 aa12.95□□□□□ -0.34
MRPL55-204ENST00000348259 CNKSR1Q969H4 720 aa12.95□□□□□ -0.34
MRPL55-204ENST00000348259 TEX13AQ9BXU3 409 aaPredicted RBP12.95□□□□□ -0.34
MRPL55-204ENST00000348259 TAF1DQ9H5J8 278 aaPredicted RBP12.95□□□□□ -0.34
MRPL55-204ENST00000348259 TBC1D2BQ9UPU7 963 aa12.95□□□□□ -0.34
MRPL55-204ENST00000348259 LTBP1Q14766 1721 aa12.95□□□□□ -0.34
MRPL55-204ENST00000348259 COL4A5P29400 1685 aa12.94□□□□□ -0.34
MRPL55-204ENST00000348259 DIAPH1O60610 1272 aaKnown RBP12.94□□□□□ -0.34
MRPL55-204ENST00000348259 A1BGP04217 495 aa12.94□□□□□ -0.34
MRPL55-204ENST00000348259 LDHDQ86WU2 507 aa12.94□□□□□ -0.34
MRPL55-204ENST00000348259 TTC5Q8N0Z6 440 aa12.93□□□□□ -0.34
MRPL55-204ENST00000348259 CNBD1Q8NA66 436 aa12.93□□□□□ -0.34
MRPL55-204ENST00000348259 MASTLQ96GX5 879 aa12.93□□□□□ -0.34
MRPL55-204ENST00000348259 ZNF219Q9P2Y4 722 aaPredicted RBP12.93□□□□□ -0.34
MRPL55-204ENST00000348259 LAMB4A4D0S4 1761 aa12.93□□□□□ -0.34
MRPL55-204ENST00000348259 ZNF541Q9H0D2 1346 aa12.92□□□□□ -0.34
MRPL55-204ENST00000348259 RGL2O15211 777 aa12.92□□□□□ -0.34
MRPL55-204ENST00000348259 KCNQ3O43525 872 aa12.92□□□□□ -0.34
MRPL55-204ENST00000348259 VEGFBP49765 207 aa12.92□□□□□ -0.34
MRPL55-204ENST00000348259 SOGA3Q5TF21 947 aa12.92□□□□□ -0.34
MRPL55-204ENST00000348259 SETDB2Q96T68 719 aa12.92□□□□□ -0.34
MRPL55-204ENST00000348259 WBP1LQ9NX94 342 aa12.92□□□□□ -0.34
MRPL55-204ENST00000348259 IQCA1LA6NCM1 817 aa12.91□□□□□ -0.34
MRPL55-204ENST00000348259 RASSF10A6NK89 507 aa12.91□□□□□ -0.34
MRPL55-204ENST00000348259 GNAT3A8MTJ3 354 aa12.91□□□□□ -0.34
MRPL55-204ENST00000348259 CLEC4GQ6UXB4 293 aa12.91□□□□□ -0.34
MRPL55-204ENST00000348259 GAS2L2Q8NHY3 880 aa12.91□□□□□ -0.34
MRPL55-204ENST00000348259 FMNL2Q96PY5 1086 aa12.91□□□□□ -0.34
MRPL55-204ENST00000348259 TRPM7Q96QT4 1865 aa12.91□□□□□ -0.34
MRPL55-204ENST00000348259 MYBBP1AQ9BQG0 1328 aaKnown RBP12.9□□□□□ -0.34
MRPL55-204ENST00000348259 NUP98P52948 1817 aa12.9□□□□□ -0.34
MRPL55-204ENST00000348259 FZD9O00144 591 aa12.9□□□□□ -0.34
MRPL55-204ENST00000348259 TNRC18O15417 2968 aaPredicted RBP12.9□□□□□ -0.34
MRPL55-204ENST00000348259 FKBP4Q02790 459 aaKnown RBP eCLIP12.9□□□□□ -0.34
MRPL55-204ENST00000348259 TEFQ10587 303 aa12.9□□□□□ -0.34
MRPL55-204ENST00000348259 YTHDC1Q96MU7 727 aaKnown RBP12.9□□□□□ -0.34
MRPL55-204ENST00000348259 USP16Q9Y5T5 823 aa12.9□□□□□ -0.34
MRPL55-204ENST00000348259 PRAMEF22A3QJZ6 481 aa12.89□□□□□ -0.35
MRPL55-204ENST00000348259 TMEM88BA6NKF7 163 aa12.89□□□□□ -0.35
MRPL55-204ENST00000348259 NPR1P16066 1061 aa12.89□□□□□ -0.35
MRPL55-204ENST00000348259 CTCFP49711 727 aaPredicted RBP12.89□□□□□ -0.35
MRPL55-204ENST00000348259 ST5P78524 1137 aa12.89□□□□□ -0.35
MRPL55-204ENST00000348259 CCDC93Q567U6 631 aa12.89□□□□□ -0.35
MRPL55-204ENST00000348259 OLFM4Q6UX06 510 aa12.89□□□□□ -0.35
MRPL55-204ENST00000348259 DZIP3Q86Y13 1208 aaKnown RBP12.89□□□□□ -0.35
MRPL55-204ENST00000348259 NBPF26B4DH59 902 aa12.88□□□□□ -0.35
MRPL55-204ENST00000348259 SLC34A2O95436 690 aa12.88□□□□□ -0.35
MRPL55-204ENST00000348259 NBPF10Q6P3W6 841 aaKnown RBP12.88□□□□□ -0.35
MRPL55-204ENST00000348259 NBPF15Q8N660 670 aa12.88□□□□□ -0.35
MRPL55-204ENST00000348259 PHACTR3Q96KR7 559 aa12.88□□□□□ -0.35
MRPL55-204ENST00000348259 KDM3BQ7LBC6 1761 aa12.88□□□□□ -0.35
MRPL55-204ENST00000348259 RIC1Q4ADV7 1423 aa12.88□□□□□ -0.35
MRPL55-204ENST00000348259 HSPA8P11142 646 aaKnown RBP12.87□□□□□ -0.35
MRPL55-204ENST00000348259 CRY2Q49AN0 593 aa12.87□□□□□ -0.35
MRPL55-204ENST00000348259 RSPH6AQ9H0K4 717 aa12.87□□□□□ -0.35
MRPL55-204ENST00000348259 MRS2Q9HD23 443 aa12.87□□□□□ -0.35
MRPL55-204ENST00000348259 ZNF277Q9NRM2 450 aaPredicted RBP12.87□□□□□ -0.35
MRPL55-204ENST00000348259 HACL1Q9UJ83 578 aa12.87□□□□□ -0.35
MRPL55-204ENST00000348259 DLG5Q8TDM6 1919 aa12.86□□□□□ -0.35
MRPL55-204ENST00000348259 EPHX2P34913 555 aa12.86□□□□□ -0.35
MRPL55-204ENST00000348259 PIP4K2AP48426 406 aaPredicted RBP12.86□□□□□ -0.35
MRPL55-204ENST00000348259 ZNF330Q9Y3S2 320 aaPredicted RBP12.86□□□□□ -0.35
MRPL55-204ENST00000348259 RNF123Q5XPI4 1314 aa12.86□□□□□ -0.35
MRPL55-204ENST00000348259 ABCC12Q96J65 1359 aa12.85□□□□□ -0.35
MRPL55-204ENST00000348259 BTBD11A6QL63 1104 aa12.85□□□□□ -0.35
MRPL55-204ENST00000348259 IARSP41252 1262 aaKnown RBP12.85□□□□□ -0.35
MRPL55-204ENST00000348259 LBX1P52954 281 aa12.85□□□□□ -0.35
MRPL55-204ENST00000348259 CCDC184Q52MB2 194 aa12.85□□□□□ -0.35
MRPL55-204ENST00000348259 CC2D1BQ5T0F9 858 aaKnown RBP12.85□□□□□ -0.35
MRPL55-204ENST00000348259 NBPF5PQ86XG9 351 aaPredicted RBP12.85□□□□□ -0.35
MRPL55-204ENST00000348259 PSMD1Q99460 953 aa12.85□□□□□ -0.35
MRPL55-204ENST00000348259 HLFQ16534 295 aa12.84□□□□□ -0.35
MRPL55-204ENST00000348259 MAP1SQ66K74 1059 aaPredicted RBP12.84□□□□□ -0.35
MRPL55-204ENST00000348259 PNMA8AQ86V59 439 aaPredicted RBP12.84□□□□□ -0.35
MRPL55-204ENST00000348259 RTKN2Q8IZC4 609 aa12.84□□□□□ -0.35
MRPL55-204ENST00000348259 CNTROBQ8N137 903 aa12.84□□□□□ -0.35
MRPL55-204ENST00000348259 GPC2Q8N158 579 aa12.84□□□□□ -0.35
MRPL55-204ENST00000348259 IBTKQ9P2D0 1353 aaPredicted RBP12.83□□□□□ -0.36
MRPL55-204ENST00000348259 SNRPA1P09661 255 aaKnown RBP12.83□□□□□ -0.36
MRPL55-204ENST00000348259 DEFB115Q30KQ5 88 aa12.83□□□□□ -0.36
MRPL55-204ENST00000348259 SYNE4Q8N205 404 aa12.83□□□□□ -0.36
MRPL55-204ENST00000348259 PNISRQ8TF01 805 aaKnown RBP12.83□□□□□ -0.36
MRPL55-204ENST00000348259 ABHD8Q96I13 439 aa12.83□□□□□ -0.36
MRPL55-204ENST00000348259 ZNF652Q9Y2D9 606 aa12.83□□□□□ -0.36
MRPL55-204ENST00000348259 WDR33Q9C0J8 1336 aaKnown RBP12.83□□□□□ -0.36
MRPL55-204ENST00000348259 U2SURPO15042 1029 aaKnown RBP12.82□□□□□ -0.36
MRPL55-204ENST00000348259 HOXA10P31260 410 aaPredicted RBP12.82□□□□□ -0.36
MRPL55-204ENST00000348259 PRKAR2BP31323 418 aa12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms