RNA–Protein interactions for RNA: ENST00000345016.9

AP3D1-201, Transcript of adaptor related protein complex 3 subunit delta 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene AP3D1, Length 4,870 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP3D1-201ENST00000345016 BCCIPQ9P287 314 aaKnown RBP eCLIP19.3■□□□□ 0.684e-6■■■■□ 19.6
AP3D1-201ENST00000345016 HLTFQ14527 1009 aaKnown RBP eCLIP19.3■□□□□ 0.68
AP3D1-201ENST00000345016 PROSER2Q86WR7 435 aaPredicted RBP19.3■□□□□ 0.68
AP3D1-201ENST00000345016 GPATCH11Q8N954 259 aa19.3■□□□□ 0.68
AP3D1-201ENST00000345016 ARFGAP3Q9NP61 516 aa19.3■□□□□ 0.68
AP3D1-201ENST00000345016 RPRD2Q5VT52 1461 aaKnown RBP19.3■□□□□ 0.68
AP3D1-201ENST00000345016 NEK1Q96PY6 1258 aa19.29■□□□□ 0.68
AP3D1-201ENST00000345016 AKAP2Q9Y2D5 859 aa19.29■□□□□ 0.68
AP3D1-201ENST00000345016 USP5P45974 858 aa19.29■□□□□ 0.68
AP3D1-201ENST00000345016 HS1BP3Q53T59 392 aa19.29■□□□□ 0.68
AP3D1-201ENST00000345016 SUPT6HQ7KZ85 1726 aaKnown RBP19.29■□□□□ 0.68
AP3D1-201ENST00000345016 SMC5Q8IY18 1101 aa19.29■□□□□ 0.68
AP3D1-201ENST00000345016 RNF216Q9NWF9 866 aaPredicted RBP19.29■□□□□ 0.68
AP3D1-201ENST00000345016 SLC12A7Q9Y666 1083 aa19.29■□□□□ 0.68
AP3D1-201ENST00000345016 GOLGA6L10A0A0M3HER8 536 aa19.29■□□□□ 0.68
AP3D1-201ENST00000345016 FAM83GA6ND36 823 aa19.28■□□□□ 0.68
AP3D1-201ENST00000345016 CCDC102BQ68D86 513 aa19.28■□□□□ 0.68
AP3D1-201ENST00000345016 MEIS3Q99687 375 aa19.28■□□□□ 0.68
AP3D1-201ENST00000345016 DISP3Q9P2K9 1392 aa19.28■□□□□ 0.68
AP3D1-201ENST00000345016 MICALCLQ6ZW33 695 aa19.28■□□□□ 0.68
AP3D1-201ENST00000345016 RRAGDQ9NQL2 400 aaPredicted RBP19.28■□□□□ 0.68
AP3D1-201ENST00000345016 LIG1P18858 919 aa19.28■□□□□ 0.68
AP3D1-201ENST00000345016 PDE1AP54750 535 aa19.28■□□□□ 0.68
AP3D1-201ENST00000345016 MCM6Q14566 821 aa19.28■□□□□ 0.68
AP3D1-201ENST00000345016 TNNQ9UQP3 1299 aa19.28■□□□□ 0.68
AP3D1-201ENST00000345016 ADGRF5Q8IZF2 1346 aa19.28■□□□□ 0.68
AP3D1-201ENST00000345016 GOLGA8AA7E2F4 631 aa19.28■□□□□ 0.68
AP3D1-201ENST00000345016 IFIT3O14879 490 aaKnown RBP19.27■□□□□ 0.68
AP3D1-201ENST00000345016 DNM1Q05193 864 aaKnown RBP19.27■□□□□ 0.68
AP3D1-201ENST00000345016 CCDC178Q5BJE1 867 aa19.27■□□□□ 0.68
AP3D1-201ENST00000345016 BRF1Q92994 677 aa19.27■□□□□ 0.68
AP3D1-201ENST00000345016 DNAJC25Q9H1X3 360 aa19.27■□□□□ 0.68
AP3D1-201ENST00000345016 SSR1P43307 286 aaKnown RBP19.27■□□□□ 0.68
AP3D1-201ENST00000345016 CDK13Q14004 1512 aaKnown RBP19.27■□□□□ 0.68
AP3D1-201ENST00000345016 PTCD1O75127 700 aaKnown RBP19.27■□□□□ 0.67
AP3D1-201ENST00000345016 UBASH3AP57075 661 aa19.27■□□□□ 0.67
AP3D1-201ENST00000345016 ZSCAN16Q9H4T2 348 aaPredicted RBP19.27■□□□□ 0.67
AP3D1-201ENST00000345016 ABCC5O15440 1437 aa19.27■□□□□ 0.67
AP3D1-201ENST00000345016 RAB11FIP4Q86YS3 637 aa19.26■□□□□ 0.67
AP3D1-201ENST00000345016 CTCFLQ8NI51 663 aaPredicted RBP19.26■□□□□ 0.67
AP3D1-201ENST00000345016 PHAXQ9H814 394 aaKnown RBP19.26■□□□□ 0.67
AP3D1-201ENST00000345016 ARHGAP45Q92619 1136 aa19.26■□□□□ 0.67
AP3D1-201ENST00000345016 ESYT1Q9BSJ8 1104 aa19.26■□□□□ 0.67
AP3D1-201ENST00000345016 DBF4Q9UBU7 674 aaPredicted RBP19.26■□□□□ 0.67
AP3D1-201ENST00000345016 IL16Q14005 1332 aa19.26■□□□□ 0.67
AP3D1-201ENST00000345016 GBP2P32456 591 aaPredicted RBP19.26■□□□□ 0.67
AP3D1-201ENST00000345016 IARSP41252 1262 aaKnown RBP19.26■□□□□ 0.67
AP3D1-201ENST00000345016 MNAT1P51948 309 aa19.26■□□□□ 0.67
AP3D1-201ENST00000345016 ZC3H6P61129 1189 aaKnown RBP19.26■□□□□ 0.67
AP3D1-201ENST00000345016 EPRSP07814 1512 aaKnown RBP19.26■□□□□ 0.67
AP3D1-201ENST00000345016 MATR3P43243 847 aaKnown RBP eCLIP19.25■□□□□ 0.67
AP3D1-201ENST00000345016 HAND2P61296 217 aa19.25■□□□□ 0.67
AP3D1-201ENST00000345016 HSP90AA4PQ58FG1 418 aa19.25■□□□□ 0.67
AP3D1-201ENST00000345016 C16orf71Q8IYS4 520 aaPredicted RBP19.25■□□□□ 0.67
AP3D1-201ENST00000345016 ZGPATQ8N5A5 531 aaKnown RBP19.25■□□□□ 0.67
AP3D1-201ENST00000345016 USHBP1Q8N6Y0 703 aa19.25■□□□□ 0.67
AP3D1-201ENST00000345016 SLU7O95391 586 aaKnown RBP19.25■□□□□ 0.67
AP3D1-201ENST00000345016 RLBP1P12271 317 aa19.25■□□□□ 0.67
AP3D1-201ENST00000345016 TICAM2Q86XR7 235 aa19.25■□□□□ 0.67
AP3D1-201ENST00000345016 GOLIM4O00461 696 aa19.25■□□□□ 0.67
AP3D1-201ENST00000345016 RAPGEF3O95398 923 aa19.25■□□□□ 0.67
AP3D1-201ENST00000345016 MTIF2P46199 727 aaKnown RBP19.25■□□□□ 0.67
AP3D1-201ENST00000345016 VPS36Q86VN1 386 aa19.25■□□□□ 0.67
AP3D1-201ENST00000345016 RHPN1Q8TCX5 695 aa19.25■□□□□ 0.67
AP3D1-201ENST00000345016 CCDC94Q9BW85 323 aaPredicted RBP19.25■□□□□ 0.67
AP3D1-201ENST00000345016 ANAPC15P60006 121 aa19.25■□□□□ 0.67
AP3D1-201ENST00000345016 SSRP1Q08945 709 aaKnown RBP19.25■□□□□ 0.67
AP3D1-201ENST00000345016 CCDC175P0C221 793 aa19.24■□□□□ 0.67
AP3D1-201ENST00000345016 MICU3Q86XE3 530 aa19.24■□□□□ 0.67
AP3D1-201ENST00000345016 GOPCQ9HD26 462 aa19.24■□□□□ 0.67
AP3D1-201ENST00000345016 JADE2Q9NQC1 790 aa19.24■□□□□ 0.67
AP3D1-201ENST00000345016 N4BP3O15049 544 aa19.24■□□□□ 0.67
AP3D1-201ENST00000345016 PPP1R12BO60237 982 aaPredicted RBP19.24■□□□□ 0.67
AP3D1-201ENST00000345016 RANBP6O60518 1105 aaKnown RBP19.24■□□□□ 0.67
AP3D1-201ENST00000345016 GSTTP1A0A1W2PQM5 241 aa19.24■□□□□ 0.67
AP3D1-201ENST00000345016 F13A1P00488 732 aa19.24■□□□□ 0.67
AP3D1-201ENST00000345016 A0A087WZG4 1122 aa19.23■□□□□ 0.67
AP3D1-201ENST00000345016 PI4KAP2A4QPH2 592 aa19.23■□□□□ 0.67
AP3D1-201ENST00000345016 CCDC144CPQ8IYA2 1237 aa19.23■□□□□ 0.67
AP3D1-201ENST00000345016 ANKRD44Q8N8A2 993 aa19.23■□□□□ 0.67
AP3D1-201ENST00000345016 PI4KAP1Q8N8J0 262 aa19.23■□□□□ 0.67
AP3D1-201ENST00000345016 NAA15Q9BXJ9 866 aaKnown RBP19.23■□□□□ 0.67
AP3D1-201ENST00000345016 HMG20BQ9P0W2 317 aa19.23■□□□□ 0.67
AP3D1-201ENST00000345016 IGHMBP2P38935 993 aaKnown RBP19.23■□□□□ 0.67
AP3D1-201ENST00000345016 SYKP43405 635 aa19.23■□□□□ 0.67
AP3D1-201ENST00000345016 SNRKQ9NRH2 765 aa19.23■□□□□ 0.67
AP3D1-201ENST00000345016 ZNF76P36508 570 aa19.23■□□□□ 0.67
AP3D1-201ENST00000345016 MPRIPQ6WCQ1 1025 aa19.23■□□□□ 0.67
AP3D1-201ENST00000345016 HECW1Q76N89 1606 aa19.23■□□□□ 0.67
AP3D1-201ENST00000345016 IQCA1Q86XH1 822 aa19.23■□□□□ 0.67
AP3D1-201ENST00000345016 LRRC2Q9BYS8 371 aa19.23■□□□□ 0.67
AP3D1-201ENST00000345016 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP19.23■□□□□ 0.67
AP3D1-201ENST00000345016 PTGS1P23219 599 aa19.22■□□□□ 0.67
AP3D1-201ENST00000345016 AOPEPQ8N6M6 819 aa19.22■□□□□ 0.67
AP3D1-201ENST00000345016 PAF1Q8N7H5 531 aa19.22■□□□□ 0.67
AP3D1-201ENST00000345016 TSG101Q99816 390 aa19.22■□□□□ 0.67
AP3D1-201ENST00000345016 TYRO3Q06418 890 aa19.22■□□□□ 0.67
AP3D1-201ENST00000345016 PRDM11Q9NQV5 511 aa19.22■□□□□ 0.67
AP3D1-201ENST00000345016 RSPH14Q9UHP6 348 aa19.22■□□□□ 0.67
AP3D1-201ENST00000345016 MAP3K12Q12852 859 aa19.22■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms