RNA–Protein interactions for RNA: ENST00000344780.4

SNX21-202, Transcript of sorting nexin family member 21, humanhuman

TSL 2

Gene SNX21, Length 3,106 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX21-202ENST00000344780 KIF1BPQ96EK5 621 aa16.03■□□□□ 0.16
SNX21-202ENST00000344780 PPP4R3BQ5MIZ7 849 aa16.03■□□□□ 0.16
SNX21-202ENST00000344780 SALL3Q9BXA9 1300 aa16.03■□□□□ 0.16
SNX21-202ENST00000344780 OFD1O75665 1012 aa16.03■□□□□ 0.16
SNX21-202ENST00000344780 SSH3Q8TE77 659 aa16.03■□□□□ 0.16
SNX21-202ENST00000344780 CCDC8Q9H0W5 538 aaPredicted RBP16.03■□□□□ 0.16
SNX21-202ENST00000344780 CNPY2Q9Y2B0 182 aa16.03■□□□□ 0.16
SNX21-202ENST00000344780 PDZRN4Q6ZMN7 1036 aaPredicted RBP16.02■□□□□ 0.16
SNX21-202ENST00000344780 HTATSF1O43719 755 aaKnown RBP16.02■□□□□ 0.15
SNX21-202ENST00000344780 AK2P54819 239 aa16.02■□□□□ 0.15
SNX21-202ENST00000344780 TSPY26PQ9H489 355 aa16.02■□□□□ 0.15
SNX21-202ENST00000344780 SMC3Q9UQE7 1217 aa16.02■□□□□ 0.15
SNX21-202ENST00000344780 VPS37CA5D8V6 355 aaPredicted RBP16.01■□□□□ 0.15
SNX21-202ENST00000344780 IFIT2P09913 472 aaKnown RBP16.01■□□□□ 0.15
SNX21-202ENST00000344780 PRPF40BQ6NWY9 871 aaKnown RBP16.01■□□□□ 0.15
SNX21-202ENST00000344780 CCDC83Q8IWF9 413 aa16.01■□□□□ 0.15
SNX21-202ENST00000344780 CLASRPQ8N2M8 674 aaKnown RBP16.01■□□□□ 0.15
SNX21-202ENST00000344780 STAP2Q9UGK3 403 aa16.01■□□□□ 0.15
SNX21-202ENST00000344780 TCEANC2Q96MN5 208 aa16.01■□□□□ 0.15
SNX21-202ENST00000344780 ZNF830Q96NB3 372 aaPredicted RBP16.01■□□□□ 0.15
SNX21-202ENST00000344780 SNX14Q9Y5W7 946 aa16.01■□□□□ 0.15
SNX21-202ENST00000344780 ANAPC15P60006 121 aa16.01■□□□□ 0.15
SNX21-202ENST00000344780 CUL4AQ13619 759 aa16.01■□□□□ 0.15
SNX21-202ENST00000344780 BEND3Q5T5X7 828 aa16.01■□□□□ 0.15
SNX21-202ENST00000344780 KRT28Q7Z3Y7 464 aa16.01■□□□□ 0.15
SNX21-202ENST00000344780 SYAP1Q96A49 352 aaPredicted RBP16.01■□□□□ 0.15
SNX21-202ENST00000344780 ZBTB9Q96C00 473 aa16.01■□□□□ 0.15
SNX21-202ENST00000344780 JAKMIP1Q96N16 626 aaKnown RBP16.01■□□□□ 0.15
SNX21-202ENST00000344780 NDUFB9Q9Y6M9 179 aa16.01■□□□□ 0.15
SNX21-202ENST00000344780 WDR33Q9C0J8 1336 aaKnown RBP16■□□□□ 0.15
SNX21-202ENST00000344780 RNMTO43148 476 aaKnown RBP16■□□□□ 0.15
SNX21-202ENST00000344780 TRERF1Q96PN7 1200 aa16■□□□□ 0.15
SNX21-202ENST00000344780 HSPA4P34932 840 aa16■□□□□ 0.15
SNX21-202ENST00000344780 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP16■□□□□ 0.15
SNX21-202ENST00000344780 SGSM2O43147 1006 aa15.99■□□□□ 0.15
SNX21-202ENST00000344780 RAB11FIP3O75154 756 aa15.99■□□□□ 0.15
SNX21-202ENST00000344780 PI4K2BQ8TCG2 481 aa15.99■□□□□ 0.15
SNX21-202ENST00000344780 RIC3Q7Z5B4 369 aa15.99■□□□□ 0.15
SNX21-202ENST00000344780 AACSQ86V21 672 aa15.99■□□□□ 0.15
SNX21-202ENST00000344780 C17orf53Q8N3J3 647 aaPredicted RBP15.99■□□□□ 0.15
SNX21-202ENST00000344780 PIK3C2AO00443 1686 aa15.99■□□□□ 0.15
SNX21-202ENST00000344780 NRKQ7Z2Y5 1582 aa15.99■□□□□ 0.15
SNX21-202ENST00000344780 CDK11BP21127 795 aaKnown RBP15.99■□□□□ 0.15
SNX21-202ENST00000344780 NECAB1Q8N987 351 aa15.99■□□□□ 0.15
SNX21-202ENST00000344780 NFATC2IPQ8NCF5 419 aa15.99■□□□□ 0.15
SNX21-202ENST00000344780 PTH1RQ03431 593 aa15.98■□□□□ 0.15
SNX21-202ENST00000344780 AKAP4Q5JQC9 854 aa15.98■□□□□ 0.15
SNX21-202ENST00000344780 FERMT3Q86UX7 667 aa15.98■□□□□ 0.15
SNX21-202ENST00000344780 INTS4Q96HW7 963 aaKnown RBP15.98■□□□□ 0.15
SNX21-202ENST00000344780 TCHHQ07283 1943 aa15.98■□□□□ 0.15
SNX21-202ENST00000344780 USP25Q9UHP3 1055 aa15.98■□□□□ 0.15
SNX21-202ENST00000344780 LARGE1O95461 756 aa15.97■□□□□ 0.15
SNX21-202ENST00000344780 SMAP1Q8IYB5 467 aaPredicted RBP15.97■□□□□ 0.15
SNX21-202ENST00000344780 ZNF330Q9Y3S2 320 aaPredicted RBP15.97■□□□□ 0.15
SNX21-202ENST00000344780 SYT1P21579 422 aa15.97■□□□□ 0.15
SNX21-202ENST00000344780 ADCK5Q3MIX3 580 aa15.97■□□□□ 0.15
SNX21-202ENST00000344780 KCNH5Q8NCM2 988 aa15.97■□□□□ 0.15
SNX21-202ENST00000344780 EDC3Q96F86 508 aaKnown RBP15.97■□□□□ 0.15
SNX21-202ENST00000344780 BOLA2Q9H3K6 86 aa15.97■□□□□ 0.15
SNX21-202ENST00000344780 LIMCH1Q9UPQ0 1083 aa15.97■□□□□ 0.15
SNX21-202ENST00000344780 ATP5J2-PTCD1G3V325 749 aa15.97■□□□□ 0.15
SNX21-202ENST00000344780 STX6O43752 255 aa15.97■□□□□ 0.15
SNX21-202ENST00000344780 PTCD1O75127 700 aaKnown RBP15.97■□□□□ 0.15
SNX21-202ENST00000344780 HCLS1P14317 486 aaPredicted RBP15.97■□□□□ 0.15
SNX21-202ENST00000344780 RUFY3Q7L099 469 aa15.97■□□□□ 0.15
SNX21-202ENST00000344780 DBF4Q9UBU7 674 aaPredicted RBP15.97■□□□□ 0.15
SNX21-202ENST00000344780 RAD50Q92878 1312 aa15.96■□□□□ 0.15
SNX21-202ENST00000344780 GIGYF1O75420 1035 aaPredicted RBP15.96■□□□□ 0.14
SNX21-202ENST00000344780 NOL7Q9UMY1 257 aaKnown RBP15.96■□□□□ 0.14
SNX21-202ENST00000344780 GLRX3O76003 335 aaKnown RBP15.95■□□□□ 0.14
SNX21-202ENST00000344780 ZSCAN20P17040 1043 aaPredicted RBP15.95■□□□□ 0.14
SNX21-202ENST00000344780 RAPGEF4Q8WZA2 1011 aa15.95■□□□□ 0.14
SNX21-202ENST00000344780 SUCLG2Q96I99 432 aa15.95■□□□□ 0.14
SNX21-202ENST00000344780 LSG1Q9H089 658 aaKnown RBP15.95■□□□□ 0.14
SNX21-202ENST00000344780 PDRG1Q9NUG6 133 aa15.95■□□□□ 0.14
SNX21-202ENST00000344780 GJB2P29033 226 aa15.95■□□□□ 0.14
SNX21-202ENST00000344780 STK3Q13188 491 aa15.95■□□□□ 0.14
SNX21-202ENST00000344780 HSP90AB4PQ58FF6 505 aa15.95■□□□□ 0.14
SNX21-202ENST00000344780 ARHGEF25Q86VW2 580 aa15.95■□□□□ 0.14
SNX21-202ENST00000344780 TLR7Q9NYK1 1049 aaKnown RBP15.95■□□□□ 0.14
SNX21-202ENST00000344780 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP15.94■□□□□ 0.14
SNX21-202ENST00000344780 ZSCAN22P10073 491 aaPredicted RBP15.94■□□□□ 0.14
SNX21-202ENST00000344780 DNM1Q05193 864 aaKnown RBP15.94■□□□□ 0.14
SNX21-202ENST00000344780 FAM173BQ6P4H8 233 aa15.94■□□□□ 0.14
SNX21-202ENST00000344780 GIMAP6Q6P9H5 292 aa15.94■□□□□ 0.14
SNX21-202ENST00000344780 FAM227BQ96M60 508 aa15.94■□□□□ 0.14
SNX21-202ENST00000344780 MYD88Q99836 296 aa15.94■□□□□ 0.14
SNX21-202ENST00000344780 BICC1Q9H694 974 aaKnown RBP15.94■□□□□ 0.14
SNX21-202ENST00000344780 ZKSCAN5Q9Y2L8 839 aa15.94■□□□□ 0.14
SNX21-202ENST00000344780 ZSCAN21Q9Y5A6 473 aaPredicted RBP15.94■□□□□ 0.14
SNX21-202ENST00000344780 CHGBP05060 677 aa15.94■□□□□ 0.14
SNX21-202ENST00000344780 G3BP1Q13283 466 aaKnown RBP eCLIP15.94■□□□□ 0.14
SNX21-202ENST00000344780 RUFY2Q8WXA3 655 aa15.94■□□□□ 0.14
SNX21-202ENST00000344780 CCDC39Q9UFE4 941 aa15.94■□□□□ 0.14
SNX21-202ENST00000344780 ADCY9O60503 1353 aa15.94■□□□□ 0.14
SNX21-202ENST00000344780 PHF14O94880 888 aa15.94■□□□□ 0.14
SNX21-202ENST00000344780 POLA2Q14181 598 aa15.94■□□□□ 0.14
SNX21-202ENST00000344780 GPATCH3Q96I76 525 aa15.94■□□□□ 0.14
SNX21-202ENST00000344780 ECHDC1Q9NTX5 307 aa15.94■□□□□ 0.14
SNX21-202ENST00000344780 DMTNQ08495 405 aa15.93■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms