RNA–Protein interactions for RNA: ENST00000344622.8

GDNF-202, Transcript of glial cell derived neurotrophic factor, humanhuman

TSL 1 (best) BASIC

Gene GDNF, Length 3,655 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GDNF-202ENST00000344622 SCN7AQ01118 1682 aa9.35□□□□□ -0.91
GDNF-202ENST00000344622 ATP5J2-PTCD1G3V325 749 aa9.35□□□□□ -0.91
GDNF-202ENST00000344622 TBC1D2BQ9UPU7 963 aa9.35□□□□□ -0.91
GDNF-202ENST00000344622 MAP3K2Q9Y2U5 619 aa9.35□□□□□ -0.91
GDNF-202ENST00000344622 UBN2Q6ZU65 1347 aa9.35□□□□□ -0.91
GDNF-202ENST00000344622 CT47B1P0C2W7 299 aaPredicted RBP9.35□□□□□ -0.91
GDNF-202ENST00000344622 ZKSCAN2Q63HK3 967 aa9.35□□□□□ -0.91
GDNF-202ENST00000344622 USP44Q9H0E7 712 aa9.35□□□□□ -0.91
GDNF-202ENST00000344622 ZBTB3Q9H5J0 574 aa9.35□□□□□ -0.91
GDNF-202ENST00000344622 ZBTB40Q9NUA8 1239 aa9.35□□□□□ -0.91
GDNF-202ENST00000344622 LAMB2P55268 1798 aa9.35□□□□□ -0.91
GDNF-202ENST00000344622 EN1Q05925 392 aaPredicted RBP9.35□□□□□ -0.91
GDNF-202ENST00000344622 FKBP5Q13451 457 aaPredicted RBP9.35□□□□□ -0.91
GDNF-202ENST00000344622 MVPQ14764 893 aaKnown RBP9.35□□□□□ -0.91
GDNF-202ENST00000344622 EZH2Q15910 746 aaKnown RBP9.35□□□□□ -0.91
GDNF-202ENST00000344622 EPHA10Q5JZY3 1008 aa9.35□□□□□ -0.91
GDNF-202ENST00000344622 SLC4A10Q6U841 1118 aa9.35□□□□□ -0.91
GDNF-202ENST00000344622 DZIP1LQ8IYY4 767 aaKnown RBP9.35□□□□□ -0.91
GDNF-202ENST00000344622 CCDC30Q5VVM6 783 aa9.34□□□□□ -0.91
GDNF-202ENST00000344622 DBF4Q9UBU7 674 aaPredicted RBP9.34□□□□□ -0.91
GDNF-202ENST00000344622 SRP68Q9UHB9 627 aaKnown RBP9.34□□□□□ -0.91
GDNF-202ENST00000344622 HOXB7P09629 217 aa9.34□□□□□ -0.91
GDNF-202ENST00000344622 RTL5Q5HYW3 569 aaPredicted RBP9.34□□□□□ -0.91
GDNF-202ENST00000344622 ZNF330Q9Y3S2 320 aaPredicted RBP9.34□□□□□ -0.91
GDNF-202ENST00000344622 EIF5P55010 431 aaKnown RBP9.34□□□□□ -0.91
GDNF-202ENST00000344622 TNRC6CQ9HCJ0 1690 aaKnown RBP9.34□□□□□ -0.91
GDNF-202ENST00000344622 RGPD3A6NKT7 1758 aaPredicted RBP9.33□□□□□ -0.92
GDNF-202ENST00000344622 RGPD4Q7Z3J3 1758 aa9.33□□□□□ -0.92
GDNF-202ENST00000344622 INTS3Q68E01 1043 aaKnown RBP9.33□□□□□ -0.92
GDNF-202ENST00000344622 ITPRIPQ8IWB1 547 aa9.33□□□□□ -0.92
GDNF-202ENST00000344622 VSIG10Q8N0Z9 540 aa9.33□□□□□ -0.92
GDNF-202ENST00000344622 KDM2BQ8NHM5 1336 aa9.33□□□□□ -0.92
GDNF-202ENST00000344622 SPEF2Q9C093 1822 aa9.33□□□□□ -0.92
GDNF-202ENST00000344622 FAM196AQ6ZSG2 479 aa9.33□□□□□ -0.92
GDNF-202ENST00000344622 PDE3AQ14432 1141 aa9.32□□□□□ -0.92
GDNF-202ENST00000344622 CAMKK2Q96RR4 588 aa9.32□□□□□ -0.92
GDNF-202ENST00000344622 PNMA6EA0A0J9YXQ4 647 aa9.32□□□□□ -0.92
GDNF-202ENST00000344622 CASP7P55210 303 aa9.32□□□□□ -0.92
GDNF-202ENST00000344622 TXNRD1Q16881 649 aa9.32□□□□□ -0.92
GDNF-202ENST00000344622 ERICH6Q7L0X2 663 aa9.32□□□□□ -0.92
GDNF-202ENST00000344622 CCNL1Q9UK58 526 aaPredicted RBP9.32□□□□□ -0.92
GDNF-202ENST00000344622 MYH3P11055 1940 aa9.32□□□□□ -0.92
GDNF-202ENST00000344622 CCDC24Q8N4L8 307 aa9.32□□□□□ -0.92
GDNF-202ENST00000344622 ARHGAP45Q92619 1136 aa9.32□□□□□ -0.92
GDNF-202ENST00000344622 COL24A1Q17RW2 1714 aa9.31□□□□□ -0.92
GDNF-202ENST00000344622 APBA3O96018 575 aa9.31□□□□□ -0.92
GDNF-202ENST00000344622 C3orf67Q6ZVT6 689 aa9.31□□□□□ -0.92
GDNF-202ENST00000344622 CCDC136Q96JN2 1154 aa9.31□□□□□ -0.92
GDNF-202ENST00000344622 SOS1Q07889 1333 aaPredicted RBP9.31□□□□□ -0.92
GDNF-202ENST00000344622 KIF16BQ96L93 1317 aa9.31□□□□□ -0.92
GDNF-202ENST00000344622 PHF14O94880 888 aa9.31□□□□□ -0.92
GDNF-202ENST00000344622 CAMTA2O94983 1202 aa9.31□□□□□ -0.92
GDNF-202ENST00000344622 ANKRD13DQ6ZTN6 518 aa9.3□□□□□ -0.92
GDNF-202ENST00000344622 ANKRD31Q8N7Z5 1873 aa9.3□□□□□ -0.92
GDNF-202ENST00000344622 NEURL1BA8MQ27 555 aa9.3□□□□□ -0.92
GDNF-202ENST00000344622 KSR2Q6VAB6 950 aa9.3□□□□□ -0.92
GDNF-202ENST00000344622 KLHDC4Q8TBB5 520 aa9.3□□□□□ -0.92
GDNF-202ENST00000344622 ARHGEF1Q92888 912 aaKnown RBP9.3□□□□□ -0.92
GDNF-202ENST00000344622 MYD88Q99836 296 aa9.3□□□□□ -0.92
GDNF-202ENST00000344622 PTPRCP08575 1304 aa9.3□□□□□ -0.92
GDNF-202ENST00000344622 COL15A1P39059 1388 aa9.3□□□□□ -0.92
GDNF-202ENST00000344622 WTIPA6NIX2 430 aaPredicted RBP9.3□□□□□ -0.92
GDNF-202ENST00000344622 DNAAF4Q8WXU2 420 aa9.3□□□□□ -0.92
GDNF-202ENST00000344622 GPTP24298 496 aa9.29□□□□□ -0.92
GDNF-202ENST00000344622 AKT1S1Q96B36 256 aa9.29□□□□□ -0.92
GDNF-202ENST00000344622 PXDNLA1KZ92 1463 aa9.29□□□□□ -0.92
GDNF-202ENST00000344622 STK31Q9BXU1 1019 aa9.29□□□□□ -0.92
GDNF-202ENST00000344622 CCDC87Q9NVE4 849 aa9.29□□□□□ -0.92
GDNF-202ENST00000344622 PPP4R2Q9NY27 417 aa9.29□□□□□ -0.92
GDNF-202ENST00000344622 HYPKQ9NX55 129 aa9.29□□□□□ -0.92
GDNF-202ENST00000344622 GNPATO15228 680 aa9.28□□□□□ -0.92
GDNF-202ENST00000344622 FTSJ3Q8IY81 847 aaKnown RBP9.28□□□□□ -0.92
GDNF-202ENST00000344622 SUCLG2Q96I99 432 aa9.28□□□□□ -0.92
GDNF-202ENST00000344622 A0A1B0GUL6 1792 aa9.28□□□□□ -0.92
GDNF-202ENST00000344622 TBC1D9BQ66K14 1250 aa9.28□□□□□ -0.92
GDNF-202ENST00000344622 CARMIL3Q8ND23 1372 aa9.28□□□□□ -0.92
GDNF-202ENST00000344622 USPL1Q5W0Q7 1092 aa9.28□□□□□ -0.92
GDNF-202ENST00000344622 FAM89AQ96GI7 184 aa9.28□□□□□ -0.92
GDNF-202ENST00000344622 METTL22Q9BUU2 404 aaPredicted RBP9.28□□□□□ -0.92
GDNF-202ENST00000344622 LRRFIP2Q9Y608 721 aaKnown RBP9.28□□□□□ -0.92
GDNF-202ENST00000344622 CACNA1SQ13698 1873 aa9.27□□□□□ -0.92
GDNF-202ENST00000344622 PLSCR1O15162 318 aa9.27□□□□□ -0.92
GDNF-202ENST00000344622 PNPLA7Q6ZV29 1317 aa9.27□□□□□ -0.93
GDNF-202ENST00000344622 GCKRQ14397 625 aa9.27□□□□□ -0.93
GDNF-202ENST00000344622 CEP85Q6P2H3 762 aa9.27□□□□□ -0.93
GDNF-202ENST00000344622 DZIP3Q86Y13 1208 aaKnown RBP9.27□□□□□ -0.93
GDNF-202ENST00000344622 NUTM1Q86Y26 1132 aa9.27□□□□□ -0.93
GDNF-202ENST00000344622 ANKRD44Q8N8A2 993 aa9.27□□□□□ -0.93
GDNF-202ENST00000344622 PLBD2Q8NHP8 589 aa9.27□□□□□ -0.93
GDNF-202ENST00000344622 MAP3K15Q6ZN16 1313 aa9.27□□□□□ -0.93
GDNF-202ENST00000344622 CNTNAP4Q9C0A0 1308 aa9.27□□□□□ -0.93
GDNF-202ENST00000344622 COL11A2P13942 1736 aaPredicted RBP9.27□□□□□ -0.93
GDNF-202ENST00000344622 IL6STP40189 918 aaPredicted RBP9.27□□□□□ -0.93
GDNF-202ENST00000344622 SUSD4Q5VX71 490 aa9.27□□□□□ -0.93
GDNF-202ENST00000344622 COL23A1Q86Y22 540 aaPredicted RBP9.27□□□□□ -0.93
GDNF-202ENST00000344622 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP9.26□□□□□ -0.93
GDNF-202ENST00000344622 FAM177BA6PVY3 158 aa9.26□□□□□ -0.93
GDNF-202ENST00000344622 ISCA1Q9BUE6 129 aa9.26□□□□□ -0.93
GDNF-202ENST00000344622 TSHZ2Q9NRE2 1034 aa9.26□□□□□ -0.93
GDNF-202ENST00000344622 FOXO4P98177 505 aa9.26□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms