RNA–Protein interactions for RNA: ENST00000344391.9

CEACAM1-202, Transcript of carcinoembryonic antigen related cell adhesion molecule 1, humanhuman

TSL 1 (best)

Gene CEACAM1, Length 1,619 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CEACAM1-202ENST00000344391 TRIM37O94972 964 aa20.57■□□□□ 0.88
CEACAM1-202ENST00000344391 LINS1Q8NG48 757 aa20.57■□□□□ 0.88
CEACAM1-202ENST00000344391 IGHDP01880 384 aa20.56■□□□□ 0.88
CEACAM1-202ENST00000344391 USP44Q9H0E7 712 aa20.56■□□□□ 0.88
CEACAM1-202ENST00000344391 C1orf115Q9H7X2 142 aa20.56■□□□□ 0.88
CEACAM1-202ENST00000344391 TAF1LQ8IZX4 1826 aa20.56■□□□□ 0.88
CEACAM1-202ENST00000344391 GNAI3P08754 354 aa20.56■□□□□ 0.88
CEACAM1-202ENST00000344391 NEXNQ0ZGT2 675 aa20.56■□□□□ 0.88
CEACAM1-202ENST00000344391 LINC00116Q8NCU8 138 aa20.56■□□□□ 0.88
CEACAM1-202ENST00000344391 IBTKQ9P2D0 1353 aaPredicted RBP20.55■□□□□ 0.88
CEACAM1-202ENST00000344391 IGKV5-2P06315 115 aa20.55■□□□□ 0.88
CEACAM1-202ENST00000344391 EIF5P55010 431 aaKnown RBP20.55■□□□□ 0.88
CEACAM1-202ENST00000344391 CENPQQ7L2Z9 268 aaPredicted RBP20.55■□□□□ 0.88
CEACAM1-202ENST00000344391 CCNL1Q9UK58 526 aaPredicted RBP20.55■□□□□ 0.88
CEACAM1-202ENST00000344391 ZNF330Q9Y3S2 320 aaPredicted RBP20.55■□□□□ 0.88
CEACAM1-202ENST00000344391 KCNQ4P56696 695 aa20.54■□□□□ 0.88
CEACAM1-202ENST00000344391 CWF19L2Q2TBE0 894 aaKnown RBP20.54■□□□□ 0.88
CEACAM1-202ENST00000344391 MYD88Q99836 296 aa20.54■□□□□ 0.88
CEACAM1-202ENST00000344391 RWDD1Q9H446 243 aaPredicted RBP20.54■□□□□ 0.88
CEACAM1-202ENST00000344391 AFDNP55196 1824 aaKnown RBP20.54■□□□□ 0.88
CEACAM1-202ENST00000344391 HDAC1Q13547 482 aaPredicted RBP20.53■□□□□ 0.88
CEACAM1-202ENST00000344391 ZBTB3Q9H5J0 574 aa20.53■□□□□ 0.88
CEACAM1-202ENST00000344391 CNTNAP4Q9C0A0 1308 aa20.53■□□□□ 0.88
CEACAM1-202ENST00000344391 KIF6Q6ZMV9 814 aa20.53■□□□□ 0.88
CEACAM1-202ENST00000344391 ILDR1Q86SU0 546 aaPredicted RBP20.53■□□□□ 0.88
CEACAM1-202ENST00000344391 NEURL1BA8MQ27 555 aa20.52■□□□□ 0.88
CEACAM1-202ENST00000344391 GNAI2P04899 355 aa20.52■□□□□ 0.88
CEACAM1-202ENST00000344391 RC3H1Q5TC82 1133 aaKnown RBP20.52■□□□□ 0.88
CEACAM1-202ENST00000344391 MAP3K15Q6ZN16 1313 aa20.51■□□□□ 0.87
CEACAM1-202ENST00000344391 NPM2Q86SE8 214 aaKnown RBP20.51■□□□□ 0.87
CEACAM1-202ENST00000344391 NBPF7P0C2Y1 421 aaPredicted RBP20.5■□□□□ 0.87
CEACAM1-202ENST00000344391 UBTFL1P0CB47 393 aaPredicted RBP20.5■□□□□ 0.87
CEACAM1-202ENST00000344391 SIRT2Q8IXJ6 389 aa20.5■□□□□ 0.87
CEACAM1-202ENST00000344391 RPAP2Q8IXW5 612 aaPredicted RBP20.5■□□□□ 0.87
CEACAM1-202ENST00000344391 NUP98P52948 1817 aa20.5■□□□□ 0.87
CEACAM1-202ENST00000344391 GCKRQ14397 625 aa20.49■□□□□ 0.87
CEACAM1-202ENST00000344391 CEP85Q6P2H3 762 aa20.49■□□□□ 0.87
CEACAM1-202ENST00000344391 DZIP3Q86Y13 1208 aaKnown RBP20.49■□□□□ 0.87
CEACAM1-202ENST00000344391 ANKRD44Q8N8A2 993 aa20.49■□□□□ 0.87
CEACAM1-202ENST00000344391 C9orf78Q9NZ63 289 aaPredicted RBP20.49■□□□□ 0.87
CEACAM1-202ENST00000344391 UTYO14607 1347 aa20.49■□□□□ 0.87
CEACAM1-202ENST00000344391 ATP5J2-PTCD1G3V325 749 aa20.49■□□□□ 0.87
CEACAM1-202ENST00000344391 ARXQ96QS3 562 aa20.49■□□□□ 0.87
CEACAM1-202ENST00000344391 LRRC4BQ9NT99 713 aa20.49■□□□□ 0.87
CEACAM1-202ENST00000344391 ERVV-1B6SEH8 477 aa20.48■□□□□ 0.87
CEACAM1-202ENST00000344391 GRM8O00222 908 aa20.48■□□□□ 0.87
CEACAM1-202ENST00000344391 TCIRG1Q13488 830 aa20.48■□□□□ 0.87
CEACAM1-202ENST00000344391 SLC27A3Q5K4L6 730 aa20.48■□□□□ 0.87
CEACAM1-202ENST00000344391 GIGYF2Q6Y7W6 1299 aaKnown RBP20.48■□□□□ 0.87
CEACAM1-202ENST00000344391 TBC1D2BQ9UPU7 963 aa20.48■□□□□ 0.87
CEACAM1-202ENST00000344391 LRRFIP2Q9Y608 721 aaKnown RBP20.48■□□□□ 0.87
CEACAM1-202ENST00000344391 C4BP0C0L5 1744 aa20.48■□□□□ 0.87
CEACAM1-202ENST00000344391 TNS1Q9HBL0 1735 aaKnown RBP20.48■□□□□ 0.87
CEACAM1-202ENST00000344391 ANKRD36CQ5JPF3 1778 aa20.48■□□□□ 0.87
CEACAM1-202ENST00000344391 COL15A1P39059 1388 aa20.47■□□□□ 0.87
CEACAM1-202ENST00000344391 ISCA1Q9BUE6 129 aa20.47■□□□□ 0.87
CEACAM1-202ENST00000344391 PLSCR1O15162 318 aa20.46■□□□□ 0.87
CEACAM1-202ENST00000344391 HLFQ16534 295 aa20.46■□□□□ 0.87
CEACAM1-202ENST00000344391 RPS6KA4O75676 772 aa20.45■□□□□ 0.87
CEACAM1-202ENST00000344391 TRIM28Q13263 835 aaKnown RBP20.45■□□□□ 0.87
CEACAM1-202ENST00000344391 CCDC191Q8NCU4 936 aa20.45■□□□□ 0.87
CEACAM1-202ENST00000344391 HDAC5Q9UQL6 1122 aa20.45■□□□□ 0.87
CEACAM1-202ENST00000344391 A0A087WZG4 1122 aa20.45■□□□□ 0.86
CEACAM1-202ENST00000344391 APBA3O96018 575 aa20.45■□□□□ 0.86
CEACAM1-202ENST00000344391 HSP90AB3PQ58FF7 597 aa20.45■□□□□ 0.86
CEACAM1-202ENST00000344391 CWC25Q9NXE8 425 aaPredicted RBP20.45■□□□□ 0.86
CEACAM1-202ENST00000344391 BCORQ6W2J9 1755 aa20.44■□□□□ 0.86
CEACAM1-202ENST00000344391 CAMTA2O94983 1202 aa20.44■□□□□ 0.86
CEACAM1-202ENST00000344391 TXNRD1Q16881 649 aa20.44■□□□□ 0.86
CEACAM1-202ENST00000344391 SMC5Q8IY18 1101 aa20.44■□□□□ 0.86
CEACAM1-202ENST00000344391 PROM2Q8N271 834 aa20.44■□□□□ 0.86
CEACAM1-202ENST00000344391 ATP8B2P98198 1209 aa20.43■□□□□ 0.86
CEACAM1-202ENST00000344391 RGPD3A6NKT7 1758 aaPredicted RBP20.42■□□□□ 0.86
CEACAM1-202ENST00000344391 RGPD4Q7Z3J3 1758 aa20.42■□□□□ 0.86
CEACAM1-202ENST00000344391 H7C1W4 665 aa20.42■□□□□ 0.86
CEACAM1-202ENST00000344391 GNPATO15228 680 aa20.42■□□□□ 0.86
CEACAM1-202ENST00000344391 CASP7P55210 303 aa20.42■□□□□ 0.86
CEACAM1-202ENST00000344391 KAZALD1Q96I82 304 aa20.42■□□□□ 0.86
CEACAM1-202ENST00000344391 SUCLG2Q96I99 432 aa20.42■□□□□ 0.86
CEACAM1-202ENST00000344391 RTCBQ9Y3I0 505 aaKnown RBP20.42■□□□□ 0.86
CEACAM1-202ENST00000344391 HMMRO75330 724 aa20.41■□□□□ 0.86
CEACAM1-202ENST00000344391 HMGB2P26583 209 aaKnown RBP20.41■□□□□ 0.86
CEACAM1-202ENST00000344391 GCC1Q96CN9 775 aa20.41■□□□□ 0.86
CEACAM1-202ENST00000344391 DCTPP1Q9H773 170 aa20.41■□□□□ 0.86
CEACAM1-202ENST00000344391 UBR3Q6ZT12 1888 aa20.4■□□□□ 0.86
CEACAM1-202ENST00000344391 PNMA6EA0A0J9YXQ4 647 aa20.4■□□□□ 0.86
CEACAM1-202ENST00000344391 UBE3BQ7Z3V4 1068 aa20.4■□□□□ 0.86
CEACAM1-202ENST00000344391 ZNF34Q8IZ26 560 aa20.4■□□□□ 0.86
CEACAM1-202ENST00000344391 AK7Q96M32 723 aa20.4■□□□□ 0.86
CEACAM1-202ENST00000344391 RGL2O15211 777 aa20.39■□□□□ 0.86
CEACAM1-202ENST00000344391 MTX1Q13505 466 aa20.39■□□□□ 0.86
CEACAM1-202ENST00000344391 SMIM5Q71RC9 77 aa20.39■□□□□ 0.86
CEACAM1-202ENST00000344391 NLRP10Q86W26 655 aa20.39■□□□□ 0.86
CEACAM1-202ENST00000344391 AMIGO3Q86WK7 504 aa20.39■□□□□ 0.86
CEACAM1-202ENST00000344391 SCN7AQ01118 1682 aa20.39■□□□□ 0.85
CEACAM1-202ENST00000344391 GPTP24298 496 aa20.38■□□□□ 0.85
CEACAM1-202ENST00000344391 PPP1R42Q7Z4L9 355 aa20.38■□□□□ 0.85
CEACAM1-202ENST00000344391 SSH3Q8TE77 659 aa20.38■□□□□ 0.85
CEACAM1-202ENST00000344391 JARID2Q92833 1246 aaPredicted RBP20.38■□□□□ 0.85
CEACAM1-202ENST00000344391 CLEC4GQ6UXB4 293 aa20.38■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms